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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM545
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 231:
/----- EcS751352.10 [Eucalyptus camaldulensis] (2)
/------------------------100-----------------------+
| \----- Eucgr.F00378.1.p [Eucalyptus grandis] (98)
|
| /----- 676719170 [Sisymbrium irio] (3)
| /-----------------58----------------+
| | \----- KFK32818.1 [Arabis alpina] (135)
| |
| | /----- Cagra.1080s0021.1.p [Capsella grandiflora] (4)
| |----------------100----------------+
| | \----- Carubv10023682m [Capsella rubella] (6)
| |
| | /----- GSBRNA2T00032865001 [Brassica napus] (7)
| | /-77-+
| | | \----- GSBRNA2T00032864001 [Brassica napus] (136)
| | /-66-+
| | | \---------- XP_009140353.1 [Brassica rapa] (47)
| |-----------100-----------+
| | | /----- GSBRNA2T00149729001 [Brassica napus] (12)
| | \---100---+
| | \----- XP_013631195.1 [Brassica oleracea] (84)
| |
| | /---------- AT4G40060.1 [Arabidopsis thaliana] (13)
| | |
| | /---100---+ /----- 490793 [Arabidopsis lyrata] (79)
| | | \-100+
| | | \----- Araha.1153s0001.1.p [Arabidopsis halleri] (110)
| | |
| | | /----- Carubv10005341m [Capsella rubella] (22)
| | | /---100---+
| | | | \----- Cagra.5414s0037.1.p [Capsella grandiflora] (114)
| | /----72---+ |
| | | |-99-+ /----- Csa10g002940.1 [Camelina sativa] (70)
| | | | | /-99-+
| | | | | | \----- Csa11g003300.1 [Camelina sativa] (88)
| | | | \-100+
| | | | \---------- Csa12g002970.1 [Camelina sativa] (130)
| | | |
| | | \-------------------- Bostr.25542s0202.1.p [Boechera stricta] (113)
| | |
| | | /----- RrC2708_p1 [Raphanus raphanistrum] (21)
| | | /---100---+
| | | | \----- Rsa1.0_02161.1_g00005.1 [Raphanus sativus] (140)
| | | |
| | /--99-+ /-100+ /----- XP_013623152.1 [Brassica oleracea] (29)
| | | | | | /-100+
| | | | | | | \----- GSBRNA2T00067972001 [Brassica napus] (73)
| | | | | \-100+
| | | | /-100+ | /----- GSBRNA2T00150974001 [Brassica napus] (63)
| | | | | | \-100+
| | | | | | \----- XP_009109426.1 [Brassica rapa] (170)
| | | | | |
| | | | | \-------------------- KFK30396.1 [Arabis alpina] (94)
| | | | |
| | | | | /----- XP_009130625.1 [Brassica rapa] (51)
| | | | | /-100+
| | | | | | \----- GSBRNA2T00121635001 [Brassica napus] (141)
| | | \-59-+ /-100+
| | | | | | /----- GSBRNA2T00131207001 [Brassica napus] (83)
| |-89-+ | | \-100+
| /----53---+ | | /-100+ \----- XP_013609150.1 [Brassica oleracea] (93)
| | | | | | |
| | | | | | | /----- Rsa1.0_06073.1_g00002.1 [Raphanus sativus] (56)
| | | | | | \---100---+
| | | | | | \----- RrC3392_p1 [Raphanus raphanistrum] (120)
| | | | \-88-+
| | | | | /----- 676744088 [Sisymbrium irio] (78)
| | | | | /-96-+
| | | | | | \----- Thhalv10025832m [Eutrema salsugineum] (110)
| | | | \----99---+
| | | | \---------- Tp7g35790 [Thellungiella parvula] (119)
| | | |
/-69-+ | | | /----- XP_010526667.1 [Tarenaya hassleriana] (118)
| | | | \--------------97--------------+
| | | | \----- XP_010555396.1 [Tarenaya hassleriana] (137)
| | | |
| | | | /----- Csa07g052530.1 [Camelina sativa] (15)
| | | | |
| | | |-----------------65----------------+----- Csa16g044190.1 [Camelina sativa] (57)
| | | | |
| | | | \----- Csa09g086760.1 [Camelina sativa] (65)
| | | |
| | | |----------------------------------------- GSBRNA2T00108336001 [Brassica napus] (16)
| | | |
| | | |----------------------------------------- Bostr.19427s0014.1.p [Boechera stricta] (17)
| | | |
| | | | /----- RrC23998_p1 [Raphanus raphanistrum] (23)
| | | |-----------------95----------------+
| | | | \----- Rsa1.0_02481.1_g00002.1 [Raphanus sativus] (58)
| | | |
| | | | /----- XP_013605522.1 [Brassica oleracea] (24)
| | | | /-100+
| | | | | \----- GSBRNA2T00127452001 [Brassica napus] (34)
| | | | /-88-+
| | | | | | /----- XP_009112528.1 [Brassica rapa] (87)
| | | | | \-100+
| | | |------------99-----------+ \----- GSBRNA2T00078194001 [Brassica napus] (160)
| | | | |
| | | | | /----- Rsa1.0_34622.1_g00001.1 [Raphanus sativus] (32)
| | | | \---100---+
| | | | \----- Rsa1.0_18670.1_g00001.1 [Raphanus sativus] (42)
| | | |
| | | | /----- Tp4g01450 [Thellungiella parvula] (36)
| | | |-----------------86----------------+
| | | | \----- Thhalv10000259m [Eutrema salsugineum] (133)
| | | |
| | | | /---------- AT2G22430.1 [Arabidopsis thaliana] (100)
| | | | |
| | | |--------------99--------------+ /----- 481105 [Arabidopsis lyrata] (140)
| | | | \-89-+
| | | | \----- Araha.3205s0024.1.p [Arabidopsis halleri] (122)
| | | |
| | | |----------------------------------------- AA46G00133 [Aethionema arabicum] (129)
| | | |
| | | \----------------------------------------- RrC5542_p2 [Raphanus raphanistrum] (131)
| | |
| | | /----- Gh_D12G0780 [Gossypium hirsutum] (5)
| | | /-99-+
| | | | \----- Gorai.008G091100.1 [Gossypium raimondii] (130)
| | | /-100+
| | | | \---------- Gh_A12G0771 [Gossypium hirsutum] (55)
| | | |
| | | | /----- Ciclev10026013m [Citrus clementina] (8)
| | | | /-100+
| | | | | \----- orange1.1g019540m [Citrus sinensis] (112)
| | | |-77-+
| | | | | /----- Neem_9814_f_1 [Azadirachta indica] (52)
| | | | \-100+
| | | | \----- Neem_28333_f_1 [Azadirachta indica] (61)
| | | |
| | | | /----- Gorai.003G041500.1 [Gossypium raimondii] (9)
| | | | /-68-+
| | | | | \----- Gh_D03G0374 [Gossypium hirsutum] (18)
| | | | |
| | | |-100+ /----- Gh_Sca028226G01 [Gossypium hirsutum] (66)
| | | | | |
| | | | \-97-+----- Cotton_A_11191_BGI-A2_v1.0 [Gossypium arboreum] (76)
| | | /-55-+ |
| | | | | \----- Gh_A02G1237 [Gossypium hirsutum] (123)
| | | | |
| | | | |--------------- XP_010523301.1 [Tarenaya hassleriana] (26)
| | | | |
| \-54-+ | |--------------- Thecc1EG001039t1 [Theobroma cacao] (31)
| | | |
| | | | /---------- Gh_D10G0992 [Gossypium hirsutum] (39)
| | | | |
| | | | | /----- Gh_A10G0774 [Gossypium hirsutum] (44)
| | | |-100+-100+
| |--------------55--------------+ | | \----- Cotton_A_24633_BGI-A2_v1.0 [Gossypium arboreum] (143)
| | | | |
| | | | \---------- Gorai.011G111500.1 [Gossypium raimondii] (82)
| | | |
| | | |--------------- evm.model.supercontig_55.70 [Carica papaya] (115)
| | | |
--99-+ | | \--------------- Eucgr.H04742.1.p [Eucalyptus grandis] (132)
| | |
| | | /----- Gh_D11G2140 [Gossypium hirsutum] (27)
| | | /-63-+
| | | | \----- Gorai.007G235200.1 [Gossypium raimondii] (128)
| | \---100---+
| | \---------- Gh_A11G1855 [Gossypium hirsutum] (33)
| |
| | /----- orange1.1g019954m [Citrus sinensis] (11)
| | /----------------100----------------+
| | | \----- Ciclev10024310m [Citrus clementina] (74)
| | |
| | | /------------------------------ evm.model.supercontig_1379.1 [Carica papaya] (14)
| | | |
| | | | /----- Gh_D02G1724 [Gossypium hirsutum] (25)
| | | | /-63-+
| | | | | \----- Gorai.005G189800.1 [Gossypium raimondii] (81)
| | | | /-100+
| | | | | | /----- Gh_A03G1284 [Gossypium hirsutum] (68)
| | | /--86-+ | \-99-+
| | | | | /-97-+ \----- Cotton_A_19290_BGI-A2_v1.0 [Gossypium arboreum] (85)
| | | | | | |
| | | | | /-97-+ \--------------- Cotton_A_33264_BGI-A2_v1.0 [Gossypium arboreum] (28)
| | | | | | |
| | | | | | \-------------------- Thecc1EG009970t1 [Theobroma cacao] (180)
| | | | | |
| | | | \-85-+ /----- Ciclev10032229m [Citrus clementina] (35)
| | |-68-+ | /-100+
| | | | | | \----- orange1.1g028655m [Citrus sinensis] (89)
| | | | \------100-----+
| | | | | /----- Neem_615_f_5 [Azadirachta indica] (59)
| | | | \-100+
| | | | \----- Neem_21804_f_1 [Azadirachta indica] (86)
| | | |
| | | | /----- Eucgr.B03409.1.p [Eucalyptus grandis] (45)
| | | \--------------100-------------+
| | | \----- EcC000125.10 [Eucalyptus camaldulensis] (121)
| | |
| | /-79-+ /----- Gorai.008G190300.1 [Gossypium raimondii] (19)
| | | | /-100+
| | | | | \----- Gh_D12G1725 [Gossypium hirsutum] (142)
| | | | /-91-+
| | | | | \---------- Cotton_A_25802_BGI-A2_v1.0 [Gossypium arboreum] (48)
| | | | /-100+
| | | | | \--------------- Gh_A12G2639 [Gossypium hirsutum] (41)
| | | | /-98-+
| | | | | \-------------------- Thecc1EG013821t2 [Theobroma cacao] (80)
| | | | |
| | | | | /----- Gh_D07G0654 [Gossypium hirsutum] (54)
| | | |-------90------+ /-100+
| | | | | | \----- Gorai.001G073600.1 [Gossypium raimondii] (60)
| | | | | /-100+
| | | | | | \---------- Gh_A07G0585 [Gossypium hirsutum] (64)
| |-82-+ | \---100---+
| | | | \--------------- Cotton_A_02692_BGI-A2_v1.0 [Gossypium arboreum] (72)
| | | |
| | | |----------------------------------------- evm.model.supercontig_17.200 [Carica papaya] (38)
| | | |
| | | |----------------------------------------- Gh_D03G0850 [Gossypium hirsutum] (40)
| | | |
| | | |----------------------------------------- Csa22754s010.1 [Camelina sativa] (43)
| | | |
| | | | /----- Eucgr.B00423.1.p [Eucalyptus grandis] (125)
| | | |----------------100----------------+
| | | | \----- EcC027177.10 [Eucalyptus camaldulensis] (138)
| | | |
| | | \----------------------------------------- Rsa1.0_41930.1_g00001.1 [Raphanus sativus] (134)
| | |
| | \---------------------------------------------- AA39G00606 [Aethionema arabicum] (126)
| |
| \--------------------------------------------------- AA54G00108 [Aethionema arabicum] (150)
|
| /----- Neem_25464_f_1 [Azadirachta indica] (37)
| /-100+
| | \----- Neem_9905_f_2 [Azadirachta indica] (91)
|------------------------99------------------------+
| | /----- Ciclev10002182m [Citrus clementina] (90)
| \-100+
| \----- orange1.1g024675m [Citrus sinensis] (95)
|
| /----- XP_010543827.1 [Tarenaya hassleriana] (69)
\---------------------------59--------------------------+
\----- evm.model.supercontig_36.180 [Carica papaya] (117)
Root part of tree:
/------------------------------------------------------------------ Gh_D09G1239 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------ Gh_D08G1853 [Gossypium hirsutum] (111)
|
| /--------- Gh_D12G0450 [Gossypium hirsutum] (75)
|---------------------------100--------------------------+
| \--------- Gh_D10G0770 [Gossypium hirsutum] (139)
|
| /--------- (231)
| /----92---+
| | \--------- Thecc1EG034849t1 [Theobroma cacao] (53)
| |
| /--------99--------+ /--------- Gorai.009G233900.1 [Gossypium raimondii] (67)
| | | |
| | | |--------- Gh_A05G1913 [Gossypium hirsutum] (92)
| | \---100---+
| | |--------- Gh_D05G2148 [Gossypium hirsutum] (99)
| | |
+ /---99---+ \--------- Cotton_A_26519_BGI-A2_v1.0 [Gossypium arboreum] (116)
| | |
| | | /---------------------------- Gh_A06G0266 [Gossypium hirsutum] (20)
| | | |
| | | | /------------------- Gh_D11G2639 [Gossypium hirsutum] (50)
| | | | |
| | \----86---+---94---+ /--------- Gh_D06G0289 [Gossypium hirsutum] (120)
| | | \----68---+
| | | \--------- Gorai.010G037800.1 [Gossypium raimondii] (124)
| | |
| /----99---+ \---------------------------- Cotton_A_02815_BGI-A2_v1.0 [Gossypium arboreum] (96)
| | |
| | | /--------- Gh_A11G1037 [Gossypium hirsutum] (30)
| | |-----------------100-----------------+
| | | \--------- Gh_D13G1514 [Gossypium hirsutum] (46)
| | |
| | |----------------------------------------------- Gorai.008G075100.1 [Gossypium raimondii] (62)
| | |
\---100--+ |----------------------------------------------- Gorai.007G140200.1 [Gossypium raimondii] (71)
| |
| \----------------------------------------------- Gorai.003G035400.1 [Gossypium raimondii] (127)
|
| /--------- Gorai.004G113700.1 [Gossypium raimondii] (10)
| |
| |--------- Gorai.006G273000.1 [Gossypium raimondii] (49)
| |
\-----------------------99----------------------+--------- Gorai.007G229700.1 [Gossypium raimondii] (77)
|
|--------- Gh_D08G0905 [Gossypium hirsutum] (97)
|
\--------- Gh_D01G1287 [Gossypium hirsutum] (190)
|
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