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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM566
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 214:
/----- GSBRNA2T00055802001 [Brassica napus] (2)
/-100+
| \----- XP_013613614.1 [Brassica oleracea] (89)
/-100+
| | /----- GSBRNA2T00064764001 [Brassica napus] (84)
| \-100+
/-100+ \----- XP_009130508.1 [Brassica rapa] (91)
| |
| | /----- Rsa1.0_00073.1_g00025.1 [Raphanus sativus] (98)
/-53-+ \---100---+
| | \----- RrC6078_p4 [Raphanus raphanistrum] (115)
| |
/---------52---------+ \-------------------- 676752358 [Sisymbrium irio] (8)
| |
| \------------------------- Tp2g28440 [Thellungiella parvula] (82)
|
| /---------- XP_010527496.1 [Tarenaya hassleriana] (4)
| |
| /-81-+ /----- XP_010523119.1 [Tarenaya hassleriana] (29)
| | \-100+
| | \----- XP_010523118.1 [Tarenaya hassleriana] (53)
|--------------66--------------+
| | /----- XP_010528984.1 [Tarenaya hassleriana] (10)
| \---100---+
| \----- XP_010535624.1 [Tarenaya hassleriana] (50)
|
| /----- XP_010530332.1 [Tarenaya hassleriana] (12)
|-------------------100------------------+
| \----- XP_010549187.1 [Tarenaya hassleriana] (41)
|
| /----- RrC2096_p5 [Raphanus raphanistrum] (13)
| /-100+
| | \----- Rsa1.0_07073.1_g00002.1 [Raphanus sativus] (111)
| /---100---+
| | \---------- XP_013624242.1 [Brassica oleracea] (59)
| |
| | /----- XP_009112576.1 [Brassica rapa] (24)
| | /-100+
| /-64-+ | \----- GSBRNA2T00005560001 [Brassica napus] (60)
| | | /-100+
| | | | | /----- GSBRNA2T00101318001 [Brassica napus] (65)
| | | | \-100+
| | \-100+ \----- XP_013592561.1 [Brassica oleracea] (123)
| | |
| | | /----- RrC370_p4 [Raphanus raphanistrum] (58)
| | \---100---+
| | \----- Rsa1.0_03316.1_g00003.1 [Raphanus sativus] (67)
| |
| /-80-+ /----- XP_013583243.1 [Brassica oleracea] (20)
| | | /-100+
| | | | \----- GSBRNA2T00107626001 [Brassica napus] (150)
| | | /-100+
| | | | | /----- XP_009146116.1 [Brassica rapa] (78)
| | | | \-100+
| | | /-100+ \----- GSBRNA2T00153974001 [Brassica napus] (90)
| /--92-+ | | |
| | | | | | /----- RrC6340_p3 [Raphanus raphanistrum] (37)
| | | \-60-+ \---100---+
| | | | \----- Rsa1.0_00279.1_g00020.1 [Raphanus sativus] (130)
| | | |
| /-92-+ | \-------------------- 676716702 [Sisymbrium irio] (77)
| | | |
| | | \------------------------------ Tp3g16720 [Thellungiella parvula] (160)
|-91-+ |
| | \------------------------------------ Thhalv10022126m [Eutrema salsugineum] (49)
| |
| \----------------------------------------- KFK39215.1 [Arabis alpina] (19)
|
| /---------- AT3G18650.1 [Arabidopsis thaliana] (16)
| |
/-50-+ /------97------+ /----- Araha.15805s0005.1.p [Arabidopsis halleri] (23)
| | | \-100+
| | | \----- 479371 [Arabidopsis lyrata] (97)
| | |
| | | /----- Cagra.1681s0033.1.p [Capsella grandiflora] (33)
| | | /---100---+
| |---------55---------+ | \----- Carubv10015986m [Capsella rubella] (116)
| | | |
| | | /-63-+ /---------- Csa19g026030.1 [Camelina sativa] (39)
| | | | | |
| | | | \-63-+ /----- Csa15g025250.1 [Camelina sativa] (47)
| | | | \-52-+
| | \-59-+ \----- Csa01g021520.1 [Camelina sativa] (118)
| | |
| | | /---------- Bostr.19424s0797.1.p [Boechera stricta] (57)
| | | |
| | \---100---+ /----- Bostr.25375s0045.1.p [Boechera stricta] (92)
| | \-100+
| | \----- Bostr.25375s0043.1.p [Boechera stricta] (112)
| |
| | /------------------------- Csa20g011700.1 [Camelina sativa] (18)
| | |
| | | /----- Carubv10028378m [Capsella rubella] (40)
| | | /------100-----+
| |---------84---------+ | \----- Bostr.0568s0255.1.p [Boechera stricta] (180)
| | | |
| | | | /----- 496768 [Arabidopsis lyrata] (43)
| | \-68-+ /---100---+
| | | | \----- Araha.44556s0002.1.p [Arabidopsis halleri] (88)
| | | |
| | \-80-+ /----- AT4G02235.1 [Arabidopsis thaliana] (45)
| | | /-51-+
| | | | \----- AT5G65330.1 [Arabidopsis thaliana] (48)
| | \-80-+
| | \---------- AT4G11250.1 [Arabidopsis thaliana] (94)
| |
| | /----- Csa07g033470.1 [Camelina sativa] (22)
| | /-100+
| | | \----- Csa07g032460.1 [Camelina sativa] (75)
| |----------------100----------------+
| | | /----- Csa16g026910.1 [Camelina sativa] (68)
| | \-100+
| | \----- Csa16g027910.1 [Camelina sativa] (72)
| |
| | /----- AA26G00658 [Aethionema arabicum] (28)
| |-------------------100------------------+
| | \----- AA26G00657 [Aethionema arabicum] (124)
| |
| |---------------------------------------------- orange1.1g040948m [Citrus sinensis] (31)
| |
| | /----- XP_010523638.1 [Tarenaya hassleriana] (34)
| | /-56-+
/-50-+ | | \----- XP_010555984.1 [Tarenaya hassleriana] (96)
| | |----------------100----------------+
| | | \---------- XP_010523639.1 [Tarenaya hassleriana] (80)
| | |
| | |---------------------------------------------- evm.model.supercontig_192.10 [Carica papaya] (110)
| | |
| | \---------------------------------------------- Thhalv10005313m [Eutrema salsugineum] (140)
| |
| | /----- Rsa1.0_01989.1_g00006.1 [Raphanus sativus] (17)
| | /-99-+
| | | \----- RrC578_p3 [Raphanus raphanistrum] (21)
| | /---------57--------+
| | | | /----- XP_013633147.1 [Brassica oleracea] (73)
| | | \-100+
| | | \----- GSBRNA2T00046841001 [Brassica napus] (170)
| | |
| | | /----- RrC877_p4 [Raphanus raphanistrum] (30)
| | /--53-+ /--------100--------+
| | | | | \----- Rsa1.0_00516.1_g00016.1 [Raphanus sativus] (120)
| | | | |
| | | | | /---------- Rsa1.0_04489.1_g00005.1 [Raphanus sativus] (36)
| | | | | |
| | | \-89-+ /-99-+ /----- RrC4790_p1 [Raphanus raphanistrum] (71)
| | | | | \-100+
| | | | /-81-+ \----- Rsa1.0_08500.1_g00001.1 [Raphanus sativus] (79)
| | | | | |
| | | \-99-+ \--------------- Rsa1.0_03930.1_g00002.1 [Raphanus sativus] (76)
| | | |
| | | \-------------------- Rsa1.0_00802.1_g00014.1 [Raphanus sativus] (122)
| | |
| | | /----- XP_013633153.1 [Brassica oleracea] (25)
| | | /-100+
| | | | \----- GSBRNA2T00062664001 [Brassica napus] (32)
| | | /------97------+
| | /-78-+ | | /----- XP_013633151.1 [Brassica oleracea] (42)
| | | | | \-100+
/-50-+ | | | | \----- GSBRNA2T00062655001 [Brassica napus] (64)
| | | | | |
| | | | | | /----- XP_009139966.1 [Brassica rapa] (26)
| | | | |----97----+ /-91-+
| | | | | | | \----- GSBRNA2T00080526001 [Brassica napus] (93)
| | | | | | /-97-+
| | | | | | | \---------- GSBRNA2T00046305001 [Brassica napus] (110)
| | | | | | /-100+
| | | | | | | \--------------- XP_009139952.1 [Brassica rapa] (70)
| | | /-100+ | \-100+
| | | | | | | /----- GSBRNA2T00080958001 [Brassica napus] (66)
| | | | | | \------100-----+
| | | | | | \----- XP_013633155.1 [Brassica oleracea] (87)
| | | | | |
| | | | | | /----- GSBRNA2T00080532001 [Brassica napus] (95)
| | | | | \--------------100-------------+
| | \-93-+ | \----- XP_009139964.1 [Brassica rapa] (125)
| | | |
| | | | /----- 676711826 [Sisymbrium irio] (44)
| | | \-----------------99----------------+
| | | \----- 676711806 [Sisymbrium irio] (190)
| | |
--50-+ | | /----- Thhalv10028184m [Eutrema salsugineum] (27)
| | \-------------------100------------------+
| | \----- Thhalv10028282m [Eutrema salsugineum] (51)
| |
| | /----- Bostr.3751s0039.1.p [Boechera stricta] (11)
| |------------------------84------------------------+
| | \----- Bostr.3751s0043.1.p [Boechera stricta] (100)
| |
| | /----- Carubv10007456m [Capsella rubella] (38)
| | /-100+
| | | \----- Carubv10015354m [Capsella rubella] (126)
| | /-98-+
| | | \---------- Carubv10007591m [Capsella rubella] (113)
| \-------------------100------------------+
| \--------------- Carubv10006654m [Capsella rubella] (121)
|
| /----- Bostr.3751s0031.1.p [Boechera stricta] (14)
| /-84-+
| | \----- Bostr.3751s0030.1.p [Boechera stricta] (35)
| /-60-+
| | \---------- Bostr.3751s0025.1.p [Boechera stricta] (74)
\----------------------52---------------------+
\--------------- Bostr.10058s0014.1.p [Boechera stricta] (62)
Root part of tree:
/------------------------------------------------------------------ Csa17g025910.1 [Camelina sativa] (1)
|
| /---------------------------------------- (214)
| |
| | /------- AT5G40220.1 [Arabidopsis thaliana] (3)
| | /-100-+
| | | \------- AT5G41200.1 [Arabidopsis thaliana] (56)
| | /--100-+
| | | \------------- AT5G40120.1 [Arabidopsis thaliana] (46)
| | /--91-+
| /--55-+ | \-------------------- AT5G38740.1 [Arabidopsis thaliana] (52)
| | | |
| | | /--56--+ /------- AT5G39750.1 [Arabidopsis thaliana] (63)
| | | | | /--99-+
| | | | | | \------- AT5G39810.1 [Arabidopsis thaliana] (81)
| | | | \-----100----+
| | | | \------------- AT5G37415.1 [Arabidopsis thaliana] (85)
| | | |
| | \--55--+ /------- 860242 [Arabidopsis lyrata] (5)
| | | /-100-+
| | | | \------- Araha.24544s0001.1.p [Arabidopsis halleri] (69)
| /--55--+ | /--63--+
| | | | | \------------- 493979 [Arabidopsis lyrata] (117)
| | | \-----63-----+
+ | | | /------- Araha.2369s0003.1.p [Arabidopsis halleri] (83)
| | | \-----100----+
| | | \------- 916318 [Arabidopsis lyrata] (99)
| | |
| | | /------- Csa17g095120.1 [Camelina sativa] (54)
| | | /-100-+
| /--55-+ | | \------- Csa17g094960.1 [Camelina sativa] (120)
| | | \---------------99---------------+
| | | | /------- Csa17g092430.1 [Camelina sativa] (86)
| | | \--73-+
| | | \------- Csa15g027790.1 [Camelina sativa] (114)
| | |
| | | /-------------------- Csa11g057180.1 [Camelina sativa] (9)
|--100-+ | |
| | | | /------- Csa10g046720.1 [Camelina sativa] (15)
| | \---------------100--------------+ /-100-+
| | | | \------- Csa01172s010.1 [Camelina sativa] (119)
| | \--100-+
| | \------------- Csa10g047360.1 [Camelina sativa] (61)
| |
| \----------------------------------------------------------- Csa12g081610.1 [Camelina sativa] (7)
|
| /------- Csa17g025890.1 [Camelina sativa] (6)
\----------------------------69----------------------------+
\------- Csa16470s010.1 [Camelina sativa] (55)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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