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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5004
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 97:
/----- XP_009102983.1 [Brassica rapa] (2)
/-100+
| \----- GSBRNA2T00089936001 [Brassica napus] (28)
/-100+
| | /----- XP_013598139.1 [Brassica oleracea] (4)
| \-100+
/-100-+ \----- GSBRNA2T00117407001 [Brassica napus] (29)
| |
/----------------100----------------+ \--------------- Rsa1.0_04683.1_g00002.1 [Raphanus sativus] (30)
| |
| \--------------------- Tp1g23590 [Thellungiella parvula] (33)
|
| /----- RrC7158_p2 [Raphanus raphanistrum] (3)
| /---100---+
| | \----- Rsa1.0_04683.1_g00003.1 [Raphanus sativus] (51)
| |
| /-100-+ /----- GSBRNA2T00117406001 [Brassica napus] (7)
| | | /-100+
| | | | \----- XP_013598135.1 [Brassica oleracea] (44)
| | \-100+
| /-100+ | /----- GSBRNA2T00089937001 [Brassica napus] (13)
| | | \-100+
| | | \----- XP_009102986.1 [Brassica rapa] (41)
| | |
| | \--------------------- Tp1g23580 [Thellungiella parvula] (47)
| |
| | /----- Rsa1.0_04786.1_g00005.1 [Raphanus sativus] (21)
| /-100+ /---100---+
| | | | \----- RrC5705_p1 [Raphanus raphanistrum] (32)
| | | |
| | | /-100-+ /----- XP_013586419.1 [Brassica oleracea] (27)
| | | | | /-100+
| | | | | | \----- GSBRNA2T00142280001 [Brassica napus] (34)
| | | | \-100+
| | \-100+ | /----- GSBRNA2T00038356001 [Brassica napus] (46)
| | | \-99-+
| | | \----- XP_009113770.1 [Brassica rapa] (53)
| | |
| | \--------------------- 676772178 [Sisymbrium irio] (26)
| |
| /-80-+ /----- Csa17g036060.1 [Camelina sativa] (14)
/-100+ | | /-87-+
| | | | | \----- Csa03g030570.1 [Camelina sativa] (25)
| | | | /-100+
| | | | | \---------- Csa14g034910.1 [Camelina sativa] (40)
| | | | /--99-+
| | | | | | /----- Cagra.8874s0007.1.p [Capsella grandiflora] (16)
| | | | | \---100---+
| | | | /-100+ \----- Carubv10009367m [Capsella rubella] (43)
| | /-100+ | | |
| | | | | | \--------------------- Bostr.15697s0062.1.p [Boechera stricta] (24)
| | | | | |
| | | | \-100+ /----- 890257 [Arabidopsis lyrata] (19)
| | | | | /-100+
| | | | | | \----- Araha.11372s0005.1.p [Arabidopsis halleri] (50)
| | /-100+ | \------100------+
| | | | | \---------- AT1G27360.1 [Arabidopsis thaliana] (22)
| | | | |
| | | | \------------------------------------ Thhalv10007882m [Eutrema salsugineum] (42)
| | | |
| | | | /----- XP_010556129.1 [Tarenaya hassleriana] (35)
| | | \----------------100----------------+
| | | \----- XP_010530548.1 [Tarenaya hassleriana] (39)
| | |
--100+ | | /----- Csa03g030580.1 [Camelina sativa] (5)
| | | /-82-+
| | /-100-+ | \----- Csa14g034920.1 [Camelina sativa] (17)
| | | | /-100+
| | | | | \---------- Csa17g036070.1 [Camelina sativa] (45)
| | | | /--97-+
| | | | | | /----- Carubv10009364m [Capsella rubella] (37)
| | | | | \---100---+
| | | | /-100+ \----- Cagra.8874s0008.1.p [Capsella grandiflora] (49)
| | | | | |
| \-99-+ | | \--------------------- Bostr.15697s0063.1.p [Boechera stricta] (15)
| | | |
| | \--------100--------+ /----- 472939 [Arabidopsis lyrata] (20)
| | | /-100+
| | | | \----- Araha.11372s0006.1.p [Arabidopsis halleri] (48)
| | \------100------+
| | \---------- AT1G27370.1 [Arabidopsis thaliana] (52)
| |
| \---------------------------------------------------- Thhalv10007828m [Eutrema salsugineum] (12)
|
| /----- XP_009109814.1 [Brassica rapa] (8)
| /-100+
| | \----- GSBRNA2T00066018001 [Brassica napus] (18)
\------------------------100------------------------+
| /----- XP_013623320.1 [Brassica oleracea] (10)
\-97-+
\----- GSBRNA2T00050076001 [Brassica napus] (23)
Root part of tree:
/------------------------------------------------------------------- GSBRNA2T00038358001 [Brassica napus] (1)
|
|------------------------------------------------------------------- XP_009113768.1 [Brassica rapa] (31)
|
| /----------------- (97)
+ /------100------+
| | \----------------- 676772180 [Sisymbrium irio] (36)
| /-------100------+
| | | /----------------- RrC5705_p2 [Raphanus raphanistrum] (9)
| | \------100------+
\-------100------+ \----------------- Rsa1.0_04786.1_g00004.1 [Raphanus sativus] (11)
|
| /----------------- XP_013586424.1 [Brassica oleracea] (6)
\---------------100--------------+
\----------------- GSBRNA2T00142279001 [Brassica napus] (38)
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