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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM530
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 170:
/---------- Csa07g052720.1 [Camelina sativa] (2)
|
|---------- Csa09g086950.1 [Camelina sativa] (17)
/-100+
| | /----- Cagra.1080s0003.1.p [Capsella grandiflora] (60)
| \-100+
| \----- Carubv10023996m [Capsella rubella] (96)
/------100-----+
| | /----- AT2G22630.1 [Arabidopsis thaliana] (9)
| | /-100+
| | | \----- 320100 [Arabidopsis lyrata] (30)
| \-85-+
| \---------- Bostr.19427s0033.1.p [Boechera stricta] (88)
|
| /----- XP_013603502.1 [Brassica oleracea] (10)
| /-66-+
| | \----- XP_009117344.1 [Brassica rapa] (37)
| /-100+
/--51-+ | \---------- RrC17408_p1 [Raphanus raphanistrum] (12)
| | /-87-+
| | | \--------------- 676720286 [Sisymbrium irio] (55)
| | /-58-+
| | | \-------------------- Thhalv10000598m [Eutrema salsugineum] (50)
| | |
| | | /---------- XP_009140371.1 [Brassica rapa] (16)
| | | |
| | | | /----- GSBRNA2T00149769001 [Brassica napus] (26)
/-100+ | | |-100+
| | \-55-+------100-----+ \----- XP_013634719.1 [Brassica oleracea] (36)
| | | |
| | | |---------- GSBRNA2T00032893001 [Brassica napus] (38)
| | | |
| | | \---------- Rsa1.0_00614.1_g00008.1 [Raphanus sativus] (94)
| | |
| | \------------------------- Tp4g01670 [Thellungiella parvula] (77)
| |
| \------------------------------------ KFK34858.1 [Arabis alpina] (81)
|
| /----- Csa12g003420.1 [Camelina sativa] (5)
| /-97-+
| | \----- Csa10g003160.1 [Camelina sativa] (47)
| /-73-+
| | \---------- Bostr.25542s0226.1.p [Boechera stricta] (58)
| |
| /-63-+ /----- Araha.1654s0001.1.p [Arabidopsis halleri] (28)
| | | /-100+
| | | | \----- 490820 [Arabidopsis lyrata] (49)
| | \-95-+
| /----99---+ \---------- AT4G37940.1 [Arabidopsis thaliana] (66)
/-95-+ | |
| | | | /----- Cagra.5414s0059.1.p [Capsella grandiflora] (46)
| | | \------100-----+
| | | \----- Carubv10006453m [Capsella rubella] (78)
| | |
| | | /----- GSBRNA2T00121622001 [Brassica napus] (8)
| | | /-100+
| | | | \----- XP_009131941.1 [Brassica rapa] (83)
| | | /-100+
| | | | | /----- GSBRNA2T00131190001 [Brassica napus] (21)
| | /--97-+ | \-100+
| | | | /-100+ \----- XP_013589012.1 [Brassica oleracea] (52)
| | | | | |
| | | | /-96-+ \--------------- RrC226_p3 [Raphanus raphanistrum] (31)
| | | | | |
| | | | | \-------------------- 676765800 [Sisymbrium irio] (57)
| | | | |
/-100+ | | | | /--------------- Tp7g35590 [Thellungiella parvula] (15)
| | | | | | |
| | | | | | | /----- XP_013627313.1 [Brassica oleracea] (25)
| | | | | | | |
| | \-100+ \-57-+ | /-100+----- GSBRNA2T00150996001 [Brassica napus] (51)
| | | |----57---+ | |
| | | | |-98-+ \----- XP_009109406.1 [Brassica rapa] (100)
| | | | | |
| | | | | \---------- Rsa1.0_05755.1_g00001.1 [Raphanus sativus] (72)
| | | | |
/-91-+ | | | \--------------- KFK30425.1 [Arabis alpina] (98)
| | | | |
| | | | \------------------------- Thhalv10026139m [Eutrema salsugineum] (59)
| | | |
| | | \------------------------------------ AA30G00303 [Aethionema arabicum] (34)
| | |
| | | /----- XP_010555422.1 [Tarenaya hassleriana] (89)
| | \-------------------100------------------+
| | \----- XP_010531345.1 [Tarenaya hassleriana] (140)
| |
/-86-+ \--------------------------------------------------- XP_010518970.1 [Tarenaya hassleriana] (70)
| |
| | /----- Gh_D11G0534 [Gossypium hirsutum] (20)
| | /----81---+
| | | \----- Gh_A11G0462 [Gossypium hirsutum] (85)
| | |
| | /-100+ /----- Cotton_A_10847_BGI-A2_v1.0 [Gossypium arboreum] (79)
| | | | /-91-+
| | | | | \----- Cotton_A_10849_BGI-A2_v1.0 [Gossypium arboreum] (130)
| \----------------100----------------+ \-58-+
| | \---------- Gorai.007G058200.1 [Gossypium raimondii] (95)
| |
| \-------------------- Thecc1EG000931t1 [Theobroma cacao] (40)
|
| /-------------------- AT2G14210.1 [Arabidopsis thaliana] (3)
| |
| | /----- Cagra.3821s0004.1.p [Capsella grandiflora] (32)
| | /-100+
| /-100+ | \----- Carubv10015972m [Capsella rubella] (45)
| | | /-92-+
| | | | \---------- Bostr.13083s0004.1.p [Boechera stricta] (120)
| | \-100+
| | \--------------- Csa01g035280.1 [Camelina sativa] (65)
| |
| | /----- GSBRNA2T00144676001 [Brassica napus] (11)
| /-97-+ /-100+
| | | | \----- XP_013594265.1 [Brassica oleracea] (91)
--75-+ | | /-100+
| | | | | /----- XP_009123192.1 [Brassica rapa] (33)
| | | | \-82-+
| | | /-91-+ \----- GSBRNA2T00089502001 [Brassica napus] (80)
| /-100-+ | | |
| | | \-91-+ \--------------- Tp3g27580 [Thellungiella parvula] (99)
| | | |
| | | \-------------------- 676750776 [Sisymbrium irio] (23)
| /-100+ |
| | | \------------------------------ AA123G00130 [Aethionema arabicum] (13)
| | |
| | \------------------------------------ XP_010527021.1 [Tarenaya hassleriana] (68)
| |
| | /----- Gh_A03G1563 [Gossypium hirsutum] (7)
| |----------------100----------------+
| | \----- Gh_D02G2012 [Gossypium hirsutum] (43)
| |
| /-99-+ /----- Gorai.008G018100.1 [Gossypium raimondii] (18)
| | | /-74-+
| | | | \----- Gh_D12G0163 [Gossypium hirsutum] (48)
| | | /-100+
| | | | \---------- Gh_A12G0150 [Gossypium hirsutum] (22)
| | |------------99-----------+
| | | \--------------- Thecc1EG007324t1 [Theobroma cacao] (71)
| | |
| | | /----- EcC054745.10 [Eucalyptus camaldulensis] (76)
\------100-----+ \-----------------96----------------+
| \----- XP_010520705.1 [Tarenaya hassleriana] (93)
|
| /----- Gh_D13G0472 [Gossypium hirsutum] (42)
| /-100+
| | \----- Gorai.013G053800.1 [Gossypium raimondii] (82)
| /-100+
| | \---------- Gh_A13G0423 [Gossypium hirsutum] (44)
\--------------100-------------+
| /----- Gh_A13G0425 [Gossypium hirsutum] (61)
\---100---+
\----- Gorai.013G054000.1 [Gossypium raimondii] (62)
Root part of tree:
/------------------------------------------------------------------ Rsa1.0_01468.1_g00007.1 [Raphanus sativus] (1)
|
|------------------------------------------------------------------ RrC2563_p1 [Raphanus raphanistrum] (4)
|
| /----- (170)
| /------95------+
| | \----- Eucgr.I02593.1.p [Eucalyptus grandis] (64)
| |
| | /----- Gh_A06G0244 [Gossypium hirsutum] (19)
| /-99-+ /-100+
| | | | \----- Gh_D06G0245 [Gossypium hirsutum] (63)
| | | /-77-+
| | | | \---------- Thecc1EG034549t1 [Theobroma cacao] (150)
| /-100+ \-98-+
| | | \--------------- Gh_Sca004768G07 [Gossypium hirsutum] (110)
| | |
| /-100-+ \------------------------- XP_010520846.1 [Tarenaya hassleriana] (67)
| | |
| /-100+ \------------------------------ XP_010520827.1 [Tarenaya hassleriana] (69)
| | |
| | \------------------------------------ AA817G00001 [Aethionema arabicum] (54)
| |
| | /----- Carubv10017951m [Capsella rubella] (24)
| | /-99-+
+ /-63-+ | \----- Cagra.0578s0054.1.p [Capsella grandiflora] (27)
| | | /-64-+
| | | | \---------- Csa06g032970.1 [Camelina sativa] (29)
| | | /-93-+
| | | | \--------------- Bostr.20505s0022.1.p [Boechera stricta] (87)
| | | |
| /-100+ \---------100--------+ /----- Araha.3772s0002.1.p [Arabidopsis halleri] (41)
| | | | /-97-+
| | | | | \----- 486166 [Arabidopsis lyrata] (53)
| | | \---100---+
| /-55-+ | \---------- AT3G57230.1 [Arabidopsis thaliana] (75)
| | | |
| | | \---------------------------------------------- Thhalv10026116m [Eutrema salsugineum] (56)
| | |
| | \--------------------------------------------------- Tp7g32000 [Thellungiella parvula] (73)
| /-100+
| | | /-------------------- 676780986 [Sisymbrium irio] (6)
| | | |
| | | | /--------------- Rsa1.0_00344.1_g00022.1 [Raphanus sativus] (14)
| | \-----------------99----------------+ |
| | | | /----- GSBRNA2T00121299001 [Brassica napus] (74)
| | \-100+ /-95-+
| | | | \----- XP_009115272.1 [Brassica rapa] (84)
\-100+ \-100+
| | /----- XP_013620707.1 [Brassica oleracea] (86)
| \-100+
| \----- GSBRNA2T00130794001 [Brassica napus] (97)
|
| /----- XP_013595734.1 [Brassica oleracea] (35)
| /-100+
| | \----- GSBRNA2T00099980001 [Brassica napus] (39)
\------------------------100-----------------------+
| /----- XP_009138271.1 [Brassica rapa] (90)
\-100+
\----- GSBRNA2T00092702001 [Brassica napus] (92)
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