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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM553
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 223:
/--------------- Thecc1EG038442t1 [Theobroma cacao] (2)
|
| /---------- Gh_D04G0842 [Gossypium hirsutum] (49)
/-51-+ |
| | | /----- Cotton_A_41232_BGI-A2_v1.0 [Gossypium arboreum] (82)
| \-100+-100+
| | \----- Gh_A04G1351 [Gossypium hirsutum] (95)
| |
/-100+ \---------- Gorai.012G098200.1 [Gossypium raimondii] (127)
| |
| | /----- Gh_A05G0024 [Gossypium hirsutum] (26)
| | /-100+
| | | \----- Cotton_A_16267_BGI-A2_v1.0 [Gossypium arboreum] (131)
| \---100---+
/-99-+ | /----- Gorai.009G008800.1 [Gossypium raimondii] (72)
| | \-57-+
| | \----- Gh_D05G0071 [Gossypium hirsutum] (73)
| |
| | /---------- Neem_5877_f_5 [Azadirachta indica] (29)
/--99-+ | |
| | \------100-----+ /----- Ciclev10010237m [Citrus clementina] (110)
| | \-100+
| | \----- orange1.1g018923m [Citrus sinensis] (114)
/-74-+ |
| | \------------------------------ evm.model.supercontig_199.10 [Carica papaya] (80)
| |
/-99-+ \------------------------------------ Eucgr.C02520.1.p [Eucalyptus grandis] (10)
| |
| \----------------------------------------- Eucgr.C00238.1.p [Eucalyptus grandis] (190)
|
| /----- Gh_A05G0999 [Gossypium hirsutum] (18)
| /-51-+
| | \----- Cotton_A_17105_BGI-A2_v1.0 [Gossypium arboreum] (20)
| /-100+
| | | /----- Gorai.009G122000.1 [Gossypium raimondii] (38)
/------93------+ | \-100+
| | /-88-+ \----- Gh_D05G1117 [Gossypium hirsutum] (120)
| | | |
| | | \--------------- Thecc1EG027569t1 [Theobroma cacao] (90)
| | |
| | /-63-+ /----- Neem_5261_f_1 [Azadirachta indica] (32)
| | | | /-100+
| | | | | \----- Neem_22260_f_1 [Azadirachta indica] (55)
| | | \---100---+
| \---------70---------+ | /----- Ciclev10025985m [Citrus clementina] (81)
| | \-100+
| | \----- orange1.1g018990m [Citrus sinensis] (140)
| |
| \------------------------- Eucgr.F03987.1.p [Eucalyptus grandis] (113)
|
| /----- Gh_D07G2191 [Gossypium hirsutum] (3)
| /-82-+
| | \----- Gorai.001G256900.1 [Gossypium raimondii] (63)
| /---100---+
| | | /----- Cotton_A_19437_BGI-A2_v1.0 [Gossypium arboreum] (116)
| | \-100+
| | \----- Gh_A07G1973 [Gossypium hirsutum] (132)
| |
| | /----- Gh_D09G0206 [Gossypium hirsutum] (37)
| /-56-+ /-99-+
| | | | \----- Gorai.006G025100.1 [Gossypium raimondii] (51)
| | | /-100+
| | | | | /----- Cotton_A_28204_BGI-A2_v1.0 [Gossypium arboreum] (98)
| | | | \-100+
| | | | \----- Gh_A09G0218 [Gossypium hirsutum] (135)
| | \-100+
| | | /----- Gorai.006G025200.1 [Gossypium raimondii] (42)
| /-94-+ | /-100+
| | | | | \----- Gh_D09G0207 [Gossypium hirsutum] (137)
| | | \-100+
| | | \---------- Gh_A09G0219 [Gossypium hirsutum] (121)
| | |
| | | /--------------- Gh_D04G0466 [Gossypium hirsutum] (77)
| | | |
| /--95-+ | | /----- Cotton_A_29003_BGI-A2_v1.0 [Gossypium arboreum] (94)
| | | \---100---+ /-100+
| | | | | \----- Gh_A05G3160 [Gossypium hirsutum] (126)
| | | \-93-+
| | | \---------- Gorai.012G056300.1 [Gossypium raimondii] (96)
| | |
| | \------------------------------ Thecc1EG018386t1 [Theobroma cacao] (6)
| |
| |------------------------------------ Eucgr.J02131.1.p [Eucalyptus grandis] (9)
| |
| /-62-+ /----- Neem_17075_f_1 [Azadirachta indica] (15)
| | | /-100+
| | | | \----- Neem_38613_f_1 [Azadirachta indica] (139)
--85-+ | |-----------100-----------+
| | | | /----- Ciclev10013824m [Citrus clementina] (150)
| | | \-100+
| | | \----- orange1.1g042319m [Citrus sinensis] (118)
| | |
| | |------------------------------------ evm.model.supercontig_14.38 [Carica papaya] (22)
| | |
| | \------------------------------------ Eucgr.I01921.1.p [Eucalyptus grandis] (56)
| |
| | /----- Cotton_A_06134_BGI-A2_v1.0 [Gossypium arboreum] (24)
| /-50-+ /-100+
| | | | \----- Gh_A12G1529 [Gossypium hirsutum] (84)
| | | /-100+
| | | | | /----- Gh_D12G1652 [Gossypium hirsutum] (66)
| | | | \-96-+
| | | /-100+ \----- Gorai.008G182500.1 [Gossypium raimondii] (86)
| | | | |
| | | | \--------------- Thecc1EG011797t1 [Theobroma cacao] (134)
| | | |
| /-67-+ | /-51-+ /----- Ciclev10033673m [Citrus clementina] (27)
| | | | | | /-100+
| | | | | | | \----- orange1.1g043551m [Citrus sinensis] (40)
| | | \-------63------+ \----70---+
| | | | \---------- Neem_944_f_6 [Azadirachta indica] (53)
| | | |
| | | \------------------------- evm.TU.contig_28586.3 [Carica papaya] (119)
| | |
| /-57-+ \---------------------------------------------- Eucgr.B03412.1.p [Eucalyptus grandis] (79)
| | |
| | | /----- RrC15642_p1 [Raphanus raphanistrum] (19)
| | | /-100+
| | | | \----- XP_010535324.1 [Tarenaya hassleriana] (23)
| | | /-54-+
| | | | \---------- RrC1832_p1 [Raphanus raphanistrum] (35)
| | \----------------100----------------+
| | \--------------- Neem_21539_f_1 [Azadirachta indica] (129)
| |
| | /----- GSBRNA2T00098740001 [Brassica napus] (4)
| | /-100+
| | | \----- XP_009103913.1 [Brassica rapa] (112)
| | /-100+
| | | \---------- XP_013588816.1 [Brassica oleracea] (59)
| | /-100+
| | | | /----- RrC1460_p1 [Raphanus raphanistrum] (92)
| | | \---100---+
| | | \----- Rsa1.0_02428.1_g00001.1 [Raphanus sativus] (130)
| | |
| | /----51---+ /----- Rsa1.0_01783.1_g00002.1 [Raphanus sativus] (74)
| | | | /----65---+
| | | | | \----- RrC2497_p4 [Raphanus raphanistrum] (130)
| | | | |
| | | \-65-+ /----- GSBRNA2T00129553001 [Brassica napus] (99)
\-92-+ | | /-100+
| | | | \----- XP_009116120.1 [Brassica rapa] (138)
| | \-100+
| | | /----- GSBRNA2T00109003001 [Brassica napus] (170)
| | \-100+
| | \----- XP_013600367.1 [Brassica oleracea] (110)
| |
| | /----- Gorai.011G225700.1 [Gossypium raimondii] (8)
| | /-100+
| | | \----- Gh_D10G2551 [Gossypium hirsutum] (133)
| | /-100+
| | | | /----- Gh_A10G1731 [Gossypium hirsutum] (11)
| | | \-100+
| | /-99-+ \----- Cotton_A_24703_BGI-A2_v1.0 [Gossypium arboreum] (17)
| | | |
| | /-100+ \--------------- Thecc1EG044588t1 [Theobroma cacao] (111)
| | | |
| | | \-------------------- Gorai.013G003400.1 [Gossypium raimondii] (124)
| |-80-+
| | | /----- orange1.1g036423m [Citrus sinensis] (60)
| | \--------100--------+
| | \----- Ciclev10003896m [Citrus clementina] (67)
| |
| |------------------------------ Tp5g08070 [Thellungiella parvula] (25)
| |
\-----------100-----------+------------------------------ Thhalv10010394m [Eutrema salsugineum] (28)
|
| /----- XP_010550826.1 [Tarenaya hassleriana] (31)
|-----------63-----------+
| \----- XP_010554502.1 [Tarenaya hassleriana] (78)
|
| /----- Cagra.0562s0024.1.p [Capsella grandiflora] (36)
| /---100---+
| | \----- Carubv10018845m [Capsella rubella] (125)
| |
| /-87-+ /---------- Csa06g028810.1 [Camelina sativa] (88)
| | | |
| | \-100+ /----- Csa04g040400.1 [Camelina sativa] (115)
| | \-100+
| /-95-+ \----- Csa09g064030.1 [Camelina sativa] (122)
| | |
| | | /----- 485830 [Arabidopsis lyrata] (47)
|-100+ \------100-----+
| | \----- AT3G54320.1 [Arabidopsis thaliana] (68)
| |
| \------------------------- Bostr.0697s0045.1.p [Boechera stricta] (71)
|
|------------------------------ Eucgr.G02636.1.p [Eucalyptus grandis] (46)
|
|------------------------------ 676763662 [Sisymbrium irio] (61)
|
|------------------------------ Eucgr.J00316.1.p [Eucalyptus grandis] (62)
|
|------------------------------ KFK34667.1 [Arabis alpina] (83)
|
\------------------------------ evm.model.supercontig_54.28 [Carica papaya] (128)
Subtree rooted at node 246:
/---------- (223)
|
/-------------------85-------------------+ /----- XP_010532069.1 [Tarenaya hassleriana] (21)
| \-100+
| \----- XP_010537864.1 [Tarenaya hassleriana] (87)
|
| /----- Rsa1.0_00065.1_g00040.1 [Raphanus sativus] (7)
| /---100---+
| | \----- RrC4585_p1 [Raphanus raphanistrum] (57)
| |
| /-100+ /----- GSBRNA2T00054200001 [Brassica napus] (30)
| | | /-76-+
| | | | \----- XP_013638688.1 [Brassica oleracea] (69)
| | \-96-+
| /-100+ | /----- GSBRNA2T00057936001 [Brassica napus] (54)
| | | \-100+
| | | \----- XP_009149048.1 [Brassica rapa] (70)
| /----61----+ |
| | | \-------------------- 676726830 [Sisymbrium irio] (97)
| | |
| | \------------------------- Thhalv10008118m [Eutrema salsugineum] (45)
/-100+ |
| | | /----- Csa03g019870.1 [Camelina sativa] (13)
| | | /-74-+
| | | | \----- Csa17g021650.1 [Camelina sativa] (41)
| | | /-99-+
| | | | \---------- Csa14g020190.1 [Camelina sativa] (44)
| | /-56-+ /-99-+
| | | | | | /----- Carubv10010918m [Capsella rubella] (91)
| | | | | \---100---+
| | | | /-99-+ \----- Cagra.2238s0017.1.p [Capsella grandiflora] (100)
| | | | | |
| | | | | \-------------------- Bostr.7128s0222.1.p [Boechera stricta] (58)
| | | | /-99-+
/-100+ | | | | | /----- AT1G16060.1 [Arabidopsis thaliana] (50)
| | | /-85-+ | | | |
| | | | | | | \--------100--------+----- 471806 [Arabidopsis lyrata] (64)
| | | | | \--68-+ |
| | | | | | \----- Araha.6467s0004.1.p [Arabidopsis halleri] (180)
| | | | | |
| | \-85-+ | \------------------------------ KFK43842.1 [Arabis alpina] (93)
--96-+ | | |
| | | \----------------------------------------- Tp1g14370 [Thellungiella parvula] (16)
| | |
| | \---------------------------------------------- AA37G00143 [Aethionema arabicum] (75)
| |
| \-------------------------------------------------------- AA31G00833 [Aethionema arabicum] (14)
|
\------------------------------------------------------------- KFK42486.1 [Arabis alpina] (136)
Root part of tree:
/------------------------------------------------------------------ Cagra.1725s0044.1.p [Capsella grandiflora] (1)
|
|------------------------------------------------------------------ Carubv10020688m [Capsella rubella] (123)
|
| /-------------------------------------------- (246)
| |
| | /------- GSBRNA2T00146328001 [Brassica napus] (12)
| | /--100--+
| | | \------- XP_009106692.1 [Brassica rapa] (34)
| | /--100-+
| | | | /------- XP_013587864.1 [Brassica oleracea] (52)
| | | \--100--+
| /--100-+ /--100-+ \------- GSBRNA2T00148122001 [Brassica napus] (76)
| | | | |
+ | | | | /------- Rsa1.0_01251.1_g00003.1 [Raphanus sativus] (39)
| | | | \------100-----+
| | | /---50--+ \------- RrC6144_p1 [Raphanus raphanistrum] (48)
| | | | |
| | | | |----------------------------- 676742804 [Sisymbrium irio] (85)
| /--100--+ \--84--+ |
| | | | \----------------------------- Thhalv10018877m [Eutrema salsugineum] (120)
| | | |
| | | \------------------------------------- Tp5g34760 [Thellungiella parvula] (89)
| | |
| | | /--------------- AT1G79700.2 [Arabidopsis thaliana] (5)
| | | |
| | \----------------100----------------+ /------- Araha.29413s0001.1.p [Arabidopsis halleri] (43)
\--100-+ \--100--+
| \------- 477146 [Arabidopsis lyrata] (117)
|
|----------------------------------------------------------- Bostr.20129s0410.1.p [Boechera stricta] (33)
|
| /--------------- Csa07g058830.1 [Camelina sativa] (65)
| |
\--------------------100--------------------+ /------- Csa16g049360.1 [Camelina sativa] (140)
\---92--+
\------- Csa09g093970.1 [Camelina sativa] (160)
|
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