![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM4849
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 94:
/---------- GSBRNA2T00045527001 [Brassica napus] (4)
|
/-100+ /----- XP_009128203.1 [Brassica rapa] (14)
| \-100+
| \----- GSBRNA2T00082955001 [Brassica napus] (43)
/-----------------100----------------+
| | /----- Rsa1.0_00167.1_g00020.1 [Raphanus sativus] (28)
| \---100---+
| \----- RrC1940_p5 [Raphanus raphanistrum] (49)
|
| /---------- Csa09g082580.1 [Camelina sativa] (9)
| |
| /-100+ /----- Csa16g041060.1 [Camelina sativa] (24)
| | \-61-+
| | \----- Csa07g048450.1 [Camelina sativa] (39)
| /--95-+
| | | /----- Carubv10020016m [Capsella rubella] (40)
| | \---100---+
| /-99-+ \----- Cagra.20992s0002.1.p [Capsella grandiflora] (52)
| | |
| | \--------------------- Bostr.20129s0126.1.p [Boechera stricta] (32)
/-54-+ |
| | /-100+ /----- Araha.11451s0008.1.p [Arabidopsis halleri] (10)
| | | | /-100+
| | | | | \----- 895569 [Arabidopsis lyrata] (27)
| | /-51-+ \------100------+
| | | | \---------- AT1G76880.1 [Arabidopsis thaliana] (45)
| | | |
| | /-53-+ \------------------------------- Thhalv10018297m [Eutrema salsugineum] (20)
| | | |
| | /-58-+ \------------------------------------ Tp5g32000 [Thellungiella parvula] (41)
| | | |
| | | \----------------------------------------- 676741296 [Sisymbrium irio] (48)
| | |
| | | /----- RrC16491_p2 [Raphanus raphanistrum] (13)
| | | /---100---+
| | | | \----- Rsa1.0_01036.1_g00010.1 [Raphanus sativus] (47)
| \--53-+ |
| | /-100-+ /----- XP_009106347.1 [Brassica rapa] (25)
/-100+ | | | /-100+
| | | | | | \----- GSBRNA2T00146565001 [Brassica napus] (30)
| | | | \-100+
| | | | | /----- GSBRNA2T00147827001 [Brassica napus] (36)
| | \-----------91-----------+ \-100+
| | | \----- XP_013592300.1 [Brassica oleracea] (38)
| | |
| | | /----- KFK42101.1 [Arabis alpina] (17)
| | \-------93------+
| | \----- AA31G00286 [Aethionema arabicum] (19)
| |
| | /----- GSBRNA2T00099318001 [Brassica napus] (8)
--59-+ | /-100+
| | | \----- XP_009104654.1 [Brassica rapa] (44)
| | /-100+
| | | | /----- GSBRNA2T00091264001 [Brassica napus] (15)
| | | \-100+
| \-------------------100-------------------+ \----- XP_013591974.1 [Brassica oleracea] (22)
| |
| | /----- RrC4755_p1 [Raphanus raphanistrum] (16)
| \---100---+
| \----- Rsa1.0_04285.1_g00001.1 [Raphanus sativus] (23)
|
| /----- XP_010531649.1 [Tarenaya hassleriana] (11)
\---------------------------100--------------------------+
\----- XP_010539733.1 [Tarenaya hassleriana] (35)
Root part of tree:
/------------------------------------------------------------------- evm.model.supercontig_21.195 [Carica papaya] (1)
|
|------------------------------------------------------------------- Neem_9967_f_1 [Azadirachta indica] (37)
|
| /------- Gorai.002G231500.1 [Gossypium raimondii] (2)
| /---95--+
| | \------- Gh_D01G1936 [Gossypium hirsutum] (6)
| /--100-+
| | | /------- Cotton_A_15314_BGI-A2_v1.0 [Gossypium arboreum] (31)
| | \--100--+
| | \------- Gh_A01G1687 [Gossypium hirsutum] (53)
| /---83--+
| | | /------- Cotton_A_12729_BGI-A2_v1.0 [Gossypium arboreum] (3)
| | | /--100--+
| | | | \------- Gh_A05G2066 [Gossypium hirsutum] (7)
| | \--100-+
+ /--100-+ | /------- Gh_D05G2306 [Gossypium hirsutum] (29)
| | | \--100--+
| | | \------- Gorai.009G253700.1 [Gossypium raimondii] (34)
| | |
| /---95--+ \------------------------------ Thecc1EG035565t1 [Theobroma cacao] (42)
| | |
| | | /------- Neem_4111_f_1 [Azadirachta indica] (5)
| | \--------------99-------------+
| /--100-+ \------- evm.model.supercontig_21.194 [Carica papaya] (50)
| | |
| | | /------- (94)
| /--100--+ \-----------------100-----------------+
| | | \------- XP_010537279.1 [Tarenaya hassleriana] (46)
| | |
| | \---------------------------------------------------- Eucgr.F04239.1.p [Eucalyptus grandis] (12)
\--97--+
| /---------------------- Thecc1EG035571t1 [Theobroma cacao] (18)
| |
| | /------- Gh_D05G2307 [Gossypium hirsutum] (21)
\-----------------100-----------------+ /--100--+
| | \------- Gorai.009G253900.1 [Gossypium raimondii] (33)
\--100-+
| /------- Gh_A05G2067 [Gossypium hirsutum] (26)
\--100--+
\------- Cotton_A_12728_BGI-A2_v1.0 [Gossypium arboreum] (51)
|




