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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM501
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 179:
/----- Cagra.0027s0007.1.p [Capsella grandiflora] (2)
/-100+
| \----- Carubv10015292m [Capsella rubella] (112)
|
/-100+ /----- Csa15g076640.1 [Camelina sativa] (92)
| | |
| \-100+----- Csa01g041280.1 [Camelina sativa] (97)
| |
| \----- Csa19g057740.1 [Camelina sativa] (150)
|
/--------------100-------------+--------------- Bostr.18351s0282.1.p [Boechera stricta] (75)
| |
| |--------------- 480722 [Arabidopsis lyrata] (180)
| |
| |--------------- Araha.1865s0008.1.p [Arabidopsis halleri] (139)
| |
| \--------------- AT2G18160.1 [Arabidopsis thaliana] (151)
|
| /----- XP_013612816.1 [Brassica oleracea] (5)
| /-100+
| | \----- GSBRNA2T00010313001 [Brassica napus] (120)
| /-100+
| | | /----- GSBRNA2T00045003001 [Brassica napus] (96)
| | \-100+
| /-100+ \----- XP_009112471.1 [Brassica rapa] (146)
| | |
| | | /----- Rsa1.0_04689.1_g00002.1 [Raphanus sativus] (87)
| /-99-+ \---100---+
| | | \----- RrC11855_p1 [Raphanus raphanistrum] (132)
| | |
/-98-+ /-99-+ \-------------------- 676714220 [Sisymbrium irio] (18)
| | | |
| | | \------------------------- Tp3g31590 [Thellungiella parvula] (43)
| | |
| | | /---------- XP_013623036.1 [Brassica oleracea] (10)
| | /--63-+ |
| | | | | /----- XP_009150749.1 [Brassica rapa] (25)
| | | | /-87-+-100+
| | | | | | \----- GSBRNA2T00042140001 [Brassica napus] (113)
| | | | | |
| | | \------100-----+ \---------- GSBRNA2T00013267001 [Brassica napus] (57)
| | | |
| | | | /----- RrC10274_p1 [Raphanus raphanistrum] (46)
| | /-80-+ \---100---+
/-99-+ | | | \----- Rsa1.0_00571.1_g00021.1 [Raphanus sativus] (170)
| | | | |
| | | | | /---------- XP_009102266.1 [Brassica rapa] (45)
| | | | | |
| | | | | |---------- XP_013593333.1 [Brassica oleracea] (77)
| | | | | |
| | \-99-+ \-----------100-----------+ /----- RrC1639_p1 [Raphanus raphanistrum] (99)
| | | |-100+
/-100+ | | | \----- Rsa1.0_04188.1_g00002.1 [Raphanus sativus] (111)
| | | | |
| | | | \---------- GSBRNA2T00083708001 [Brassica napus] (150)
| | | |
| | | \----------------------------------------- Thhalv10022883m [Eutrema salsugineum] (64)
| | |
| | \--------------------------------------------------- KFK40204.1 [Arabis alpina] (40)
--100+ |
| \-------------------------------------------------------- AA33G00153 [Aethionema arabicum] (48)
|
| /----- XP_010526773.1 [Tarenaya hassleriana] (26)
| /-97-+
| | \----- XP_010531056.1 [Tarenaya hassleriana] (125)
\------------------------100-----------------------+
\---------- XP_010548308.1 [Tarenaya hassleriana] (49)
Subtree rooted at node 277:
/----- GSBRNA2T00047841001 [Brassica napus] (4)
/-100-+
| \----- GSBRNA2T00095647001 [Brassica napus] (61)
|
| /----- GSBRNA2T00126659001 [Brassica napus] (56)
/-100+-100-+
| | \----- XP_009108719.1 [Brassica rapa] (67)
| |
/-100-+ \----------- XP_013622408.1 [Brassica oleracea] (59)
| |
| | /----- Rsa1.0_01970.1_g00004.1 [Raphanus sativus] (140)
/-80-+ \----100---+
| | \----- RrC980_p1 [Raphanus raphanistrum] (143)
| |
| \---------------------- 676780904 [Sisymbrium irio] (85)
|
| /----- GSBRNA2T00121337001 [Brassica napus] (22)
/----92----+ /-100-+
| | | \----- XP_009111076.1 [Brassica rapa] (82)
| | /-78-+
| | | | /----- GSBRNA2T00130846001 [Brassica napus] (60)
| | | \-100-+
| \----100---+ \----- XP_013599663.1 [Brassica oleracea] (66)
| |
| | /----- RrC32930_p1 [Raphanus raphanistrum] (34)
| \----100---+
| \----- Rsa1.0_00048.1_g00033.1 [Raphanus sativus] (118)
|
| /----- Carubv10005978m [Capsella rubella] (14)
| /----100---+
| | \----- Cagra.2350s0008.1.p [Capsella grandiflora] (81)
| |
| | /----- 491198 [Arabidopsis lyrata] (29)
| | /-100-+
| /--74-+ | \----- Araha.10294s0018.1.p [Arabidopsis halleri] (35)
| | |-100+
| | | \----------- AT4G34590.1 [Arabidopsis thaliana] (153)
| /-70-+ |
| | | \---------------- Csa11g007320.1 [Camelina sativa] (144)
| | |
/--93-+ /--83-+ \---------------------- Csa10g007540.1 [Camelina sativa] (141)
| | | |
| |-80-+ \--------------------------- Csa12g008980.1 [Camelina sativa] (19)
| | |
| | \--------------------------------- Bostr.7867s1319.1.p [Boechera stricta] (154)
| |
| | /----- Rsa1.0_00678.1_g00008.1 [Raphanus sativus] (30)
| | /----100---+
| | | \----- RrC21700_p1 [Raphanus raphanistrum] (147)
| | |
| | /-100-+ /----- GSBRNA2T00081775001 [Brassica napus] (41)
| | | | /--98-+
/-100+ | | | | \----- XP_009138305.1 [Brassica rapa] (130)
| | | | \-100+
| | |-------70------+ | /----- XP_013593652.1 [Brassica oleracea] (44)
| | | | \--99-+
| | | | \----- GSBRNA2T00100019001 [Brassica napus] (121)
| | | |
| | | \---------------------- Thhalv10027296m [Eutrema salsugineum] (117)
| | |
/-100-+ | |-------------------------------------- KFK30089.1 [Arabis alpina] (115)
| | | |
| | | \-------------------------------------- Tp7g32380 [Thellungiella parvula] (149)
| | |
| | \-------------------------------------------- AA45G00023 [Aethionema arabicum] (73)
| |
| | /----------- XP_010526918.1 [Tarenaya hassleriana] (17)
| | |
/-93-+ \-----------------100-----------------+ /----- XP_010530816.1 [Tarenaya hassleriana] (20)
| | \-100-+
| | \----- XP_010548067.1 [Tarenaya hassleriana] (88)
| |
| | /----- Gh_D13G0320 [Gossypium hirsutum] (76)
| | /--88-+
| | | \----- Gorai.013G035200.1 [Gossypium raimondii] (110)
| \--------------------100--------------------+
| | /----- Cotton_A_19731_BGI-A2_v1.0 [Gossypium arboreum] (90)
| \--76-+
| \----- Gh_A13G2093 [Gossypium hirsutum] (94)
|
| /----------- EcC048782.10 [Eucalyptus camaldulensis] (7)
| |
| /-100+ /----- Eucgr.I01289.1.p [Eucalyptus grandis] (21)
| | \--57-+
---93-+ | \----- EcC033897.10 [Eucalyptus camaldulensis] (136)
| /--96-+
| | | /----- orange1.1g044691m [Citrus sinensis] (39)
| | \----100---+
| /-------98------+ \----- Ciclev10029834m [Citrus clementina] (89)
| | |
| | | /----- Neem_6485_f_1 [Azadirachta indica] (55)
| | \-------100------+
| | \----- Neem_26205_f_1 [Azadirachta indica] (148)
| |
| | /----- Gh_D04G1642 [Gossypium hirsutum] (11)
| | /-100-+
| | | \----- Gorai.012G155000.1 [Gossypium raimondii] (100)
| | /-100+
| | | \----------- Gh_A04G1063 [Gossypium hirsutum] (33)
| | /-100-+
\---------100---------+ | \---------------- Cotton_A_08893_BGI-A2_v1.0 [Gossypium arboreum] (127)
| |
| /-78-+ /----- Cotton_A_00722_BGI-A2_v1.0 [Gossypium arboreum] (37)
| | | /--75-+
| | | | \----- Gh_A03G1731 [Gossypium hirsutum] (72)
| | \----100---+
| /--99-+ | /----- Gh_D02G2164 [Gossypium hirsutum] (160)
| | | \--63-+
| | | \----- Gorai.005G245700.1 [Gossypium raimondii] (138)
| | |
| | \--------------------------- Thecc1EG006840t1 [Theobroma cacao] (47)
\-94-+
| /----- Eucgr.L01789.1.p [Eucalyptus grandis] (74)
| |
| /-100-+----- Eucgr.G01645.1.p [Eucalyptus grandis] (83)
| | |
\----------70---------+ \----- EcS552635.10 [Eucalyptus camaldulensis] (98)
|
\----------- evm.model.supercontig_538.1 [Carica papaya] (130)
Subtree rooted at node 224:
/----- Neem_39204_f_1 [Azadirachta indica] (3)
/-100+
| \----- Neem_1501_f_5 [Azadirachta indica] (63)
/--------------100-------------+
| | /----- orange1.1g041765m [Citrus sinensis] (32)
| \-100+
| \----- Ciclev10002731m [Citrus clementina] (124)
|
| /----- Gh_A01G0929 [Gossypium hirsutum] (12)
| /-82-+
| | \----- Cotton_A_32422_BGI-A2_v1.0 [Gossypium arboreum] (71)
| /-100+
| | | /----- Gorai.002G126500.1 [Gossypium raimondii] (129)
| | \-65-+
| | \----- Gh_D01G0974 [Gossypium hirsutum] (134)
| /-92-+
| | | /----- Gorai.010G008000.1 [Gossypium raimondii] (31)
| | | |
| | \---100---+----- Gh_D06G0032 [Gossypium hirsutum] (53)
/---------86--------+ | |
| | /-56-+ \----- Gh_A06G1847 [Gossypium hirsutum] (114)
| | | |
| | | | /---------- Gorai.005G109600.1 [Gossypium raimondii] (50)
| | | | |
| | | \---100---+ /----- Cotton_A_41094_BGI-A2_v1.0 [Gossypium arboreum] (54)
| | | \-98-+
| | /-93-+ \----- Gh_D02G0959 [Gossypium hirsutum] (119)
| | | |
| | | | /----- Cotton_A_07851_BGI-A2_v1.0 [Gossypium arboreum] (69)
| | | | /-97-+
| | | | | \----- Gh_A05G1641 [Gossypium hirsutum] (140)
| | /--93-+ | |
| | | | \------100-----+---------- Gorai.009G199300.1 [Gossypium raimondii] (78)
| | | | |
| | | | \---------- Gh_D05G1824 [Gossypium hirsutum] (110)
| \-91-+ |
| | \------------------------------ Thecc1EG034106t1 [Theobroma cacao] (80)
| |
| | /----- Eucgr.F01599.1.p [Eucalyptus grandis] (24)
| \--------------100-------------+
| \----- EcS775519.10 [Eucalyptus camaldulensis] (137)
|
| /----- GSBRNA2T00099379001 [Brassica napus] (8)
| /-100+
| | \----- XP_009104708.1 [Brassica rapa] (36)
| /-100+
| | | /----- XP_013589841.1 [Brassica oleracea] (15)
| | \-100+
| /---------100--------+ \----- GSBRNA2T00143703001 [Brassica napus] (38)
| | |
| | | /----- RrC11020_p1 [Raphanus raphanistrum] (27)
| | \---100---+
| | \----- Rsa1.0_01419.1_g00002.1 [Raphanus sativus] (68)
| |
| | /----- GSBRNA2T00067162001 [Brassica napus] (42)
| | /-84-+
--91-+ | | \----- XP_009128098.1 [Brassica rapa] (135)
| /-61-+ /-100+
| | | | | /----- XP_013618497.1 [Brassica oleracea] (79)
| | | | \-100+
| | | /-100+ \----- GSBRNA2T00004817001 [Brassica napus] (116)
| | | | |
| | | /-99-+ \--------------- Rsa1.0_03479.1_g00004.1 [Raphanus sativus] (86)
| | | | |
| | | /-97-+ \-------------------- 676737418 [Sisymbrium irio] (152)
| | | | |
| | \--84-+ \------------------------- Tp5g30530 [Thellungiella parvula] (91)
| | |
| | \------------------------------ Thhalv10019604m [Eutrema salsugineum] (131)
| |
| | /----- 895409 [Arabidopsis lyrata] (28)
| | /-100+
| | | \----- Araha.47425s0002.1.p [Arabidopsis halleri] (123)
| /-73-+ /---100---+
| | | | \---------- AT1G75390.1 [Arabidopsis thaliana] (51)
| | | |
| | | | /----- Csa16g039290.1 [Camelina sativa] (93)
| | | | |
| | | | /-100+----- Csa07g046870.1 [Camelina sativa] (120)
| | |---------99---------+ | |
| | | | | \----- Csa09g080000.1 [Camelina sativa] (128)
| | | | /-100+
| /-88-+ | | | | /----- Carubv10021012m [Capsella rubella] (190)
| | | | | | \-100+
| | | | \-100+ \----- Cagra.0799s0011.1.p [Capsella grandiflora] (126)
| | | | |
| | | | \--------------- Bostr.3288s0189.1.p [Boechera stricta] (145)
| | | |
| /-100+ | \----------------------------------------- AA31G00416 [Aethionema arabicum] (84)
| | | |
| | | \---------------------------------------------- KFK41975.1 [Arabis alpina] (70)
| | |
\-82-+ | /----- XP_010533482.1 [Tarenaya hassleriana] (52)
| \----------------------97---------------------+
| \----- XP_010539884.1 [Tarenaya hassleriana] (58)
|
\-------------------------------------------------------- Eucgr.F01867.1.p [Eucalyptus grandis] (133)
Root part of tree:
/------------------------------------------------------------------ Cotton_A_28388_BGI-A2_v1.0 [Gossypium arboreum] (1)
|
|------------------------------------------------------------------ Gh_A12G0574 [Gossypium hirsutum] (16)
|
| /--------- (179)
| /--------59--------+
| | \--------- evm.model.supercontig_6.175 [Carica papaya] (122)
| |
| /----94---+ /--------- (224)
| | | /----95---+
| | | | \--------- (277)
+ /---85---+ \---83---+
| | | \------------------- Eucgr.I02396.1.p [Eucalyptus grandis] (65)
| | |
| | \-------------------------------------- Thecc1EG000304t1 [Theobroma cacao] (142)
| /---100---+
| | | /--------- Gorai.007G200600.1 [Gossypium raimondii] (6)
| | | /----97---+
| | | | \--------- Gh_D11G1832 [Gossypium hirsutum] (62)
| | \------------100------------+
| | | /--------- Cotton_A_14671_BGI-A2_v1.0 [Gossypium arboreum] (13)
\---100--+ \---100---+
| \--------- Gh_A11G1675 [Gossypium hirsutum] (23)
|
|--------------------------------------------------------- Gorai.008G065300.1 [Gossypium raimondii] (9)
|
\--------------------------------------------------------- Gh_D12G0589 [Gossypium hirsutum] (95)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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