![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM6106
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 71:
/----- Neem_34357_f_1 [Azadirachta indica] (2)
/-100+
| \----- Neem_9097_f_1 [Azadirachta indica] (6)
/---------100--------+
| \---------- orange1.1g026950m [Citrus sinensis] (46)
|
| /----- Gh_A02G1304 [Gossypium hirsutum] (11)
| /-100+
| | \----- Cotton_A_11266_BGI-A2_v1.0 [Gossypium arboreum] (42)
/-74-+ /------100------+
| | | | /----- Gh_D03G0444 [Gossypium hirsutum] (17)
| | | \-100+
| | | \----- Gorai.003G048100.1 [Gossypium raimondii] (37)
| | |
| | | /--------------- Gh_D11G2246 [Gossypium hirsutum] (13)
| \-88-+ |
| | | /----- Cotton_A_40501_BGI-A2_v1.0 [Gossypium arboreum] (15)
/-61-+ | /--96-+ /-98-+
| | | | | | \----- Gh_A11G2016 [Gossypium hirsutum] (19)
| | | | \-84-+
| | \-82-+ \---------- Gorai.007G246500.1 [Gossypium raimondii] (24)
| | |
| | \--------------------- Thecc1EG001282t1 [Theobroma cacao] (44)
/-100+ |
| | | /----- Eucgr.I00305.1.p [Eucalyptus grandis] (34)
| | \--------------100-------------+
| | \----- EcC042117.10 [Eucalyptus camaldulensis] (36)
/-100-+ |
| | \----------------------------------------- evm.model.supercontig_72.18 [Carica papaya] (29)
| |
/-99-+ \---------------------------------------------- XP_010555312.1 [Tarenaya hassleriana] (9)
| |
| \---------------------------------------------------- AA20G00007 [Aethionema arabicum] (7)
|
| /---------- Csa12g002300.1 [Camelina sativa] (3)
| |
| /-100+ /----- Csa11g002440.1 [Camelina sativa] (22)
| | \-98-+
/-97-+ /--87-+ \----- Csa10g002200.1 [Camelina sativa] (35)
| | | |
| | | \--------------- Bostr.25542s0130.1.p [Boechera stricta] (5)
| | /-93-+
| | | | /----- Cagra.2374s0036.1.p [Capsella grandiflora] (32)
| | | \------100------+
| | | \----- Carubv10005178m [Capsella rubella] (40)
--57-+ \--------------89--------------+
| | /---------- AT4G39410.1 [Arabidopsis thaliana] (25)
| | |
| \------100------+ /----- 490719 [Arabidopsis lyrata] (27)
| \-100+
| \----- Araha.4538s0022.1.p [Arabidopsis halleri] (38)
|
\-------------------------------------------------------------- Thhalv10025869m [Eutrema salsugineum] (21)
Root part of tree:
/------------------------------------------------------------------- RrC408_p3 [Raphanus raphanistrum] (1)
|
|------------------------------------------------------------------- Rsa1.0_00019.1_g00036.1 [Raphanus sativus] (31)
|
| /------- (71)
| /------------------70-----------------+
| | \------- KFK30520.1 [Arabis alpina] (8)
| |
| | /------- GSBRNA2T00008736001 [Brassica napus] (4)
| | /--100--+
| | | \------- XP_009101879.1 [Brassica rapa] (16)
| | /--100-+
| | | | /------- XP_013596554.1 [Brassica oleracea] (26)
| /--100-+ | \--100--+
| | | /--100--+ \------- GSBRNA2T00100291001 [Brassica napus] (33)
+ | | | |
| | | | | /------- Rsa1.0_00211.1_g00012.1 [Raphanus sativus] (28)
| | | /--98--+ \------100-----+
| | | | | \------- RrC5539_p2 [Raphanus raphanistrum] (41)
| | | | |
| | | | \------------------------------ Tp7g36450 [Thellungiella parvula] (20)
| | \---51--+
| | | /---------------------- Rsa1.0_03607.1_g00003.1 [Raphanus sativus] (12)
| /--100--+ | |
| | | | | /--------------- XP_009109469.1 [Brassica rapa] (18)
| | | \------100-----+ |
| | | | |--------------- GSBRNA2T00023551001 [Brassica napus] (30)
| | | \--100-+
| | | | /------- XP_013626266.1 [Brassica oleracea] (39)
| | | \---54--+
\--100-+ | \------- GSBRNA2T00061142001 [Brassica napus] (45)
| |
| \---------------------------------------------------- 676744086 [Sisymbrium irio] (14)
|
| /------- XP_009121710.1 [Brassica rapa] (10)
| /--100--+
| | \------- GSBRNA2T00073974001 [Brassica napus] (23)
\---------------------97---------------------+
\--------------- XP_013583309.1 [Brassica oleracea] (43)
|




