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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM667
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 179:
/----- GSBRNA2T00102027001 [Brassica napus] (17)
/-100+
| \----- XP_009105416.1 [Brassica rapa] (25)
/-88-+
| \---------- XP_013590283.1 [Brassica oleracea] (88)
/-100+
| \--------------- GSBRNA2T00066295001 [Brassica napus] (20)
/-100+
| | /----- Rsa1.0_01947.1_g00008.1 [Raphanus sativus] (18)
| \------100-----+
/-100+ \----- RrC763_p8 [Raphanus raphanistrum] (59)
| |
/-100-+ \------------------------- 676733132 [Sisymbrium irio] (111)
| |
/-100+ \------------------------------ Tp5g23740 [Thellungiella parvula] (73)
| |
| \------------------------------------ Thhalv10018547m [Eutrema salsugineum] (131)
|
| /----- Csa05g085100.1 [Camelina sativa] (51)
| /-100+
| | \----- Csa07g034330.1 [Camelina sativa] (150)
| /-100+
/-76-+ | \---------- Csa16g028670.1 [Camelina sativa] (160)
| | /-78-+
| | | | /----- Cagra.3364s0020.1.p [Capsella grandiflora] (115)
| | | \---100---+
| | /-76-+ \----- Carubv10021345m [Capsella rubella] (130)
| | | |
| | | \-------------------- Bostr.26959s0025.1.p [Boechera stricta] (86)
/-100+ \-------76------+
| | | /---------- AT1G68640.1 [Arabidopsis thaliana] (56)
| | | |
| | \------99------+ /----- Araha.2280s0002.1.p [Arabidopsis halleri] (77)
| | \-99-+
/-100+ | \----- 475990 [Arabidopsis lyrata] (130)
| | |
| | \---------------------------------------------- KFK41287.1 [Arabis alpina] (92)
| |
/-100+ \--------------------------------------------------- AA797G00002 [Aethionema arabicum] (82)
| |
| | /----- XP_010532205.1 [Tarenaya hassleriana] (31)
| \------------------------100-----------------------+
| \----- XP_010551286.1 [Tarenaya hassleriana] (170)
|
| /----- orange1.1g018357m [Citrus sinensis] (19)
| /-----------100----------+
| | \----- Ciclev10031441m [Citrus clementina] (87)
| |
--100+ | /----- Gh_D13G0732 [Gossypium hirsutum] (30)
| | /-99-+
| | | \----- Gorai.013G081100.1 [Gossypium raimondii] (41)
| | /-100+
| | | | /----- Gh_A13G2141 [Gossypium hirsutum] (69)
| | | \-90-+
| | | \----- Cotton_A_23249_BGI-A2_v1.0 [Gossypium arboreum] (126)
| | /-100+
| | | | /----- Cotton_A_28674_BGI-A2_v1.0 [Gossypium arboreum] (49)
\--------------55--------------+ | | /-57-+
| | | | \----- Gh_A12G1545 [Gossypium hirsutum] (67)
| | \-100+
| /-100+ | /----- Gh_D12G1679 [Gossypium hirsutum] (54)
| | | \-100+
| | | \----- Gorai.008G185000.1 [Gossypium raimondii] (129)
|-55-+ |
| | \-------------------- Thecc1EG011845t1 [Theobroma cacao] (90)
| |
| \------------------------- Eucgr.G02341.1.p [Eucalyptus grandis] (48)
|
\------------------------------ evm.model.supercontig_1.202 [Carica papaya] (52)
Root part of tree:
/------------------------------------------------------------------ XP_010557921.1 [Tarenaya hassleriana] (1)
|
|------------------------------------------------------------------ XP_010534328.1 [Tarenaya hassleriana] (110)
|
| /----- Gh_A11G2749 [Gossypium hirsutum] (2)
| /--98-+
| | \----- Cotton_A_14315_BGI-A2_v1.0 [Gossypium arboreum] (44)
| /-100+
| | | /----- Gh_D11G3337 [Gossypium hirsutum] (28)
| | \--97-+
| | \----- Gorai.007G352600.1 [Gossypium raimondii] (116)
| /-100-+
| | | /----------- Gh_D13G0017 [Gossypium hirsutum] (38)
| | | |
| | | | /----- Gh_A13G0002 [Gossypium hirsutum] (40)
| | \-100+--96-+
| /-100+ | \----- Cotton_A_20542_BGI-A2_v1.0 [Gossypium arboreum] (91)
| | | |
| | | \----------- Gorai.013G001700.1 [Gossypium raimondii] (99)
| | |
| /--88-+ | /----- Thecc1EG023491t3 [Theobroma cacao] (42)
| | | \-------95-------+
| | | \----- Thecc1EG023492t1 [Theobroma cacao] (113)
| | |
| /-84-+ \--------------------------- evm.model.supercontig_5.165 [Carica papaya] (98)
| | |
| | | /----------- Neem_24660_f_1 [Azadirachta indica] (15)
| | | |
| | \---------100---------+ /----- Ciclev10005077m [Citrus clementina] (180)
| /-100-+ \-100-+
| | | \----- orange1.1g015258m [Citrus sinensis] (119)
| | |
| | | /----- Eucgr.A02240.1.p [Eucalyptus grandis] (39)
| /-72-+ \---------------100--------------+
| | | \----- EcC049400.20 [Eucalyptus camaldulensis] (80)
| | |
| | \-------------------------------------------- (179)
| |
| | /----- orange1.1g045786m [Citrus sinensis] (4)
| | /-100-+
| | | \----- Ciclev10001081m [Citrus clementina] (6)
| |-----------------100-----------------+
| | | /----- Neem_11963_f_2 [Azadirachta indica] (21)
| | \--97-+
| | \----- Neem_25373_f_2 [Azadirachta indica] (34)
| |
| | /----- Gorai.013G004400.1 [Gossypium raimondii] (7)
| | /-100-+
| | | \----- Gh_D13G0042 [Gossypium hirsutum] (22)
|-------100------+ |
| | /-100+----------- Gh_A13G0027 [Gossypium hirsutum] (32)
| | | |
| | | \----------- Cotton_A_20511_BGI-A2_v1.0 [Gossypium arboreum] (133)
| | |
| |---------------100--------------+ /----------- Gh_D10G1937 [Gossypium hirsutum] (45)
| | | |
| | | |----------- Gorai.011G217200.1 [Gossypium raimondii] (47)
| | \-100+
| | | /----- Cotton_A_24486_BGI-A2_v1.0 [Gossypium arboreum] (65)
| | \-100-+
| | \----- Gh_A10G1678 [Gossypium hirsutum] (122)
| |
| |------------------------------------------------- evm.model.supercontig_847.1 [Carica papaya] (63)
| |
| \------------------------------------------------- Eucgr.G03217.1.p [Eucalyptus grandis] (112)
|
| /----- 487514 [Arabidopsis lyrata] (3)
| /-100-+
| | \----- Araha.13651s0005.1.p [Arabidopsis halleri] (124)
| /-96-+
| | \----------- AT5G06960.1 [Arabidopsis thaliana] (33)
| /--97-+
| | \---------------- Bostr.13129s0278.1.p [Boechera stricta] (12)
| |
| /----100---+ /----- Cagra.16209s0003.1.p [Capsella grandiflora] (10)
| | | /-100-+
| | | | \----- Carubv10001413m [Capsella rubella] (29)
| | \----51----+
| | | /----- Csa20g009310.1 [Camelina sativa] (14)
| | \--75-+
| | \----- Csa08g057500.1 [Camelina sativa] (128)
+ |
| | /----- RrC4217_p2 [Raphanus raphanistrum] (24)
| | /--63-+
| | | \----- Rsa1.0_00625.1_g00009.1 [Raphanus sativus] (94)
| /---------100---------+ |
| | | /-100+ /----- XP_013616314.1 [Brassica oleracea] (55)
| | | | | |
| | | | | |----- GSBRNA2T00119746001 [Brassica napus] (83)
| | | | \-100-+
| | | /-100-+ |----- XP_009125669.1 [Brassica rapa] (96)
| | | | | |
| | | | | \----- GSBRNA2T00078593001 [Brassica napus] (120)
| | | /-100+ |
| | | | | \---------------- 676732640 [Sisymbrium irio] (78)
| | | | |
| | \-100-+ \---------------------- Tp6g35910 [Thellungiella parvula] (120)
| | |
| | \--------------------------- Thhalv10015975m [Eutrema salsugineum] (121)
| |
| | /----- Csa19g016500.1 [Camelina sativa] (5)
| | /-100-+
| | | \----- Csa15g016140.1 [Camelina sativa] (16)
| | /-100+
| | | \----------- Csa01g013360.1 [Camelina sativa] (53)
| | /---------100---------+
| | | | /----- Cagra.0430s0055.1.p [Capsella grandiflora] (76)
| | | \----89----+
| | | \----- Carubv10015943m [Capsella rubella] (190)
| | |
| | | /----------- GSBRNA2T00096992001 [Brassica napus] (9)
| | | |
| | | | /----- XP_013611544.1 [Brassica oleracea] (11)
| | | /-100+-100-+
| | | | | \----- GSBRNA2T00007398001 [Brassica napus] (68)
| | | | |
| | | /-------100------+ \----------- XP_009120759.1 [Brassica rapa] (62)
| | | | |
| | | | \---------------- Rsa1.0_00025.1_g00005.1 [Raphanus sativus] (27)
| | | |
| | | | /----- GSBRNA2T00074319001 [Brassica napus] (13)
| | | | /-100-+
| | | | | \----- XP_013586407.1 [Brassica oleracea] (37)
| | | | /-59-+
| | | | | | /----- XP_009146627.1 [Brassica rapa] (43)
| /-88-+ | | | \-100-+
| | | | | /--53-+ \----- GSBRNA2T00000204001 [Brassica napus] (110)
| | | | | | |
| | | | | | \---------------- 676724618 [Sisymbrium irio] (117)
| | | | | /-81-+
| | | | | | | /----- Rsa1.0_02505.1_g00009.1 [Raphanus sativus] (89)
| | | /--88-+ | | \-------96-------+
| | | | |-54-+ | \----- RrC4565_p6 [Raphanus raphanistrum] (114)
| | | | | | |
| | | | | | | /----- GSBRNA2T00110643001 [Brassica napus] (61)
| | | | | | | /-100-+
| | | | | | | | \----- XP_013628367.1 [Brassica oleracea] (140)
| | | | | | | /-100+
| | | | | |--53-+ | | /----- XP_009135220.1 [Brassica rapa] (81)
| | | | | | | | \-100-+
| | | | | | |----100---+ \----- GSBRNA2T00111529001 [Brassica napus] (97)
| | | | | | | |
| | | | | | | | /----- RrC1067_p9 [Raphanus raphanistrum] (72)
| | | | | | | \----100---+
| | | | | | | \----- Rsa1.0_00179.1_g00020.1 [Raphanus sativus] (93)
| | | /-100+ | | |
| | | | | | | \--------------------------- Tp3g10470 [Thellungiella parvula] (118)
| | | | | | |
| | | | | | \--------------------------------- Thhalv10021187m [Eutrema salsugineum] (57)
| | | | | |
| | | | | |-------------------------------------- AT3G12250.4 [Arabidopsis thaliana] (35)
| | | | | |
| | | | | |-------------------------------------- Bostr.3640s0002.1.p [Boechera stricta] (36)
| | | | | |
| | | | | |-------------------------------------- 478587 [Arabidopsis lyrata] (71)
| | | | | |
| | | | | \-------------------------------------- Araha.1578s0022.1.p [Arabidopsis halleri] (125)
| | | | |
| | | | \-------------------------------------------- AA168G00010 [Aethionema arabicum] (85)
| | | |
| | | | /----------- Csa08g057510.1 [Camelina sativa] (8)
\--67-+ | | |
| | | | /----- Carubv10001409m [Capsella rubella] (26)
| | | |-100-+
| \-100-+ /-85-+ \----- Cagra.16209s0004.1.p [Capsella grandiflora] (100)
| | | |
| | | |----------- Csa20g009280.1 [Camelina sativa] (50)
| | /--99-+ |
| | | | \----------- Csa13g008990.1 [Camelina sativa] (127)
| | | |
| | | \---------------- Bostr.13129s0279.1.p [Boechera stricta] (23)
| | /---------100---------+
| | | | /----- Araha.13651s0004.1.p [Arabidopsis halleri] (70)
| | | | /-100-+
| | | | | \----- 487510 [Arabidopsis lyrata] (79)
| | | \----100---+
| | | \----------- AT5G06950.1 [Arabidopsis thaliana] (75)
| | |
| | | /----- XP_009122312.1 [Brassica rapa] (46)
| | | /-100-+
| | | | \----- GSBRNA2T00136153001 [Brassica napus] (132)
| | | /-100+
| \-100+ | | /----- XP_013606547.1 [Brassica oleracea] (58)
| | | \-100-+
| | /--67-+ \----- GSBRNA2T00107087001 [Brassica napus] (84)
| | | |
| | /-100+ \---------------- RrC951_p3 [Raphanus raphanistrum] (95)
| | | |
| | /-100-+ \---------------------- Rsa1.0_00816.1_g00006.1 [Raphanus sativus] (60)
| | | |
| | /-98-+ \--------------------------- 676732454 [Sisymbrium irio] (74)
| | | |
| \--82-+ \--------------------------------- Tp6g35920 [Thellungiella parvula] (64)
| |
| \-------------------------------------- Thhalv10014082m [Eutrema salsugineum] (123)
|
\------------------------------------------------------------ XP_010520066.1 [Tarenaya hassleriana] (66)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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