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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM491
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 253:
/----------------------------------------- AA32G00513 [Aethionema arabicum] (3)
|
| /----- Csa16g050920.1 [Camelina sativa] (6)
| /-100+
| | \----- Csa07g060290.1 [Camelina sativa] (72)
| /-100+
| | \---------- Csa05g044470.1 [Camelina sativa] (87)
| |
| /-95-+ /---------- Csa05g024520.1 [Camelina sativa] (57)
| | | |
| | \-97-+ /----- Csa07g010290.1 [Camelina sativa] (112)
| | \-100+
| | \----- Csa16g009060.1 [Camelina sativa] (143)
| /-50-+
| | | /----- Carubv10022676m [Capsella rubella] (9)
| | |------100-----+
| | | \----- Cagra.0352s0025.1.p [Capsella grandiflora] (73)
| /-50-+ |
/----64---+ | | \-------------------- 676788994 [Sisymbrium irio] (88)
| | | |
| | | \------------------------- Bostr.23794s0877.1.p [Boechera stricta] (63)
| | /--50-+
| | | | /----- Araha.67016s0001.1.p [Arabidopsis halleri] (25)
| | | | /-100+
| | | | | \----- 856290 [Arabidopsis lyrata] (49)
| | | \--------100--------+
| | | \---------- AT2G32370.1 [Arabidopsis thaliana] (121)
| | |
| | | /----- GSBRNA2T00085621001 [Brassica napus] (24)
| | | /-100+
| | | | \----- XP_013634882.1 [Brassica oleracea] (115)
| | | /-100+
| | | | | /----- XP_009141216.1 [Brassica rapa] (40)
| | | | \-100+
| | | /-100+ \----- GSBRNA2T00006410001 [Brassica napus] (47)
| \-50-+ | |
| | | | /----- Rsa1.0_01027.1_g00002.1 [Raphanus sativus] (60)
| | /-95-+ \---100---+
| | | | \----- RrC12371_p1 [Raphanus raphanistrum] (78)
| | | |
| | | \-------------------- Tp4g14740 [Thellungiella parvula] (59)
| | |
| | | /----- XP_013634261.1 [Brassica oleracea] (33)
| | /-94-+ /-100+
| | | | | \----- GSBRNA2T00061232001 [Brassica napus] (35)
| | | | /-100+
| | | | | | /----- XP_009143974.1 [Brassica rapa] (126)
| | | | | \-100+
| | | \---100---+ \----- GSBRNA2T00089143001 [Brassica napus] (135)
| \--98-+ |
| | | /----- 676729076 [Sisymbrium irio] (95)
| | \---100---+
| | \----- 676788622 [Sisymbrium irio] (140)
| |
| \------------------------------ Thhalv10017809m [Eutrema salsugineum] (120)
|
| /----- Cotton_A_35739_BGI-A2_v1.0 [Gossypium arboreum] (4)
| /-100+
| | \----- Gh_A03G0957 [Gossypium hirsutum] (114)
| /-100+
| | | /----- Gh_D02G1338 [Gossypium hirsutum] (14)
| | \-95-+
| | \----- Gorai.005G150100.1 [Gossypium raimondii] (54)
| /-67-+
| | | /----- Cotton_A_01049_BGI-A2_v1.0 [Gossypium arboreum] (28)
| | | /-100+
| | | | \----- Gh_A13G0777 [Gossypium hirsutum] (31)
| | \-100+
| | | /----- Gorai.013G100200.2 [Gossypium raimondii] (74)
| /-81-+ \-89-+
| | | \----- Gh_D13G2528 [Gossypium hirsutum] (94)
| | |
| | | /----- Gorai.008G172800.1 [Gossypium raimondii] (81)
| | | /-100+
| | | | \----- Gh_D12G1563 [Gossypium hirsutum] (130)
| /-81-+ \----99---+
| | | | /----- Gh_A12G1446 [Gossypium hirsutum] (131)
| | | \-100+
| | | \----- Cotton_A_40124_BGI-A2_v1.0 [Gossypium arboreum] (142)
| /--80-+ |
| | | \------------------------- Thecc1EG011330t1 [Theobroma cacao] (119)
| | |
| | \------------------------------ evm.model.supercontig_8.223 [Carica papaya] (21)
|------76------+
| | /----- orange1.1g004294m [Citrus sinensis] (12)
| | /-100+
| | | \----- Ciclev10014370m [Citrus clementina] (111)
| \-----------100-----------+
| | /----- Neem_1951_f_2 [Azadirachta indica] (34)
| \-100+
| \----- Neem_27397_f_1 [Azadirachta indica] (98)
|
/-82-+ /----- XP_009118607.1 [Brassica rapa] (5)
| | /---100---+
| | | \----- GSBRNA2T00122062001 [Brassica napus] (42)
| | |
| | | /----- RrC2185_p4 [Raphanus raphanistrum] (48)
| | |----88---+
| | /-98-+ \----- Rsa1.0_16601.1_g00001.1 [Raphanus sativus] (68)
| | | |
| | | | /----- GSBRNA2T00017268001 [Brassica napus] (53)
| | | | /-100+
| | | | | \----- GSBRNA2T00031829001 [Brassica napus] (133)
| | | \-100+
| | | \---------- XP_013605632.1 [Brassica oleracea] (139)
| | |
| | /-82-+ /----- XP_013586641.1 [Brassica oleracea] (32)
| | | | /-100+
| | | | | \----- GSBRNA2T00093202001 [Brassica napus] (100)
| | | | /-91-+
| | | | | | /----- XP_009119177.1 [Brassica rapa] (77)
| | | | | \-96-+
| | | | | \----- GSBRNA2T00086287001 [Brassica napus] (86)
| | /-77-+ \-87-+
| | | | |--------------- Rsa1.0_01043.1_g00010.1 [Raphanus sativus] (55)
| | | | |
| | | | \--------------- RrC969_p7 [Raphanus raphanistrum] (83)
| | | |
| | /--78-+ | /----- Tp_un0024_006 [Thellungiella parvula] (45)
| | | | \--------100--------+
| | | | \----- Tp1g04080 [Thellungiella parvula] (145)
| | /-78-+ |
| | | | \------------------------------ 676760600 [Sisymbrium irio] (82)
| | | |
| | | \------------------------------------ Thhalv10006934m [Eutrema salsugineum] (124)
| | |
| | | /----- Csa17g008510.1 [Camelina sativa] (43)
| | | /-63-+
| | | | \----- Csa14g006500.1 [Camelina sativa] (160)
| | /-78-+ /-100+
/-80-+ | | | | \---------- Csa03g006610.1 [Camelina sativa] (134)
| | | | | /-100+
| | | | | | | /----- Carubv10008621m [Capsella rubella] (65)
| | | | | | \---100---+
| | | | | /-100+ \----- Cagra.1671s0144.1.p [Capsella grandiflora] (117)
| | | | | | |
| | |-74-+ | | \-------------------- Bostr.25219s0446.1.p [Boechera stricta] (61)
| | | | \-------97------+
| | | | | /----- AT1G05230.1 [Arabidopsis thaliana] (91)
| | | | \--------100--------+
| | | | \----- Araha.4851s0007.1.p [Arabidopsis halleri] (97)
| | | |
| | | \---------------------------------------------- AA19G00023 [Aethionema arabicum] (13)
| | |
| | | /----- EcC034584.10 [Eucalyptus camaldulensis] (11)
| | |---------------------100---------------------+
| | | \----- Eucgr.K00800.1.p [Eucalyptus grandis] (141)
| | |
| | | /---------- RrC5826_p3 [Raphanus raphanistrum] (18)
| | | |
| | | /-88-+ /----- XP_010544375.1 [Tarenaya hassleriana] (150)
| | | | \-98-+
| | | | \----- Neem_19838_f_1 [Azadirachta indica] (148)
| | |-----------------69----------------+
| | | | /----- KFK29053.1 [Arabis alpina] (41)
| | | \----81---+
| | | \----- AT5G52170.1 [Arabidopsis thaliana] (110)
--89-+ | |
| | | /----- Thecc1EG025205t1 [Theobroma cacao] (23)
| | |----------------------93---------------------+
| | | \----- XP_009116759.1 [Brassica rapa] (50)
| | |
| | |--------------------------------------------------- RrC4664_p1 [Raphanus raphanistrum] (62)
| | |
| | |--------------------------------------------------- Eucgr.A01715.1.p [Eucalyptus grandis] (64)
| | |
| | \--------------------------------------------------- XP_010522330.1 [Tarenaya hassleriana] (96)
| |
| \-------------------------------------------------------- Eucgr.E04108.1.p [Eucalyptus grandis] (85)
|
| /----- Gh_D06G1607 [Gossypium hirsutum] (10)
| /-100+
| | \----- Gorai.010G177800.1 [Gossypium raimondii] (76)
| /-100+
| | | /----- Cotton_A_38379_BGI-A2_v1.0 [Gossypium arboreum] (75)
| | \-100+
| /-100+ \----- Gh_A06G1283 [Gossypium hirsutum] (113)
| | |
| | \--------------- Thecc1EG030175t1 [Theobroma cacao] (129)
| |
| /-78-+ /----- Neem_30069_f_1 [Azadirachta indica] (20)
| | | /-100+
| | | | \----- Neem_3117_f_1 [Azadirachta indica] (144)
| | \---100---+
\-----------------93----------------+ | /----- Ciclev10014424m [Citrus clementina] (36)
| \-100+
| \----- orange1.1g045292m [Citrus sinensis] (132)
|
\------------------------- evm.model.supercontig_198.17 [Carica papaya] (15)
Subtree rooted at node 265:
/--------------- XP_009114536.1 [Brassica rapa] (2)
|
/-100+ /---------- XP_013611160.1 [Brassica oleracea] (7)
| | |
| \-99-+ /----- GSBRNA2T00094475001 [Brassica napus] (116)
| \-100+
/-100+ \----- GSBRNA2T00157869001 [Brassica napus] (118)
| |
| | /----- RrC4900_p1 [Raphanus raphanistrum] (26)
| \------100-----+
| \----- Rsa1.0_02611.1_g00001.1 [Raphanus sativus] (39)
|
| /----- GSBRNA2T00015660001 [Brassica napus] (22)
/-100+ /-94-+
| | | \----- GSBRNA2T00151602001 [Brassica napus] (93)
| | /-80-+
| | | \---------- XP_013629800.1 [Brassica oleracea] (69)
| | /-66-+
| | | \--------------- XP_009134323.1 [Brassica rapa] (80)
| \-100+
| | /----- Rsa1.0_01368.1_g00003.1 [Raphanus sativus] (127)
/--92-+ \------84------+
| | \----- RrC12713_p1 [Raphanus raphanistrum] (128)
| |
| | /----- Thhalv10028459m [Eutrema salsugineum] (38)
| |-----------76-----------+
| | \----- Tp6g04070 [Thellungiella parvula] (125)
| |
| \------------------------------ 676755876 [Sisymbrium irio] (99)
|
/-100+ /----- Csa13g052770.1 [Camelina sativa] (19)
| | |
| | /-100+----- Csa08g048930.1 [Camelina sativa] (56)
| | | |
| | | \----- Csa02g011120.1 [Camelina sativa] (146)
| | /-96-+
| | | | /----- Cagra.5070s0005.1.p [Capsella grandiflora] (51)
| | | \-100+
/-97-+ | | \----- Carubv10000300m [Capsella rubella] (110)
| | \---------100--------+
| | | /----- Araha.1742s0003.1.p [Arabidopsis halleri] (30)
| | | /-100+
| | | | \----- AT4G04890.1 [Arabidopsis thaliana] (44)
| | \-68-+
| | \---------- Bostr.2983s0029.1.p [Boechera stricta] (130)
/-97-+ |
| | \----------------------------------------- AA6G00252 [Aethionema arabicum] (123)
| |
| | /----- (253)
| | /-89-+
/-100+ | | \----- XP_010538642.1 [Tarenaya hassleriana] (58)
| | \-----------------97----------------+
| | \---------- XP_010529425.1 [Tarenaya hassleriana] (137)
| |
| \--------------------------------------------------- AA57G00375 [Aethionema arabicum] (16)
|
| /----- Carubv10006895m [Capsella rubella] (27)
| /---100---+
/-83-+ | \----- Cagra.3519s0026.1.p [Capsella grandiflora] (90)
| | |
| | /-89-+ /----- Csa12g036460.1 [Camelina sativa] (66)
| | | | /-99-+
| | | | | \----- Csa11g024550.1 [Camelina sativa] (149)
| | /-100+ \-100+
--51-+ | | | \---------- Csa10g021580.1 [Camelina sativa] (67)
| | | |
| \--------------100-------------+ \-------------------- Bostr.10689s0126.1.p [Boechera stricta] (37)
| |
| \------------------------- AT4G21750.1 [Arabidopsis thaliana] (147)
|
\------------------------------------------------------------- Tp7g19920 [Thellungiella parvula] (71)
Root part of tree:
/------------------------------------------------------------------ XP_013598423.1 [Brassica oleracea] (1)
|
|------------------------------------------------------------------ GSBRNA2T00156948001 [Brassica napus] (122)
|
| /------------------------------------- (265)
| |
| | /------- GSBRNA2T00037385001 [Brassica napus] (8)
| | /--100--+
| | | \------- XP_013630219.1 [Brassica oleracea] (136)
| | /--100-+
| | | | /------- GSBRNA2T00126794001 [Brassica napus] (180)
| | | \--100--+
| |------100-----+ \------- XP_009108529.1 [Brassica rapa] (138)
| | |
| | | /------- RrC8510_p2 [Raphanus raphanistrum] (79)
| | \------100-----+
| | \------- Rsa1.0_01845.1_g00006.1 [Raphanus sativus] (89)
| |
+ /--86--+ /---------------------- Rsa1.0_00115.1_g00017.1 [Raphanus sativus] (17)
| | | |
| | | | /------- GSBRNA2T00054659001 [Brassica napus] (46)
| | | /--100-+ /--100--+
| | | | | | \------- XP_013623587.1 [Brassica oleracea] (120)
| | | | \--100-+
| | | | | /------- XP_009135181.1 [Brassica rapa] (70)
| | |---65--+ \--100--+
| /--90--+ | | \------- GSBRNA2T00131633001 [Brassica napus] (190)
| | | | |
| | | | \----------------------------- 676758872 [Sisymbrium irio] (52)
| | | |
| | | |------------------------------------- GSBRNA2T00021575001 [Brassica napus] (29)
| /---91--+ | |
| | | | \------------------------------------- Thhalv10024488m [Eutrema salsugineum] (140)
| | | |
| | | \-------------------------------------------- RrC3699_p2 [Raphanus raphanistrum] (170)
\--97--+ |
| \--------------------------------------------------- GSBRNA2T00106768001 [Brassica napus] (84)
|
\----------------------------------------------------------- XP_009137213.1 [Brassica rapa] (92)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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