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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM531
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 211:
/----- GSBRNA2T00124924001 [Brassica napus] (2)
/-100+
| \----- XP_009117667.1 [Brassica rapa] (127)
/-----------100-----------+
| \---------- GSBRNA2T00047965001 [Brassica napus] (30)
|
| /-------------------- AT2G37430.1 [Arabidopsis thaliana] (37)
| |
| | /----- Csa04g051000.1 [Camelina sativa] (59)
| | /-56-+
| /-76-+ | \----- Csa06g040140.1 [Camelina sativa] (148)
| | | /-100+
| | | | \---------- Csa05g016430.1 [Camelina sativa] (120)
| | \-100+
| | | /----- Carubv10024141m [Capsella rubella] (110)
/-53-+ | \---100---+
| | /-100+ \----- Cagra.0666s0001.1.p [Capsella grandiflora] (147)
| | | |
| | | | /----- 482736 [Arabidopsis lyrata] (73)
| | | |--------100--------+
| |--53-+ | \----- Araha.5292s0002.1.p [Arabidopsis halleri] (129)
| | | |
| | | \------------------------- Bostr.23794s0343.1.p [Boechera stricta] (87)
| | |
/-53-+ | \------------------------------ Thhalv10017303m [Eutrema salsugineum] (50)
| | |
| | \------------------------------------ Tp4g19770 [Thellungiella parvula] (56)
| |
| | /----- RrC19803_p1 [Raphanus raphanistrum] (46)
| | /---100---+
| | | \----- Rsa1.0_06582.1_g00001.1 [Raphanus sativus] (110)
| | |
| \-----------100-----------+ /----- XP_009141657.1 [Brassica rapa] (57)
| | /-99-+
| | | \----- GSBRNA2T00005444001 [Brassica napus] (160)
| \-100+
/-100+ | /----- GSBRNA2T00155366001 [Brassica napus] (91)
| | \-100+
| | \----- XP_013635243.1 [Brassica oleracea] (131)
| |
| | /----- Rsa1.0_09394.1_g00001.1 [Raphanus sativus] (28)
| | /------100-----+
| | | \----- RrC13074_p3 [Raphanus raphanistrum] (139)
| | |
| | /-100+ /--------------- XP_013635180.1 [Brassica oleracea] (29)
/-90-+ | | | |
| | | | \-100+ /---------- GSBRNA2T00152654001 [Brassica napus] (74)
| | | | | |
| | \---------53---------+ \-86-+ /----- GSBRNA2T00116968001 [Brassica napus] (96)
| | | \-100+
| | | \----- XP_009143499.1 [Brassica rapa] (146)
| | |
| | \------------------------- 676781310 [Sisymbrium irio] (144)
| |
| \--------------------------------------------------- AA60G00030 [Aethionema arabicum] (111)
|
| /----- Csa09g062020.1 [Camelina sativa] (10)
| /-91-+
| | \----- Csa06g028060.1 [Camelina sativa] (49)
| /---100---+
| | \---------- Csa04g039640.1 [Camelina sativa] (84)
| |
| | /----- Araha.0602s0006.1.p [Arabidopsis halleri] (15)
| | /-100+
| /-100+ | \----- 485744 [Arabidopsis lyrata] (35)
| | | /-100+
| | | | \---------- AT3G53600.1 [Arabidopsis thaliana] (140)
/-68-+ | | |
| | | | | /----- Cagra.0612s0086.1.p [Capsella grandiflora] (26)
| | /-52-+ \-100+---100---+
| | | | | \----- Carubv10018114m [Capsella rubella] (34)
| | | | |
| | | | \--------------- Bostr.11793s0034.1.p [Boechera stricta] (100)
| | | |
| | | \------------------------- Thhalv10010956m [Eutrema salsugineum] (98)
| | |
| | | /-------------------- Tp5g08750 [Thellungiella parvula] (24)
| | | |
| | /-100-+ | /----- GSBRNA2T00007690001 [Brassica napus] (60)
| | | | | /-100+
| | | | /-87-+ | \----- XP_009103876.1 [Brassica rapa] (76)
| | | | | | /-100+
| | | | | | | | /----- XP_013588473.1 [Brassica oleracea] (120)
| | | | | | | \-100+
--100+ | | | | \-75-+ \----- GSBRNA2T00124660001 [Brassica napus] (115)
| | | | | |
| | | | | \--------------- 676722200 [Sisymbrium irio] (64)
| | | \-95-+
| \--------100--------+ | /---------- GSBRNA2T00046333001 [Brassica napus] (27)
| | | |
| | | /-84-+ /----- XP_009139386.1 [Brassica rapa] (81)
| | | | \-100+
| | | | \----- GSBRNA2T00126504001 [Brassica napus] (180)
| | \---100---+
| | | /----- Rsa1.0_02693.1_g00004.1 [Raphanus sativus] (52)
| | \---100---+
| | \----- RrC10319_p2 [Raphanus raphanistrum] (93)
| |
| \------------------------------------ AA62G00060 [Aethionema arabicum] (140)
|
| /----- XP_010553303.1 [Tarenaya hassleriana] (94)
\---------------------------97--------------------------+
\----- XP_010529859.1 [Tarenaya hassleriana] (136)
Subtree rooted at node 276:
/----- (211)
/------98------+
| \----- evm.model.supercontig_163.32 [Carica papaya] (132)
|
| /---------- Eucgr.A01232.1.p [Eucalyptus grandis] (51)
/----66---+ |
| | /-100+ /----- Eucgr.A01230.1.p [Eucalyptus grandis] (72)
| | | \-63-+
| \-100+ \----- Eucgr.A01231.1.p [Eucalyptus grandis] (190)
| |
| \--------------- Eucgr.A01233.1.p [Eucalyptus grandis] (119)
|
| /----- Gh_A09G1485 [Gossypium hirsutum] (4)
| /---100---+
| | \----- Cotton_A_02437_BGI-A2_v1.0 [Gossypium arboreum] (125)
| |
| | /----- Gorai.006G176100.1 [Gossypium raimondii] (21)
/----100---+ | /-100+
| | | | \----- Gh_D09G1496 [Gossypium hirsutum] (42)
| | |-100+
| | /-100+ | /----- Gh_A09G1486 [Gossypium hirsutum] (170)
| | | | \-100+
| | | | \----- Cotton_A_02439_BGI-A2_v1.0 [Gossypium arboreum] (116)
| | | |
| | /-100+ |--------------- Gh_D09G1495 [Gossypium hirsutum] (61)
| | | | |
| | | | \--------------- Gorai.006G176000.1 [Gossypium raimondii] (69)
| | | |
| \-60-+ \-------------------- Thecc1EG022001t1 [Theobroma cacao] (12)
| |
| | /---------- Neem_9298_f_3 [Azadirachta indica] (19)
| | |
| \------100-----+ /----- Ciclev10013311m [Citrus clementina] (67)
| \-100+
| \----- orange1.1g031966m [Citrus sinensis] (118)
|
| /----- orange1.1g041414m [Citrus sinensis] (3)
| /-100+
| | \----- Ciclev10032922m [Citrus clementina] (80)
| /-96-+
/-94-+ | | /----- Ciclev10032889m [Citrus clementina] (137)
| | | \-100+
| | /-100+ \----- orange1.1g044181m [Citrus sinensis] (145)
| | | |
| | | | /----- Ciclev10032899m [Citrus clementina] (23)
| | /-100+ \---100---+
| | | | \----- orange1.1g040287m [Citrus sinensis] (142)
| | | |
| | /----53----+ \-------------------- Neem_11100_f_1 [Azadirachta indica] (13)
| | | |
| | | \------------------------- Eucgr.G02910.1.p [Eucalyptus grandis] (150)
| | |
| | | /----- Gh_D10G2215 [Gossypium hirsutum] (5)
| | | /-100+
| | | | \----- Gorai.011G254300.1 [Gossypium raimondii] (134)
| | | /-100+
| | | | \---------- Gh_A10G1921 [Gossypium hirsutum] (83)
| | | |
| | | /-100+ /----- Gh_A10G2356 [Gossypium hirsutum] (7)
| | | | | /-95-+
| | | | | | \----- Cotton_A_28135_BGI-A2_v1.0 [Gossypium arboreum] (48)
| | | | \-100+
| | | | | /----- Gorai.011G254200.1 [Gossypium raimondii] (86)
| \-100+ | \-100+
| | /-100+ \----- Gh_D10G2214 [Gossypium hirsutum] (88)
| | | |
| | | | /----- Gorai.010G202400.1 [Gossypium raimondii] (36)
| | | | /-100+
/-66-+ | | | | \----- Gh_D06G2374 [Gossypium hirsutum] (130)
| | | | \---100---+
| | | | | /----- Gh_Sca005232G01 [Gossypium hirsutum] (45)
| | | /-100+ \-100+
| | | | | \----- Cotton_A_22951_BGI-A2_v1.0 [Gossypium arboreum] (63)
| | | | |
| | | | | /----- Cotton_A_00928_BGI-A2_v1.0 [Gossypium arboreum] (25)
| | | | | /-87-+
| | | | | | \----- Gh_A13G0196 [Gossypium hirsutum] (54)
| | \-100-+ \------100-----+
| | | | /----- Gorai.013G023300.1 [Gossypium raimondii] (40)
| | | \-96-+
| | | \----- Gh_D13G0210 [Gossypium hirsutum] (141)
| | |
| | \------------------------------ evm.TU.contig_30912.1 [Carica papaya] (11)
| |
| | /----- EcS597193.10 [Eucalyptus camaldulensis] (9)
| | /--------100--------+
| | | \----- Eucgr.B02398.1.p [Eucalyptus grandis] (33)
| | |
| | | /----- Eucgr.B02397.1.p [Eucalyptus grandis] (16)
| | | /-67-+
| | | | \----- Eucgr.B02394.1.p [Eucalyptus grandis] (90)
| | | /-97-+
| | | | | /----- Eucgr.L02150.1.p [Eucalyptus grandis] (31)
| | | | \-100+
| | | | \----- Eucgr.B02396.1.p [Eucalyptus grandis] (124)
| | | |
/-100+ \---------100--------+ /-76-+ /----- Eucgr.B02392.1.p [Eucalyptus grandis] (38)
| | | | | /-100+
| | | | | | \----- Eucgr.B02391.1.p [Eucalyptus grandis] (65)
| | | | | |
| | |-97-+ \-100+---------- EcC054168.10 [Eucalyptus camaldulensis] (85)
| | | | |
| | | | \---------- Eucgr.B02390.1.p [Eucalyptus grandis] (128)
| | | |
| | | \-------------------- Eucgr.B02393.1.p [Eucalyptus grandis] (126)
| | |
| | \------------------------- Eucgr.B02399.1.p [Eucalyptus grandis] (95)
| |
| | /--------------- Thecc1EG041899t1 [Theobroma cacao] (20)
| | |
| | | /----- Cotton_A_02243_BGI-A2_v1.0 [Gossypium arboreum] (66)
| | /-95-+ /-94-+
| | | | | \----- Gh_A03G0330 [Gossypium hirsutum] (75)
| | | \-100+
| | | | /----- Gorai.003G136200.1 [Gossypium raimondii] (70)
| | | \-79-+
/-100+ | /-100+ \----- Gh_D03G1247 [Gossypium hirsutum] (92)
| | | | |
| | | | | /---------- Gh_D13G2392 [Gossypium hirsutum] (58)
| | | | | |
| | | | | |---------- Gorai.013G265200.1 [Gossypium raimondii] (82)
| | | | \---100---+
| | | | | /----- Cotton_A_10539_BGI-A2_v1.0 [Gossypium arboreum] (89)
| | \------------74-----------+ \-97-+
| | | \----- Gh_A13G1993 [Gossypium hirsutum] (130)
| | |
| | | /----- orange1.1g031430m [Citrus sinensis] (22)
| | | /---100---+
--74-+ | | | \----- Ciclev10029464m [Citrus clementina] (71)
| | | |
| | \---100---+ /----- Neem_16576_f_1 [Azadirachta indica] (39)
| | | /-100+
| | | | \----- Neem_13423_f_1 [Azadirachta indica] (149)
| | \-97-+
| | \---------- Neem_11563_f_1 [Azadirachta indica] (133)
| |
| \-------------------------------------------------------- evm.model.supercontig_190.30 [Carica papaya] (122)
|
| /----- XP_010521816.1 [Tarenaya hassleriana] (18)
\--------------------------100--------------------------+
\----- XP_010542618.1 [Tarenaya hassleriana] (112)
Root part of tree:
/------------------------------------------------------------------ Csa05g035680.1 [Camelina sativa] (1)
|
|------------------------------------------------------------------ Csa16g016320.1 [Camelina sativa] (14)
|
|------------------------------------------------------------------ Cagra.8274s0001.1.p [Capsella grandiflora] (44)
|
|------------------------------------------------------------------ Csa07g015780.1 [Camelina sativa] (77)
|
|------------------------------------------------------------------ Csa24071s010.1 [Camelina sativa] (99)
|
|------------------------------------------------------------------ Carubv10024179m [Capsella rubella] (117)
|
| /--------------------------------------------------------- Thhalv10017375m [Eutrema salsugineum] (8)
| |
| | /---------------------------- Rsa1.0_02753.1_g00003.1 [Raphanus sativus] (17)
| | |
| | | /------------------- XP_013635190.1 [Brassica oleracea] (43)
| | /----63---+ |
| | | | | /--------- GSBRNA2T00118779001 [Brassica napus] (114)
| | | \---100--+---100---+
| | | | \--------- XP_009103709.1 [Brassica rapa] (135)
| | | |
| | | \------------------- GSBRNA2T00090045001 [Brassica napus] (123)
| | |
| | /---63---+ /--------- XP_009140933.1 [Brassica rapa] (32)
| | | | /---100---+
| | | | | \--------- GSBRNA2T00050363001 [Brassica napus] (47)
| | | | /---89---+
+ | | | | | /--------- XP_013635319.1 [Brassica oleracea] (97)
|---80---+ | | | \---100---+
| | | \---100---+ \--------- GSBRNA2T00127852001 [Brassica napus] (150)
| | | |
| | | | /--------- RrC19725_p1 [Raphanus raphanistrum] (79)
| | | \--------100-------+
| |----70---+ \--------- Rsa1.0_00494.1_g00005.1 [Raphanus sativus] (113)
| | |
| | |----------------------------------------------- RrC13548_p1 [Raphanus raphanistrum] (41)
| | |
| | | /--------- RrC56_p1 [Raphanus raphanistrum] (53)
| | |------------------88-----------------+
| | | \--------- Rsa1.0_03080.1_g00003.1 [Raphanus sativus] (138)
| | |
| | |----------------------------------------------- Tp4g11570 [Thellungiella parvula] (55)
| | |
| | \----------------------------------------------- 676773526 [Sisymbrium irio] (68)
| |
| \--------------------------------------------------------- KFK32262.1 [Arabis alpina] (121)
|
| /------------------- Bostr.27991s0045.1.p [Boechera stricta] (6)
| |
|----------------------63----------------------+ /--------- 901824 [Arabidopsis lyrata] (62)
| \----97---+
| \--------- AT2G28710.1 [Arabidopsis thaliana] (78)
|
| /--------- (276)
\---------------------------58---------------------------+
\--------- AA32G00844 [Aethionema arabicum] (143)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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