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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM778
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 219:
/---------- GSBRNA2T00057875001 [Brassica napus] (2)
|
/-91-+ /----- XP_013590906.1 [Brassica oleracea] (6)
| \-83-+
| \----- GSBRNA2T00028935001 [Brassica napus] (8)
/-100+
| | /----- XP_009104354.1 [Brassica rapa] (11)
| \----97---+
/-100+ \----- GSBRNA2T00099070001 [Brassica napus] (50)
| |
| | /----- RrC22061_p1 [Raphanus raphanistrum] (16)
| \------100-----+
| \----- Rsa1.0_02153.1_g00007.1 [Raphanus sativus] (118)
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/-89-+ /----- 676749200 [Sisymbrium irio] (4)
| | /------100-----+
| | | \----- 676749202 [Sisymbrium irio] (56)
| | |
| | | /----- GSBRNA2T00127050001 [Brassica napus] (9)
| | | /-100+
| \-95-+ | \----- XP_013603484.1 [Brassica oleracea] (18)
/--86-+ | |
| | | /-100+---------- GSBRNA2T00049441001 [Brassica napus] (66)
| | | | |
| | \-100+ \---------- XP_009116860.1 [Brassica rapa] (96)
| | |
| | \--------------- RrC184_p2 [Raphanus raphanistrum] (52)
| |
| \------------------------------ Tp5g01440 [Thellungiella parvula] (58)
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/-90-+ /----- 907751 [Arabidopsis lyrata] (24)
| | /-100+
| | | \----- Araha.46415s0001.1.p [Arabidopsis halleri] (51)
| | /---100---+
| | | \---------- AT3G61910.1 [Arabidopsis thaliana] (25)
| | |
| | | /----- Carubv10019223m [Capsella rubella] (26)
| | | /-100+
| \-------98------+ | \----- Cagra.0483s0052.1.p [Capsella grandiflora] (89)
/-90-+ | |
| | | /-100+ /----- Csa05g094110.1 [Camelina sativa] (44)
| | | | | |
| | | | \-100+----- Csa07g002690.1 [Camelina sativa] (130)
| | \-100+ |
| | | \----- Csa16g002750.1 [Camelina sativa] (170)
/-100+ | |
| | | \--------------- Bostr.13158s0196.1.p [Boechera stricta] (91)
| | |
| | \----------------------------------------- KFK35377.1 [Arabis alpina] (87)
| |
/-82-+ \---------------------------------------------- AA61G00547 [Aethionema arabicum] (43)
| |
| | /----- XP_010525243.1 [Tarenaya hassleriana] (3)
| | /-99-+
| | | \----- XP_010544875.1 [Tarenaya hassleriana] (117)
| \-------------------90-------------------+
| \---------- XP_010559145.1 [Tarenaya hassleriana] (86)
|
| /----- GSBRNA2T00038201001 [Brassica napus] (5)
| /-100+
| | \----- XP_013634628.1 [Brassica oleracea] (115)
| /-57-+
| | \---------- XP_009142445.1 [Brassica rapa] (100)
| |
| /-100+ /----- Rsa1.0_00244.1_g00019.1 [Raphanus sativus] (20)
| | | /-100+
| | | | \----- RrC12779_p1 [Raphanus raphanistrum] (59)
| /-99-+ \-55-+
| | | \---------- GSBRNA2T00034316001 [Brassica napus] (60)
| | |
| | \-------------------- Tp4g28800 [Thellungiella parvula] (92)
| |
| | /----- GSBRNA2T00073188001 [Brassica napus] (7)
| | /-100+
| /-100+ | \----- XP_013634739.1 [Brassica oleracea] (113)
/-100+ | | /-68-+
| | | | | | /----- RrC4156_p1 [Raphanus raphanistrum] (68)
| | | | | \-100+
| | | | /-100+ \----- Rsa1.0_02595.1_g00003.1 [Raphanus sativus] (90)
| | | | | |
| | /--63-+ | | | /----- XP_009142607.1 [Brassica rapa] (12)
| | | | \-100+ \---100---+
| | | | | \----- GSBRNA2T00132929001 [Brassica napus] (28)
| | | | |
| | | | \-------------------- 676734780 [Sisymbrium irio] (110)
| | | |
| | | \------------------------------ Thhalv10001506m [Eutrema salsugineum] (33)
| | |
| | | /----- Araha.8989s0001.1.p [Arabidopsis halleri] (27)
| | | |
| | /-100+ /---------73--------+----- 904148 [Arabidopsis lyrata] (62)
| | | | | |
| | | | | \----- AT2G46770.1 [Arabidopsis thaliana] (76)
| | | | |
| | | | /-98-+ /----- Carubv10023503m [Capsella rubella] (63)
| | | | | | /------100-----+
| | | | | | | \----- Cagra.0050s0024.1.p [Capsella grandiflora] (123)
| | | | | | |
| | | | | \-96-+ /--------------- Bostr.25993s0090.1.p [Boechera stricta] (78)
| \------93------+ | | | |
| | \--50-+ | | /----- Csa04g065900.1 [Camelina sativa] (97)
| | | \-95-+ /-51-+
| | | | | \----- Csa05g002390.1 [Camelina sativa] (120)
| | | \-100+
| | | \---------- Csa06g053280.1 [Camelina sativa] (111)
| | |
| | \------------------------------ KFK37442.1 [Arabis alpina] (40)
| |
| \----------------------------------------- AA21G00405 [Aethionema arabicum] (38)
|
| /----- GSBRNA2T00111390001 [Brassica napus] (10)
| /-100+
| | \----- XP_013584744.1 [Brassica oleracea] (72)
| /-100+
| | | /----- XP_009114859.1 [Brassica rapa] (13)
| | \-100+
| /-100+ \----- GSBRNA2T00156597001 [Brassica napus] (83)
| | |
| | | /----- Rsa1.0_00808.1_g00003.1 [Raphanus sativus] (85)
| /-100+ \---100---+
| | | \----- RrC2769_p1 [Raphanus raphanistrum] (98)
| | |
| | \-------------------- 676737560 [Sisymbrium irio] (42)
| |
--87-+ | /----- Rsa1.0_00043.1_g00018.1 [Raphanus sativus] (32)
| | /---100---+
| | | \----- RrC8893_p1 [Raphanus raphanistrum] (39)
| /-95-+ |
| | |---100---+ /---------- GSBRNA2T00106315001 [Brassica napus] (35)
| | | | |
| | | \-100+ /----- XP_009151451.1 [Brassica rapa] (49)
| | | \-95-+
| /--67-+ | \----- GSBRNA2T00036630001 [Brassica napus] (82)
| | | |
| | | \------------------------- Tp1g28190 [Thellungiella parvula] (41)
| | |
| | | /----- KFK45026.1 [Arabis alpina] (19)
| | \-----------88-----------+
| | \----- Thhalv10009336m [Eutrema salsugineum] (79)
| |
| /-88-+------------------------------------ Bostr.3359s0081.1.p [Boechera stricta] (14)
| | |
| | | /---------- AT1G32770.1 [Arabidopsis thaliana] (45)
| | | |
| | | /----72---+ /----- 313839 [Arabidopsis lyrata] (57)
| | | | \-89-+
| | | | \----- Araha.40634s0001.1.p [Arabidopsis halleri] (119)
| | | |
| | \-------75------+ /----- Cagra.14513s0001.1.p [Capsella grandiflora] (53)
| /-100+ | /---100---+
| | | | | \----- Carubv10011900m [Capsella rubella] (114)
| | | | |
| | | \-100+ /----- Csa14g042710.1 [Camelina sativa] (88)
| | | | /-100+
| | | | | \----- Csa03g037070.1 [Camelina sativa] (160)
| /-100+ | \-100+
| | | | \---------- Csa17g054170.1 [Camelina sativa] (180)
| | | |
| | | \----------------------------------------- AA54G00226 [Aethionema arabicum] (99)
| | |
| | | /----- XP_010541977.1 [Tarenaya hassleriana] (36)
| | \-------------------100------------------+
| | \----- XP_010538860.1 [Tarenaya hassleriana] (67)
| |
| | /----- Gh_D03G0775 [Gossypium hirsutum] (15)
| | /-100+
| | | \----- Gorai.003G077700.1 [Gossypium raimondii] (77)
| | /------100-----+
| | | | /----- Cotton_A_31522_BGI-A2_v1.0 [Gossypium arboreum] (17)
| | | \-85-+
| | | \----- Gh_A02G0977 [Gossypium hirsutum] (84)
| | |
| | | /----- Gorai.008G259700.1 [Gossypium raimondii] (22)
\----95---+ | /-99-+
| | | \----- Gh_D12G2359 [Gossypium hirsutum] (95)
| |------100-----+
| | | /----- Cotton_A_13198_BGI-A2_v1.0 [Gossypium arboreum] (48)
| | \-100+
| | \----- Gh_A12G2179 [Gossypium hirsutum] (120)
| |
| | /----- Cotton_A_08128_BGI-A2_v1.0 [Gossypium arboreum] (31)
| | /-100+
| | | \----- Gh_A09G2371 [Gossypium hirsutum] (140)
| | /-100+
| | | | /----- Gh_D09G1785 [Gossypium hirsutum] (65)
| | | \-100+
| | | \----- Gorai.006G205300.1 [Gossypium raimondii] (80)
| | /-52-+
| | | | /---------- Gorai.004G129200.1 [Gossypium raimondii] (47)
| | | | |
\------------93-----------+ | | | /----- Gh_A08G0961 [Gossypium hirsutum] (55)
| | \-100+-100+
|-51-+ | \----- Cotton_A_39966_BGI-A2_v1.0 [Gossypium arboreum] (81)
| | |
| | \---------- Gh_D08G1172 [Gossypium hirsutum] (75)
| |
| \-------------------- Thecc1EG015621t1 [Theobroma cacao] (74)
|
| /----- Ciclev10021141m [Citrus clementina] (34)
| /-100+
| | \----- orange1.1g014260m [Citrus sinensis] (116)
|------100-----+
| | /----- Neem_12571_f_1 [Azadirachta indica] (46)
| \-100+
| \----- Neem_10484_f_1 [Azadirachta indica] (112)
|
| /---------- Eucgr.D01671.1.p [Eucalyptus grandis] (37)
| |
|------93------+ /----- EcC054635.10 [Eucalyptus camaldulensis] (61)
| \-100+
| \----- Eucgr.E01053.1.p [Eucalyptus grandis] (93)
|
\------------------------- evm.model.supercontig_37.89 [Carica papaya] (190)
Root part of tree:
/------------------------------------------------------------------ Ciclev10024035m [Citrus clementina] (1)
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|------------------------------------------------------------------ orange1.1g015853m [Citrus sinensis] (73)
|
| /------------------------------------------------- (219)
| |
| | /---------------- Gh_D11G1062 [Gossypium hirsutum] (21)
| | |
| | | /-------- Gh_A11G0915 [Gossypium hirsutum] (94)
| | /-----------100----------+--100--+
| | | | \-------- Cotton_A_15646_BGI-A2_v1.0 [Gossypium arboreum] (121)
+ /---91---+ | |
| | | | \---------------- Gorai.007G112500.1 [Gossypium raimondii] (122)
| | | |
| | | | /---------------- Gh_A12G1049 [Gossypium hirsutum] (23)
| | | | |
| | | | | /-------- Gh_D12G1169 [Gossypium hirsutum] (54)
| | | | /---100--+--100--+
| | \---97--+ | | \-------- Gorai.008G130300.1 [Gossypium raimondii] (64)
| | | | |
| | | | \---------------- Cotton_A_26426_BGI-A2_v1.0 [Gossypium arboreum] (70)
| | | /---87--+
\--100--+ | | | /-------- Gh_D07G1330 [Gossypium hirsutum] (29)
| | | | /--100--+
| | | | | \-------- Gorai.001G150800.1 [Gossypium raimondii] (110)
| | | \---100--+
| \---80--+ | /-------- Cotton_A_36063_BGI-A2_v1.0 [Gossypium arboreum] (30)
| | \--100--+
| | \-------- Gh_A07G1226 [Gossypium hirsutum] (124)
| |
| \--------------------------------- Thecc1EG005047t1 [Theobroma cacao] (69)
|
| /-------- Neem_14495_f_1 [Azadirachta indica] (71)
\------------------------96-----------------------+
\-------- Neem_32940_f_1 [Azadirachta indica] (150)
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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