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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5100
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 83:
/----- GSBRNA2T00061222001 [Brassica napus] (2)
/-100+
| \----- XP_013634644.1 [Brassica oleracea] (44)
/-100+
| | /----- GSBRNA2T00089134001 [Brassica napus] (7)
| \-99-+
/-100-+ \----- XP_009143995.1 [Brassica rapa] (42)
| |
| | /----- RrC3706_p2 [Raphanus raphanistrum] (15)
/-100+ \---100---+
| | \----- Rsa1.0_15530.1_g00001.1 [Raphanus sativus] (26)
| |
| \--------------------- 676788532 [Sisymbrium irio] (12)
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/-99-+ /----- Rsa1.0_34613.1_g00001.1 [Raphanus sativus] (14)
| | /---100---+
| | | \----- RrC2932_p2 [Raphanus raphanistrum] (45)
| | |
| \----100---+ /----- GSBRNA2T00076567001 [Brassica napus] (29)
| | /-100+
| | | \----- XP_009132851.1 [Brassica rapa] (30)
| \-100+
| | /----- GSBRNA2T00055597001 [Brassica napus] (31)
| \-100+
/-100+ \----- XP_013626947.1 [Brassica oleracea] (32)
| |
| | /----- XP_013634909.1 [Brassica oleracea] (3)
| | /-100+
| | | \----- GSBRNA2T00006425001 [Brassica napus] (40)
| | /-100+
| | | \---------- GSBRNA2T00085597001 [Brassica napus] (22)
/-99-+ | /-100-+
| | | | | /----- RrC14648_p1 [Raphanus raphanistrum] (8)
| | | | \---100---+
| | \---100---+ \----- Rsa1.0_01027.1_g00010.1 [Raphanus sativus] (36)
| | |
| | \--------------------- Tp4g14830 [Thellungiella parvula] (4)
| |
| \------------------------------------ Thhalv10016567m [Eutrema salsugineum] (23)
|
| /----- Csa05g024410.1 [Camelina sativa] (5)
| /-100+
/-99-+ | \----- Csa07g010180.1 [Camelina sativa] (21)
| | /-90-+
| | | | /----- Carubv10025227m [Capsella rubella] (11)
| | | \-100+
| | /-100-+ \----- Cagra.0352s0034.1.p [Capsella grandiflora] (39)
| | | |
| | | \--------------- Bostr.23794s0867.1.p [Boechera stricta] (18)
| | |
/--95-+ | /-100+ /----- Araha.1971s0002.1.p [Arabidopsis halleri] (25)
| | | | | /-100+
| | | | | | \----- 482173 [Arabidopsis lyrata] (46)
| | \------100-----+ \----100---+
| | | \---------- AT2G32460.1 [Arabidopsis thaliana] (33)
| | |
/-99-+ | \-------------------------- KFK31122.1 [Arabis alpina] (6)
| | |
| | \---------------------------------------------- AA32G00526 [Aethionema arabicum] (10)
| |
| | /----- XP_010543010.1 [Tarenaya hassleriana] (9)
| \----------------------100---------------------+
| \----- XP_010522345.1 [Tarenaya hassleriana] (47)
|
/-99-+ /----- orange1.1g039708m [Citrus sinensis] (13)
| | /-100+
| | | \----- Ciclev10014958m [Citrus clementina] (35)
| | /-100+
| | | \---------- Neem_537_f_8 [Azadirachta indica] (24)
--100+ | /--99-+
| | | \--------------- Thecc1EG011907t1 [Theobroma cacao] (38)
| \----------------100----------------+
| \--------------------- evm.model.supercontig_87.85 [Carica papaya] (37)
|
\-------------------------------------------------------------- Eucgr.A01122.1.p [Eucalyptus grandis] (43)
Root part of tree:
/------------------------------------------------------------------- Ciclev10010620m [Citrus clementina] (1)
|
|------------------------------------------------------------------- orange1.1g046419m [Citrus sinensis] (34)
|
+ /------------------------------------------------------ (83)
| |
| | /------------- Gorai.007G312700.1 [Gossypium raimondii] (16)
| | /-----100-----+
\-----100----+ | \------------- Gh_D11G2870 [Gossypium hirsutum] (41)
| /-----99-----+
| | \--------------------------- Gh_A11G2522 [Gossypium hirsutum] (17)
| |
\-----100-----+ /------------- Cotton_A_14816_BGI-A2_v1.0 [Gossypium arboreum] (19)
| /-----100-----+
| | \------------- Gh_A11G2520 [Gossypium hirsutum] (28)
\-----100----+
| /------------- Gh_D11G2866 [Gossypium hirsutum] (20)
\-----100-----+
\------------- Gorai.007G312400.1 [Gossypium raimondii] (27)
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