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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM621
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 170:
/-------------------- RrC1414_p2 [Raphanus raphanistrum] (3)
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| /----- GSBRNA2T00095944001 [Brassica napus] (15)
| /-100+
/-100+ | \----- XP_013604917.1 [Brassica oleracea] (72)
| | /-100+
| | | | /----- GSBRNA2T00023184001 [Brassica napus] (84)
| | | \-100+
| \-100+ \----- XP_009108302.1 [Brassica rapa] (180)
| |
| | /----- RrC21993_p1 [Raphanus raphanistrum] (39)
| \---100---+
/-100+ \----- Rsa1.0_00288.1_g00010.1 [Raphanus sativus] (190)
| |
| | /----- XP_013602599.1 [Brassica oleracea] (9)
| | /-100+
| | | \----- GSBRNA2T00058940001 [Brassica napus] (124)
| | |
/-100-+ | | /----- XP_009144653.1 [Brassica rapa] (11)
| | \------100-----+-100+
| | | \----- GSBRNA2T00075747001 [Brassica napus] (139)
| | |
/-100+ | \---------- RrC17833_p1 [Raphanus raphanistrum] (89)
| | |
| | \------------------------------ 676713906 [Sisymbrium irio] (23)
/-100+ |
| | \------------------------------------ Tp7g16960 [Thellungiella parvula] (44)
| |
| \----------------------------------------- Thhalv10024887m [Eutrema salsugineum] (80)
|
| /----- Cagra.3356s0014.1.p [Capsella grandiflora] (8)
| /---100---+
| | \----- Carubv10004566m [Capsella rubella] (91)
/-99-+ |
| | /-99-+ /---------- AT4G17230.1 [Arabidopsis thaliana] (87)
| | | | |
| | | \-100+ /----- 493153 [Arabidopsis lyrata] (93)
| | | \-100+
| | | \----- Araha.24127s0007.1.p [Arabidopsis halleri] (111)
| | |
| \------------99-----------+ /----- Csa11g032470.1 [Camelina sativa] (48)
/-99-+ | /-98-+
| | | | \----- Csa10g028250.1 [Camelina sativa] (85)
| | | /-100+
| | | | \---------- Csa12g049530.1 [Camelina sativa] (120)
| | \-65-+
/-100+ | \--------------- Bostr.30275s0178.1.p [Boechera stricta] (78)
| | |
| | \--------------------------------------------------- AA57G00005 [Aethionema arabicum] (63)
| |
--53-+ | /----- XP_010518733.1 [Tarenaya hassleriana] (71)
| \------------------------99------------------------+
| \----- XP_010530072.1 [Tarenaya hassleriana] (88)
|
\------------------------------------------------------------- evm.model.supercontig_27.254 [Carica papaya] (160)
Subtree rooted at node 216:
/----- Rsa1.0_05938.1_g00001.1 [Raphanus sativus] (7)
/-91-+
| \----- RrC7268_p1 [Raphanus raphanistrum] (79)
/-57-+
| \---------- XP_009147822.1 [Brassica rapa] (36)
|
| /----- GSBRNA2T00021149001 [Brassica napus] (27)
/-72-+---100---+
| | \----- GSBRNA2T00063354001 [Brassica napus] (112)
| |
/------------72-----------+ \--------------- XP_013592147.1 [Brassica oleracea] (127)
| |
| \-------------------- XP_009149055.1 [Brassica rapa] (76)
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| /------------------------------ Thhalv10011379m [Eutrema salsugineum] (54)
| |
| | /----- Cagra.7055s0004.1.p [Capsella grandiflora] (55)
| | /---100---+
| | | \----- Carubv10008830m [Capsella rubella] (69)
| | |
| | /-79-+ /----- Csa14g058900.1 [Camelina sativa] (61)
/-71-+ /--61-+ | | /-97-+
| | | | | | | \----- Csa03g056570.1 [Camelina sativa] (77)
| | | | /-89-+ \-97-+
| | | | | | \---------- Csa17g088340.1 [Camelina sativa] (114)
| | | | | |
| | | | | \-------------------- Bostr.26675s0117.1.p [Boechera stricta] (134)
| | | \-95-+
| | /-61-+ | /----- Araha.0626s0002.1.p [Arabidopsis halleri] (81)
| | | | | |
| | | | \--------100--------+----- 474191 [Arabidopsis lyrata] (117)
| | | | |
/-80-+ \-66-+ | \----- AT1G50600.1 [Arabidopsis thaliana] (120)
| | | |
| | | \------------------------------------ Tp1g37420 [Thellungiella parvula] (119)
| | |
| | \----------------------------------------- 676748840 [Sisymbrium irio] (135)
| |
/-97-+ | /----- RrC21_p8 [Raphanus raphanistrum] (25)
| | |---------------------100---------------------+
| | | \----- Rsa1.0_00856.1_g00007.1 [Raphanus sativus] (140)
| | |
--100+ | \--------------------------------------------------- GSBRNA2T00011759001 [Brassica napus] (41)
| |
| \-------------------------------------------------------- AA2G00159 [Aethionema arabicum] (136)
|
\------------------------------------------------------------- XP_010545481.1 [Tarenaya hassleriana] (97)
Subtree rooted at node 246:
/----- Ciclev10014845m [Citrus clementina] (2)
/-100+
| \----- orange1.1g009376m [Citrus sinensis] (86)
/-100+
| \---------- Neem_1639_f_9 [Azadirachta indica] (43)
/--------------59--------------+
| | /----- Eucgr.A01051.1.p [Eucalyptus grandis] (42)
| \---100---+
| \----- EcS761990.10 [Eucalyptus camaldulensis] (128)
|
| /------------------------- (170)
| |
| | /----- Cotton_A_04630_BGI-A2_v1.0 [Gossypium arboreum] (17)
| | /-100+
| | | \----- Gh_A05G1507 [Gossypium hirsutum] (53)
| | /-100+
| | | | /----- Gorai.009G184100.1 [Gossypium raimondii] (116)
| /-53-+ | \-100+
| | | | \----- Gh_D05G1681 [Gossypium hirsutum] (121)
| | | /-95-+
| | | | | /----- Gh_D06G2235 [Gossypium hirsutum] (47)
| | | | | /-100+
| | | | | | \----- Gorai.010G249400.1 [Gossypium raimondii] (70)
| | | | \-100+
| | \-100+ | /----- Cotton_A_04922_BGI-A2_v1.0 [Gossypium arboreum] (110)
| /--84-+ | \-100+
| | | | \----- Gh_A06G1742 [Gossypium hirsutum] (122)
| | | |
| | | \-------------------- Thecc1EG030393t1 [Theobroma cacao] (66)
| | |
| | | /----- orange1.1g008984m [Citrus sinensis] (13)
| | | /-100+
| /-100+ | | \----- Ciclev10014811m [Citrus clementina] (24)
| | | \--------100--------+
| | | \---------- Neem_3816_f_1 [Azadirachta indica] (150)
| | |
| | | /----- Eucgr.E03895.1.p [Eucalyptus grandis] (5)
| | | /-100+
| | | | \----- EcC036091.20 [Eucalyptus camaldulensis] (126)
| | \-----------100-----------+
| | \---------- Eucgr.D01435.1.p [Eucalyptus grandis] (115)
/-83-+ |
| | | /----- Cotton_A_12101_BGI-A2_v1.0 [Gossypium arboreum] (4)
| | | /-100+
| | | | \----- Gh_A04G0081 [Gossypium hirsutum] (137)
| | | /-100+
| | | | | /----- Gorai.009G446100.1 [Gossypium raimondii] (33)
| | | | \-100+
| | | | \----- Gh_D05G3644 [Gossypium hirsutum] (35)
| | | /-100+
| |-100+ | | /----- Gorai.002G096300.1 [Gossypium raimondii] (37)
| | | | | /-100+
| | | | | | \----- Gh_D01G0703 [Gossypium hirsutum] (129)
| | | | \-100+
| | | /-100+ | /----- Gh_A01G0682 [Gossypium hirsutum] (56)
| | | | | \-100+
| | | | | \----- Cotton_A_06569_BGI-A2_v1.0 [Gossypium arboreum] (118)
| | | | |
| | | /-70-+ \-------------------- Thecc1EG030733t1 [Theobroma cacao] (45)
| | | | |
| | | | | /---------- Neem_820_f_5 [Azadirachta indica] (21)
| | | | | |
| | | | \------100-----+ /----- Ciclev10007927m [Citrus clementina] (22)
| | | /--76-+ \-100+
| | | | | \----- orange1.1g046067m [Citrus sinensis] (132)
| | | | |
/-94-+ | | | | /----- (216)
| | | \-100+ \-----------75-----------+
| | | | \----- evm.model.supercontig_12.194 [Carica papaya] (133)
| | | |
| | | \------------------------------------ Eucgr.F03523.1.p [Eucalyptus grandis] (19)
| | |
| | | /------------------------- Thecc1EG002319t1 [Theobroma cacao] (18)
| | | |
| | | | /----- Cotton_A_32665_BGI-A2_v1.0 [Gossypium arboreum] (26)
| | | | /-96-+
| | | | | \----- Gh_A07G1523 [Gossypium hirsutum] (100)
| | \---------100--------+ /-99-+
| | | | \---------- Gh_D07G1671 [Gossypium hirsutum] (59)
| | | /-100+
| | | | \--------------- Gorai.001G192800.1 [Gossypium raimondii] (62)
| | | |
| | \-95-+ /----- Cotton_A_03694_BGI-A2_v1.0 [Gossypium arboreum] (38)
| | | /-100+
| | | | \----- Gh_A11G1390 [Gossypium hirsutum] (64)
| | \---100---+
| | | /----- Gh_D11G1535 [Gossypium hirsutum] (49)
| | \-100+
| | \----- Gorai.007G167000.1 [Gossypium raimondii] (75)
| |
| \--------------------------------------------------- evm.model.supercontig_136.17 [Carica papaya] (67)
/-100+
| | /----- Cagra.1158s0007.1.p [Capsella grandiflora] (14)
| | /-100+
| | | \----- Carubv10015685m [Capsella rubella] (32)
| | /-100+
| | | | /----- Csa15g057060.1 [Camelina sativa] (40)
| | | \-100+
| | /-53-+ \----- Csa19g040130.1 [Camelina sativa] (138)
| | | |
| | | \--------------- Bostr.19424s0023.1.p [Boechera stricta] (74)
| | /-100+
| | | | /---------- AT2G04890.1 [Arabidopsis thaliana] (57)
| | | | |
| | | \---100---+ /----- 899299 [Arabidopsis lyrata] (98)
| | /-97-+ \-100+
| | | | \----- Araha.10347s0004.1.p [Arabidopsis halleri] (123)
--100+ | | |
| | | \------------------------- Thhalv10002541m [Eutrema salsugineum] (92)
| | |
| | | /--------------- 676741272 [Sisymbrium irio] (28)
| | | |
| | /--96-+ | /----- GSBRNA2T00110850001 [Brassica napus] (50)
| | | |------58------+ /-100+
| | | | | | \----- XP_013599360.1 [Brassica oleracea] (65)
| | | | \-100+
| \--------100--------+ | \---------- XP_009102740.1 [Brassica rapa] (125)
| | |
| | \------------------------------ Tp3g23490 [Thellungiella parvula] (113)
| |
| \------------------------------------ KFK23426.1 [Arabis alpina] (82)
|
| /----- XP_010547219.1 [Tarenaya hassleriana] (46)
\--------------------------100--------------------------+
\----- XP_010557767.1 [Tarenaya hassleriana] (110)
Root part of tree:
/------------------------------------------------------------------ GSBRNA2T00011921001 [Brassica napus] (1)
|
|------------------------------------------------------------------ XP_009129708.1 [Brassica rapa] (130)
|
| /----- (246)
| /---------100---------+
| | \----- AA46G00013 [Aethionema arabicum] (6)
| |
| | /----- Carubv10026289m [Capsella rubella] (10)
| | /-100-+
| | | \----- Cagra.2766s0005.1.p [Capsella grandiflora] (68)
| | /-100+
| /-100-+ | | /----- Csa11g074290.1 [Camelina sativa] (30)
| | | | \-100-+
| | | /-100-+ \----- Csa18g014220.1 [Camelina sativa] (83)
| | | | |
| | | | \---------------- Bostr.5224s0004.1.p [Boechera stricta] (99)
| | | |
| /-100+ \-100+ /----- 917700 [Arabidopsis lyrata] (20)
| | | | /-100-+
| | | | | \----- Araha.6352s0003.1.p [Arabidopsis halleri] (141)
| | | \----89----+
| | | \----------- AT5G48150.1 [Arabidopsis thaliana] (60)
| | |
| | \--------------------------------- Thhalv10004051m [Eutrema salsugineum] (94)
| /-100-+
+ | | /----- XP_013612889.1 [Brassica oleracea] (16)
| | | /-100-+
| | | | \----- GSBRNA2T00109567001 [Brassica napus] (131)
| | | /-100+
| | | | | /----- GSBRNA2T00009781001 [Brassica napus] (95)
| | | | \-100-+
| | \---------100---------+ \----- XP_009111821.1 [Brassica rapa] (96)
| | |
| | | /----- Rsa1.0_00323.1_g00019.1 [Raphanus sativus] (29)
| | \----100---+
| /-100+ \----- RrC177_p9 [Raphanus raphanistrum] (51)
| | |
| | | /----- GSBRNA2T00144444001 [Brassica napus] (31)
| | | /-100-+
| | | | \----- XP_009151613.1 [Brassica rapa] (34)
| | | /-97-+
| | | | | /----- XP_013593626.1 [Brassica oleracea] (58)
| /-100-+ | | \-100-+
| | | | /-100-+ \----- GSBRNA2T00014243001 [Brassica napus] (140)
| | | | | |
| | | \----------53---------+ \---------------- RrC562_p6 [Raphanus raphanistrum] (130)
| | | |
| /-100+ | \---------------------- 676782258 [Sisymbrium irio] (170)
| | | |
| | | \------------------------------------------------- Tp2g18550 [Thellungiella parvula] (73)
| | |
\-100-+ \------------------------------------------------------- Rsa1.0_02123.1_g00006.1 [Raphanus sativus] (52)
|
| /----- XP_013621066.1 [Brassica oleracea] (12)
\--------------------------100-------------------------+
\----- GSBRNA2T00120716001 [Brassica napus] (90)
|
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