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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM492
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 196:
/----- Cagra.0747s0001.1.p [Capsella grandiflora] (3)
/------100-----+
| \----- Carubv10024768m [Capsella rubella] (114)
|
| /----- Csa16g044510.1 [Camelina sativa] (94)
/-100+ /-67-+
| | | \----- Csa07g052850.1 [Camelina sativa] (130)
| | /-100+
| | | \---------- Csa09g087050.1 [Camelina sativa] (137)
| \-100+
/------100------+ \--------------- Bostr.19427s0043.1.p [Boechera stricta] (150)
| |
| | /---------- AT2G22760.1 [Arabidopsis thaliana] (50)
| | |
| \------100-----+ /----- 481137 [Arabidopsis lyrata] (116)
| \-100+
| \----- Araha.25108s0001.1.p [Arabidopsis halleri] (125)
|
| /----- XP_009140387.1 [Brassica rapa] (12)
| /---100---+
| | \----- GSBRNA2T00032912001 [Brassica napus] (41)
| |
| /---100---+ /----- XP_013634830.1 [Brassica oleracea] (15)
| | | /-100+
| | | | \----- GSBRNA2T00149793001 [Brassica napus] (99)
| | \-69-+
/-99-+ | | /----- RrC28165_p1 [Raphanus raphanistrum] (46)
| | | \-100+
| | | \----- Rsa1.0_00126.1_g00012.1 [Raphanus sativus] (83)
| | |
| | /-78-+ /----- RrC11742_p1 [Raphanus raphanistrum] (40)
| | | | /---100---+
| | | | | \----- Rsa1.0_24580.1_g00001.1 [Raphanus sativus] (59)
| | | | |
| | | | /-100+ /----- XP_009117332.1 [Brassica rapa] (87)
| | | | | | /-100+
| | | | | | | \----- GSBRNA2T00078166001 [Brassica napus] (98)
| | /-100-+ | | \-100+
/-99-+ | | | \-97-+ | /----- GSBRNA2T00007368001 [Brassica napus] (133)
| | | | | | \-100+
| | | | | | \----- XP_013603284.1 [Brassica oleracea] (146)
| | | | | |
| | \-100+ | \-------------------- 676720272 [Sisymbrium irio] (52)
| | | |
| | | \------------------------------ Tp4g01750 [Thellungiella parvula] (28)
/-70-+ | |
| | | \------------------------------------ Thhalv10000494m [Eutrema salsugineum] (90)
| | |
| | | /----- AA12G00203 [Aethionema arabicum] (66)
| | \-------------------100------------------+
/-93-+ | \----- AA46G00163 [Aethionema arabicum] (86)
| | |
| | \--------------------------------------------------- XP_010555452.1 [Tarenaya hassleriana] (23)
| |
| \-------------------------------------------------------- XP_010531586.1 [Tarenaya hassleriana] (141)
|
| /----- Gh_A12G0736 [Gossypium hirsutum] (9)
| /-100+
| | \----- Cotton_A_37582_BGI-A2_v1.0 [Gossypium arboreum] (43)
| /---100---+
| | \---------- Gorai.008G087600.1 [Gossypium raimondii] (128)
| |
| | /----- Cotton_A_10840_BGI-A2_v1.0 [Gossypium arboreum] (19)
| /-63-+ /-99-+
| | | | \----- Gh_A11G0459 [Gossypium hirsutum] (144)
| | | /-80-+
| | | | \---------- Gh_D11G0530 [Gossypium hirsutum] (117)
| | \-100+
--66-+ | \--------------- Gorai.007G057800.1 [Gossypium raimondii] (58)
| |
| /-53-+ /----- Gh_D11G2074 [Gossypium hirsutum] (13)
| | | /-95-+
| | | | \----- Gorai.007G229000.1 [Gossypium raimondii] (110)
| | | /-100+
| | | | | /----- Gh_A11G1894 [Gossypium hirsutum] (44)
| | | | \-97-+
| | \----75---+ \----- Cotton_A_35670_BGI-A2_v1.0 [Gossypium arboreum] (56)
| /-100-+ |
| | | \--------------- Thecc1EG000894t1 [Theobroma cacao] (110)
| | |
| | | /----- Gh_A02G1415 [Gossypium hirsutum] (24)
| | | /-98-+
| | | | \----- Cotton_A_29913_BGI-A2_v1.0 [Gossypium arboreum] (160)
| | \--------100--------+
| | | /----- Gorai.003G034600.1 [Gossypium raimondii] (25)
\-----------74-----------+ \-100+
| \----- Gh_D03G0304 [Gossypium hirsutum] (131)
|
| /----- Neem_36020_f_1 [Azadirachta indica] (17)
| /---100---+
| | \----- Neem_10696_f_1 [Azadirachta indica] (140)
| |
\---------95---------+ /---------- Neem_1256_f_1 [Azadirachta indica] (111)
| |
\-56-+ /----- Ciclev10027504m [Citrus clementina] (118)
\-100+
\----- orange1.1g026436m [Citrus sinensis] (135)
Subtree rooted at node 251:
/----- RrC4284_p1 [Raphanus raphanistrum] (4)
/---100---+
| \----- Rsa1.0_09258.1_g00001.1 [Raphanus sativus] (75)
|
/-100+ /----- GSBRNA2T00127418001 [Brassica napus] (35)
| | /-100+
| | | \----- XP_013603658.1 [Brassica oleracea] (36)
| \-100+
/-100+ | /----- GSBRNA2T00078169001 [Brassica napus] (38)
| | \-100+
| | \----- XP_009117336.1 [Brassica rapa] (89)
| |
| \-------------------- 676720270 [Sisymbrium irio] (79)
|
/-93-+ /----- GSBRNA2T00149788001 [Brassica napus] (7)
| | /-100+
| | | \----- XP_013635294.1 [Brassica oleracea] (85)
| | /-100+
| | | | /----- Rsa1.0_00126.1_g00014.1 [Raphanus sativus] (8)
| | | \-100+
/-100-+ \---100---+ \----- RrC8195_p1 [Raphanus raphanistrum] (91)
| | |
| | | /----- GSBRNA2T00032910001 [Brassica napus] (48)
| | \---100---+
| | \----- XP_009140386.1 [Brassica rapa] (77)
| |
| \------------------------------ Tp4g01740 [Thellungiella parvula] (57)
|
| /----- Csa07g052840.1 [Camelina sativa] (6)
| /-100+
/-99-+ | \----- Csa09g087040.1 [Camelina sativa] (170)
| | /-100+
| | | \---------- Csa16g044500.1 [Camelina sativa] (20)
| | /-100+
| | | | /----- Carubv10025041m [Capsella rubella] (60)
| | | \---100---+
| | /-100+ \----- Cagra.5392s0006.1.p [Capsella grandiflora] (95)
| | | |
/------100-----+ | | \-------------------- Bostr.19427s0042.1.p [Boechera stricta] (120)
| | \----100---+
| | | /---------- AT2G22750.2 [Arabidopsis thaliana] (81)
| | | |
| | \------95------+ /----- Araha.52102s0003.1.p [Arabidopsis halleri] (129)
| | \-100+
| | \----- 481136 [Arabidopsis lyrata] (145)
| |
| \----------------------------------------- Thhalv10000426m [Eutrema salsugineum] (29)
|
| /---------- GSBRNA2T00093566001 [Brassica napus] (11)
| |
| /--------100--------+ /----- XP_009109398.1 [Brassica rapa] (49)
| | \-76-+
| | \----- GSBRNA2T00025662001 [Brassica napus] (115)
| |
| | /--------------- Rsa1.0_00426.1_g00002.1 [Raphanus sativus] (14)
| | |
| | | /----- XP_013593134.1 [Brassica oleracea] (21)
| /--97-+ /-100+ /-100+
/-100+ | | | | | \----- GSBRNA2T00131181001 [Brassica napus] (62)
| | | | | \-100+
| | | | | | /----- XP_009132646.1 [Brassica rapa] (42)
| | | | /-95-+ \-100+
| | | | | | \----- GSBRNA2T00121613001 [Brassica napus] (47)
| | /-100+ | | |
| | | | \-51-+ \-------------------- 676765826 [Sisymbrium irio] (64)
| | | | |
| | | | \------------------------- Tp7g35490 [Thellungiella parvula] (55)
| | | |
| | | \------------------------------------ Thhalv10025715m [Eutrema salsugineum] (138)
| | /-58-+
--97-+ | | | /---------- Csa11g003660.1 [Camelina sativa] (70)
| | | | |
| | | | /-100+ /----- Cagra.6066s0006.1.p [Capsella grandiflora] (180)
| | | | | \-100+
| | /-100+ \------------97-----------+ \----- Carubv10006834m [Capsella rubella] (113)
| | | | |
| | | | \--------------- Bostr.25542s0234.1.p [Boechera stricta] (76)
| \-100+ |
| | \---------------------------------------------- AT4G37850.1 [Arabidopsis thaliana] (130)
| |
| \--------------------------------------------------- AA30G00292 [Aethionema arabicum] (51)
|
\------------------------------------------------------------- XP_010531324.1 [Tarenaya hassleriana] (72)
Subtree rooted at node 278:
/----- Neem_25444_f_1 [Azadirachta indica] (2)
/-100+
| \----- Neem_9783_f_4 [Azadirachta indica] (127)
/------------------------100-----------------------+
| | /----- orange1.1g021208m [Citrus sinensis] (27)
| \-100+
| \----- Ciclev10028925m [Citrus clementina] (73)
|
| /----- (196)
| /-----------55-----------+
| | \----- Neem_3598_f_2 [Azadirachta indica] (33)
| |
| | /----- Eucgr.H02386.1.p [Eucalyptus grandis] (37)
| | /-100+
| | | \----- EcC040884.10 [Eucalyptus camaldulensis] (119)
| | /-99-+
| | | | /----- Eucgr.H02387.1.p [Eucalyptus grandis] (190)
| | | \-100+
| | /-100+ \----- EcC036168.10 [Eucalyptus camaldulensis] (134)
| /-------94------+ | |
| | | | | /----- EcC052750.30 [Eucalyptus camaldulensis] (82)
| | | | \---100---+
| | | | \----- Eucgr.H02385.1.p [Eucalyptus grandis] (96)
| | | /-70-+
| | | | | /----- Eucgr.H02398.1.p [Eucalyptus grandis] (78)
| | | | | /-93-+
| | | | | | \----- EcC013799.10 [Eucalyptus camaldulensis] (84)
| | | | \---100---+
| | \-81-+ \---------- Eucgr.H02396.1.p [Eucalyptus grandis] (122)
| | |
| | | /--------------- Eucgr.H02391.1.p [Eucalyptus grandis] (61)
| | | |
| | | | /----- EcC029832.10 [Eucalyptus camaldulensis] (136)
| | \---100---+ /-100+
| | | | \----- Eucgr.H02390.1.p [Eucalyptus grandis] (142)
| | \-100+
| | \---------- Eucgr.H02389.1.p [Eucalyptus grandis] (140)
| |
| /-99-+ /----- (251)
--100+ | | /--------------100-------------+
| | | | \----- XP_010555430.1 [Tarenaya hassleriana] (18)
| | | |
| | | | /------------------------------ evm.model.supercontig_129.37 [Carica papaya] (16)
| | | | |
| | | /-91-+ | /----- Ciclev10027158m [Citrus clementina] (31)
| | | | | | /-100+
| | | | | | | \----- orange1.1g037441m [Citrus sinensis] (68)
| | | | | | /------100-----+
| | | | \--99-+ | \---------- Neem_3715_f_1 [Azadirachta indica] (124)
| | | | | |
| | | | | | /--------------- Gh_A11G1897 [Gossypium hirsutum] (32)
| | | | | | |
| | | | | | | /----- Gorai.007G228900.1 [Gossypium raimondii] (88)
| | | | \-93-+ /-100+ /-100+
| | | | | | | | \----- Gh_D11G2073 [Gossypium hirsutum] (100)
| | | | | | \-51-+
| | \-80-+ | | \---------- Cotton_A_35960_BGI-A2_v1.0 [Gossypium arboreum] (143)
| | | | |
| /-99-+ | | | /----- Cotton_A_29912_BGI-A2_v1.0 [Gossypium arboreum] (34)
| | | | \-100+ /-100+
| | | | | | \----- Gh_A02G1414 [Gossypium hirsutum] (97)
| | | | | /-100+
| | | | | | | /----- Gh_D03G0305 [Gossypium hirsutum] (71)
| | | | | | \-100+
| | | | \-100+ \----- Gorai.003G034700.1 [Gossypium raimondii] (132)
| | | | |
| | | | \--------------- Thecc1EG000895t1 [Theobroma cacao] (80)
| | | |
| | | \----------------------------------------- Eucgr.I00634.1.p [Eucalyptus grandis] (54)
| | |
| | | /------------------------------ XP_010548842.1 [Tarenaya hassleriana] (10)
| | | |
| | | | /----- 676750788 [Sisymbrium irio] (26)
| | | | /------76------+
\-97-+ | | | \----- Tp3g27680 [Thellungiella parvula] (39)
| | | |
| | | | /---------- XP_009136241.1 [Brassica rapa] (63)
| \---------100--------+ | |
| | /-100+ | /----- XP_013627871.1 [Brassica oleracea] (67)
| | | | /-100+-100+
| | | | | | \----- GSBRNA2T00149992001 [Brassica napus] (120)
| | | | | |
| | | \-100+ \---------- GSBRNA2T00155054001 [Brassica napus] (92)
| \-99-+ |
| | | /----- RrC1871_p5 [Raphanus raphanistrum] (112)
| | \---100---+
| | \----- Rsa1.0_16428.1_g00001.1 [Raphanus sativus] (121)
| |
| \------------------------- AA123G00123 [Aethionema arabicum] (69)
|
\-------------------------------------------------------- evm.model.supercontig_20.63 [Carica papaya] (123)
Root part of tree:
/------------------------------------------------------------------ Thecc1EG006357t1 [Theobroma cacao] (1)
|
| /------------- (278)
|-------------------------99-------------------------+
| \------------- Eucgr.I02518.1.p [Eucalyptus grandis] (74)
|
| /------------- Gh_A04G1091 [Gossypium hirsutum] (5)
| /-----100----+
| | \------------- Cotton_A_08820_BGI-A2_v1.0 [Gossypium arboreum] (53)
+ /-----100-----+
| | | /------------- Gh_D04G1698 [Gossypium hirsutum] (45)
| | \-----100----+
| /-----100----+ \------------- Gorai.012G161900.1 [Gossypium raimondii] (65)
| | |
| | \---------------------------------------- Gorai.012G161700.1 [Gossypium raimondii] (126)
| |
| | /------------- Cotton_A_16748_BGI-A2_v1.0 [Gossypium arboreum] (22)
\-----97-----+ /-----100----+
| | \------------- Gh_A01G1502 [Gossypium hirsutum] (93)
| /------82-----+
| | \-------------------------- Gh_D01G1748 [Gossypium hirsutum] (139)
\-----100----+
\---------------------------------------- Gorai.002G211500.1 [Gossypium raimondii] (30)
|
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