![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM5548
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 89:
/----- GSBRNA2T00128323001 [Brassica napus] (3)
/-100+
| \----- XP_009102547.1 [Brassica rapa] (12)
/-100+
| | /----- GSBRNA2T00142760001 [Brassica napus] (20)
| \-100+
/-100-+ \----- XP_013597072.1 [Brassica oleracea] (26)
| |
| | /----- RrC5222_p1 [Raphanus raphanistrum] (17)
/-97-+ \---100---+
| | \----- Rsa1.0_04605.1_g00002.1 [Raphanus sativus] (23)
| |
| \--------------------- 676794544 [Sisymbrium irio] (24)
/-74-+
| | /----- RrC4438_p3 [Raphanus raphanistrum] (36)
| | /-100+
| | | \----- Rsa1.0_00169.1_g00004.1 [Raphanus sativus] (45)
| \------100------+
/-99-+ | /----- XP_013618564.1 [Brassica oleracea] (37)
| | \-100+
| | \----- XP_009106193.1 [Brassica rapa] (39)
/-68-+ |
| | \------------------------------- Tp3g21790 [Thellungiella parvula] (10)
| |
| \------------------------------------ Thhalv10002558m [Eutrema salsugineum] (34)
|
/-86-+ /----- RrC9504_p1 [Raphanus raphanistrum] (6)
| | /---100---+
| | | \----- Rsa1.0_28455.1_g00001.1 [Raphanus sativus] (49)
| | |
| \-----------100-----------+ /----- XP_009135875.1 [Brassica rapa] (7)
| | /-100+
| | | \----- GSBRNA2T00154882001 [Brassica napus] (48)
| \-100+
| | /----- XP_013622358.1 [Brassica oleracea] (27)
| \-100+
| \----- GSBRNA2T00158357001 [Brassica napus] (44)
|
| /----- Araha.9810s0006.1.p [Arabidopsis halleri] (5)
| /-93-+
| | \----- 898955 [Arabidopsis lyrata] (46)
/-100-+ /-------93------+
| | | \---------- AT3G24140.1 [Arabidopsis thaliana] (21)
| | |
| | | /--------------------- Bostr.19424s0222.1.p [Boechera stricta] (11)
| | /----99---+ |
| | | | | /----- Csa01g029870.1 [Camelina sativa] (13)
| | | | | /-97-+
| | | \-99-+ | \----- Csa19g035800.1 [Camelina sativa] (15)
| | | | /-100+
| | | | | \---------- Csa15g048420.1 [Camelina sativa] (47)
| | | \--95-+
| | | | /----- Carubv10013821m [Capsella rubella] (16)
| | | \---100---+
| | | \----- Cagra.0026s0026.1.p [Capsella grandiflora] (40)
| | |
/-100+ \---100---+ /--------------- XP_009107621.1 [Brassica rapa] (8)
| | | |
| | | | /----- GSBRNA2T00042382001 [Brassica napus] (29)
| | | /-100-+ /-97-+
| | | | | | \----- GSBRNA2T00002574001 [Brassica napus] (38)
| | | | \-96-+
| | | /-89-+ \---------- XP_013631585.1 [Brassica oleracea] (35)
| | | | |
| | | /-100+ \--------------------- 676793050 [Sisymbrium irio] (25)
/-100+ | | | |
| | | \-100+ \-------------------------- Tp3g21660 [Thellungiella parvula] (43)
| | | |
| | | \------------------------------- Thhalv10002990m [Eutrema salsugineum] (22)
| | |
| | \---------------------------------------------------- AA50G00006 [Aethionema arabicum] (19)
--97-+ |
| | /----- XP_010532793.1 [Tarenaya hassleriana] (9)
| \-------------------------90------------------------+
| \----- XP_010527480.1 [Tarenaya hassleriana] (33)
|
\-------------------------------------------------------------- evm.model.supercontig_59.132 [Carica papaya] (31)
Root part of tree:
/------------------------------------------------------------------- orange1.1g014446m [Citrus sinensis] (1)
|
|------------------------------------------------------------------- Ciclev10005031m [Citrus clementina] (14)
|
| /---------------------- Gh_A10G1098 [Gossypium hirsutum] (2)
| |
| /----100---+ /----------- Gorai.011G159100.1 [Gossypium raimondii] (28)
| | \----100---+
+ /-----87----+ \----------- Gh_D10G1411 [Gossypium hirsutum] (42)
| | |
| | \--------------------------------- Thecc1EG020336t1 [Theobroma cacao] (18)
| /----100---+
| | | /---------------------- (89)
| | | |
| | \----------89----------+ /----------- EcC053464.10 [Eucalyptus camaldulensis] (32)
\----100---+ \----100---+
| \----------- Eucgr.H02788.1.p [Eucalyptus grandis] (41)
|
| /----------- Neem_1853_f_2 [Azadirachta indica] (4)
\---------------------100--------------------+
\----------- Neem_28893_f_1 [Azadirachta indica] (30)
|




