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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM482
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 227:
/----- GSBRNA2T00155884001 [Brassica napus] (2)
/-100+
| \----- XP_013601684.1 [Brassica oleracea] (142)
/-100+
| | /----- GSBRNA2T00122033001 [Brassica napus] (93)
| \-100+
/---100---+ \----- XP_009124032.1 [Brassica rapa] (132)
| |
| | /----- Rsa1.0_01944.1_g00005.1 [Raphanus sativus] (55)
| \---100---+
| \----- RrC2517_p6 [Raphanus raphanistrum] (56)
|
| /----- XP_009116400.1 [Brassica rapa] (22)
| /-100+
| | \----- GSBRNA2T00122035001 [Brassica napus] (30)
| /-100+
| | | /----- GSBRNA2T00014555001 [Brassica napus] (36)
| | \-99-+
| /-100+ \----- XP_013603898.1 [Brassica oleracea] (88)
| | |
| | | /----- Rsa1.0_01944.1_g00001.1 [Raphanus sativus] (58)
| | \---100---+
| | \----- RrC18427_p1 [Raphanus raphanistrum] (125)
| |
/-76-+-99-+ /----- GSBRNA2T00142644001 [Brassica napus] (45)
| | | /-100+
| | | | \----- XP_013596868.1 [Brassica oleracea] (120)
| | | /-100+
| | | | | /----- XP_009102593.1 [Brassica rapa] (59)
| | | | \-100+
| | \-100+ \----- GSBRNA2T00128359001 [Brassica napus] (113)
| | |
| | | /----- RrC7233_p1 [Raphanus raphanistrum] (49)
| | \---100---+
| | \----- Rsa1.0_05924.1_g00001.1 [Raphanus sativus] (131)
| |
| | /----- XP_009116401.1 [Brassica rapa] (33)
| | /-100+
| | | \----- GSBRNA2T00122034001 [Brassica napus] (110)
/-100-+ | /-100+
| | | | | /----- GSBRNA2T00155885001 [Brassica napus] (120)
| | | | \-100+
| | \---100---+ \----- XP_013603891.1 [Brassica oleracea] (137)
| | |
| | | /----- RrC23068_p1 [Raphanus raphanistrum] (51)
| | \---100---+
| | \----- Rsa1.0_01944.1_g00003.1 [Raphanus sativus] (134)
| |
| | /----- GSBRNA2T00128360001 [Brassica napus] (42)
| | /-100+
/-95-+ | | \----- XP_009102594.1 [Brassica rapa] (170)
| | | /-100+
| | | | | /----- GSBRNA2T00011390001 [Brassica napus] (123)
| | | | \-88-+
| | \------100-----+ \----- XP_013597233.1 [Brassica oleracea] (148)
| | |
| | | /----- Rsa1.0_01167.1_g00005.1 [Raphanus sativus] (143)
| | \---100---+
| | \----- RrC2601_p2 [Raphanus raphanistrum] (147)
| |
/-100+ \------------------------------------ 676785262 [Sisymbrium irio] (146)
| |
| | /----- GSBRNA2T00098842001 [Brassica napus] (41)
| | /-100+
| | | \----- XP_009105533.1 [Brassica rapa] (96)
| | /---100---+
| | | \---------- XP_013590939.1 [Brassica oleracea] (91)
| | |
| | | /----- Rsa1.0_07076.1_g00001.1 [Raphanus sativus] (48)
| \---------100--------+ /---100---+
| | | \----- RrC186_p2 [Raphanus raphanistrum] (117)
| | |
| \-100+ /----- XP_009104034.1 [Brassica rapa] (89)
| | /-97-+
| | | \----- GSBRNA2T00098841001 [Brassica napus] (112)
| \-100+
| \---------- XP_013591139.1 [Brassica oleracea] (115)
|
| /----- RrC6757_p1 [Raphanus raphanistrum] (7)
| /--------100--------+
| | \----- Rsa1.0_02882.1_g00001.1 [Raphanus sativus] (80)
| |
| | /----- GSBRNA2T00126251001 [Brassica napus] (31)
| /-99-+ /------97------+
| | | | \----- XP_009139054.1 [Brassica rapa] (136)
| | | |
| | | | /---------- GSBRNA2T00091489001 [Brassica napus] (32)
| | \-89-+ |
| | | /-100+ /----- XP_013615108.1 [Brassica oleracea] (57)
| | | | \-97-+
| /--57-+ | | \----- GSBRNA2T00069228001 [Brassica napus] (129)
| | | \-63-+
/-82-+ | | |--------------- GSBRNA2T00126258001 [Brassica napus] (66)
| | | | |
| | /-82-+ | \--------------- GSBRNA2T00087298001 [Brassica napus] (110)
| | | | |
| | | | \------------------------------ KFK34930.1 [Arabis alpina] (75)
| | | |
| | | \------------------------------------ 676785260 [Sisymbrium irio] (119)
| | |
| | | /----- Thhalv10006191m [Eutrema salsugineum] (11)
| | |----------------100----------------+
| | | \----- Thhalv10006189m [Eutrema salsugineum] (68)
| |-61-+
| | | /---------- GSBRNA2T00087296001 [Brassica napus] (62)
| | | |
| | | /---100---+ /----- XP_009139056.1 [Brassica rapa] (67)
| | | | \-100+
| | | | \----- GSBRNA2T00126250001 [Brassica napus] (138)
| | | |
| | | | /----- XP_009139052.1 [Brassica rapa] (82)
| | \---------93---------+ /-100+
| | | | \----- GSBRNA2T00126257001 [Brassica napus] (85)
| | | /-100+
| | | | \---------- 676785258 [Sisymbrium irio] (141)
| | \-100+
| | \--------------- Tp5g05600 [Thellungiella parvula] (150)
/-74-+ |
| | | /----- Araha.49678s0001.1.p [Arabidopsis halleri] (9)
| | | /-94-+
| | | | \----- 324207 [Arabidopsis lyrata] (34)
| | | /-100+
| | | | \---------- AT3G56980.1 [Arabidopsis thaliana] (39)
| | | |
| | \--------------100-------------+ /----- Cagra.0578s0028.1.p [Capsella grandiflora] (29)
| | | /-100+
| | | | \----- Carubv10017770m [Capsella rubella] (149)
| | \-100+
| | \---------- Bostr.20505s0055.1.p [Boechera stricta] (98)
| |
| | /----- GSBRNA2T00126249001 [Brassica napus] (6)
/-57-+ | |
| | | /-100+----- GSBRNA2T00087293001 [Brassica napus] (13)
| | | | |
| | | /-100+ \----- XP_009139058.1 [Brassica rapa] (133)
| | | | |
| | | /-100+ \---------- GSBRNA2T00087295001 [Brassica napus] (130)
| | | | |
| | |--------------72--------------+ \--------------- XP_013634961.1 [Brassica oleracea] (46)
| | | |
| | | \-------------------- 676785256 [Sisymbrium irio] (60)
| | |
| | \--------------------------------------------------- Tp5g05610 [Thellungiella parvula] (44)
| |
| \-------------------------------------------------------- Thhalv10006491m [Eutrema salsugineum] (86)
--50-+
| /---------- AT3G56970.1 [Arabidopsis thaliana] (4)
| |
| /---100---+ /----- Araha.0887s0006.1.p [Arabidopsis halleri] (43)
| | \-100+
| | \----- 486140 [Arabidopsis lyrata] (90)
| |
| | /----- Csa06g031690.1 [Camelina sativa] (8)
| /-67-+ /-100+
| | | | \----- Csa04g043360.1 [Camelina sativa] (140)
| | | /-100+
| | | | \---------- Csa09g069400.1 [Camelina sativa] (14)
| | \-96-+
\----------------100----------------+ | /----- Carubv10019130m [Capsella rubella] (79)
| \---100---+
| \----- Cagra.0578s0027.1.p [Capsella grandiflora] (180)
|
\------------------------- Bostr.20505s0056.1.p [Boechera stricta] (130)
Subtree rooted at node 281:
/---------- (227)
|
/-------------------76-------------------+ /----- AA61G00160 [Aethionema arabicum] (25)
| \-100+
| \----- AA61G00163 [Aethionema arabicum] (114)
|
| /----- XP_010543098.1 [Tarenaya hassleriana] (3)
|----------------------85---------------------+
| \----- XP_010554771.1 [Tarenaya hassleriana] (16)
|
| /------------------------- Tp6g38600 [Thellungiella parvula] (10)
| |
| | /-------------------- 676718060 [Sisymbrium irio] (12)
| /-53-+ |
| | | | /----- GSBRNA2T00134310001 [Brassica napus] (15)
| | | | /-66-+
| | \-63-+ | \----- XP_013626414.1 [Brassica oleracea] (17)
| | | /-100+
| | | | \---------- XP_009130802.1 [Brassica rapa] (77)
| | \-100+
| | | /----- Rsa1.0_00285.1_g00009.1 [Raphanus sativus] (61)
| | \---100---+
| | \----- RrC16589_p1 [Raphanus raphanistrum] (76)
| |
| | /----- Araha.30177s0007.1.p [Arabidopsis halleri] (19)
| | /-93-+
| /--61-+ | \----- 860820 [Arabidopsis lyrata] (100)
| | | /---100---+
| | | | \---------- AT5G04150.1 [Arabidopsis thaliana] (152)
| | | |
| | | | /----- Csa20g005340.1 [Camelina sativa] (21)
| | | | |
| | | | /-100+----- Csa13g006180.1 [Camelina sativa] (52)
| | | /-100+ | |
| | | | | | \----- Csa08g060370.1 [Camelina sativa] (64)
| /-100+ | | | /-80-+
/-68-+ | | | | | | | /----- Carubv10001734m [Capsella rubella] (47)
| | | | | | | | \-100+
| | | | \-74-+ \-100+ \----- Cagra.0878s0006.1.p [Capsella grandiflora] (72)
| | | | | |
| | | | | \--------------- Bostr.2128s0031.1.p [Boechera stricta] (150)
| | /-86-+ | |
| | | | | \------------------------- Thhalv10014371m [Eutrema salsugineum] (87)
| | | | |
| | | | \------------------------------------ KFK24862.1 [Arabis alpina] (139)
| | | |
| | | \----------------------------------------- XP_010543534.1 [Tarenaya hassleriana] (151)
| | |
| | | /----- Cotton_A_01739_BGI-A2_v1.0 [Gossypium arboreum] (23)
| | | /-100+
| | | | \----- Gh_A09G0994 [Gossypium hirsutum] (71)
| | | /-100+
| | | | \---------- Gorai.006G120300.1 [Gossypium raimondii] (24)
| | | /-100+
| | | | \--------------- Gh_D09G1014 [Gossypium hirsutum] (153)
| | | |
| | | | /----- Cotton_A_01066_BGI-A2_v1.0 [Gossypium arboreum] (28)
| | | | /-100+
| | | | | \----- Gh_A05G0570 [Gossypium hirsutum] (190)
| | | /-100+---100---+
| | | | | | /----- Gh_D05G0699 [Gossypium hirsutum] (160)
| | | | | \-100+
| | | | | \----- Gorai.009G073100.1 [Gossypium raimondii] (118)
| | | | |
| | | | \-------------------- Thecc1EG040699t1 [Theobroma cacao] (97)
| | | /-88-+
| | | | | /----- Eucgr.A02250.1.p [Eucalyptus grandis] (37)
| | | | | /---100---+
| | | | | | \----- EcS540524.10 [Eucalyptus camaldulensis] (127)
| \-54-+ | | |
| | | \---100---+ /----- EcC004408.10 [Eucalyptus camaldulensis] (63)
| | | | /-99-+
| | | | | \----- Eucgr.B01226.1.p [Eucalyptus grandis] (121)
/-51-+ | | \-100+
| | | | \---------- Eucgr.B01225.1.p [Eucalyptus grandis] (73)
| | | |
| | |-------78------+ /---------- Neem_859_f_1 [Azadirachta indica] (35)
| | | | |
| | | | /-100+ /----- Neem_1537_f_2 [Azadirachta indica] (54)
| | | | | \-100+
| | | | | \----- Neem_40430_f_1 [Azadirachta indica] (78)
| | | | /-95-+
| | | | | | /----- orange1.1g025477m [Citrus sinensis] (124)
| | | | | \---100---+
| | | | | \----- Ciclev10006413m [Citrus clementina] (128)
| | | | |
| | | | | /----- Gorai.007G353000.1 [Gossypium raimondii] (81)
| | | \----85---+ /-54-+
| | | | | \----- Gh_D11G3081 [Gossypium hirsutum] (111)
| | | | /-100+
| | | | | | /----- Gh_A11G2752 [Gossypium hirsutum] (84)
| | | | | \-90-+
| | | \-100+ \----- Cotton_A_14318_BGI-A2_v1.0 [Gossypium arboreum] (92)
| | | |
| | | \--------------- Thecc1EG024315t1 [Theobroma cacao] (135)
--68-+ | |
| | \---------------------------------------------- evm.model.supercontig_5.180 [Carica papaya] (140)
| |
| | /----- Carubv10023940m [Capsella rubella] (5)
| | /---100---+
| | | \----- Cagra.1642s0089.1.p [Capsella grandiflora] (70)
| | |
| | /-100+ /----- Csa06g047140.1 [Camelina sativa] (50)
| | | | /-94-+
| | | | | \----- Csa04g055660.1 [Camelina sativa] (94)
| | /-100+ \-100+
| | | | \---------- Csa05g011400.1 [Camelina sativa] (69)
| | | |
| | | \-------------------- Bostr.9345s0006.1.p [Boechera stricta] (18)
| \--------------97--------------+
| | /----- 870571 [Arabidopsis lyrata] (27)
| | /-100+
| | | \----- Araha.13526s0009.1.p [Arabidopsis halleri] (126)
| \------100-----+
| \---------- AT2G41240.1 [Arabidopsis thaliana] (122)
|
\------------------------------------------------------------- Thhalv10017167m [Eutrema salsugineum] (38)
Root part of tree:
/------------------------------------------------------------------ GSBRNA2T00105356001 [Brassica napus] (1)
|
|------------------------------------------------------------------ GSBRNA2T00027961001 [Brassica napus] (116)
|
| /-------- (281)
| /---66--+
| | \-------- Tp4g23560 [Thellungiella parvula] (95)
| /-----------68-----------+
| | \---------------- 676756222 [Sisymbrium irio] (99)
| |
| | /-------- XP_009141976.1 [Brassica rapa] (20)
+ | /--100--+
| /---71--+ | \-------- GSBRNA2T00123239001 [Brassica napus] (26)
| | | /---59---+
| | | | \---------------- XP_013635306.1 [Brassica oleracea] (145)
| | | /--100--+
| | | | \------------------------- GSBRNA2T00084613001 [Brassica napus] (144)
| | \--100--+
| /---100--+ | /-------- Rsa1.0_18971.1_g00001.1 [Raphanus sativus] (40)
| | | \-----------100----------+
| | | \-------- RrC12416_p1 [Raphanus raphanistrum] (74)
| | |
\--100--+ | /-------- GSBRNA2T00024289001 [Brassica napus] (53)
| \-------------------95-------------------+
| \-------- XP_013635081.1 [Brassica oleracea] (83)
|
\---------------------------------------------------------- XP_009142733.1 [Brassica rapa] (65)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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