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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM792
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 143:
/------------------------- Thhalv10004769m [Eutrema salsugineum] (9)
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| /----- XP_009136412.1 [Brassica rapa] (11)
| /-100+
| | \----- GSBRNA2T00113594001 [Brassica napus] (31)
| /-72-+
| | | /----- XP_013594261.1 [Brassica oleracea] (50)
| | \-100+
| /-100+ \----- GSBRNA2T00025013001 [Brassica napus] (59)
| | |
| | | /----- Rsa1.0_08346.1_g00001.1 [Raphanus sativus] (56)
/-71-+ | \---100---+
| | | \----- RrC13077_p1 [Raphanus raphanistrum] (72)
| |-78-+
| | | /----- XP_013618485.1 [Brassica oleracea] (17)
| | | /-100+
| | | | \----- GSBRNA2T00086507001 [Brassica napus] (47)
| | \----88---+
| | | /----- XP_009130138.1 [Brassica rapa] (29)
| | \-91-+
| | \----- GSBRNA2T00075532001 [Brassica napus] (36)
| |
| \------------------------- 676729432 [Sisymbrium irio] (16)
/--77-+
| | /----- XP_009111964.1 [Brassica rapa] (10)
| | /-100+
| | | \----- GSBRNA2T00094717001 [Brassica napus] (96)
| | /-51-+
| | | \---------- XP_013607377.1 [Brassica oleracea] (27)
| | /-97-+
| | | \--------------- Rsa1.0_00056.1_g00035.1 [Raphanus sativus] (190)
| |----80---+
/-55-+ | \-------------------- Rsa1.0_00718.1_g00008.1 [Raphanus sativus] (99)
| | |
| | \------------------------------ Tp2g24220 [Thellungiella parvula] (26)
| |
| |------------------------------------ 919330 [Arabidopsis lyrata] (33)
/-54-+ |
| | |------------------------------------ Araha.15705s0002.1.p [Arabidopsis halleri] (64)
| | |
| | \------------------------------------ AT5G60910.1 [Arabidopsis thaliana] (120)
| |
/-53-+ \----------------------------------------- Bostr.26833s0146.1.p [Boechera stricta] (28)
| |
| | /----- Csa18g034280.1 [Camelina sativa] (20)
| | |
/-53-+ \-------------------95-------------------+----- Csa02g067860.1 [Camelina sativa] (82)
| | |
| | \----- Csa11g094760.1 [Camelina sativa] (98)
/-80-+ |
| | \--------------------------------------------------- Carubv10027017m [Capsella rubella] (97)
| |
--100+ \-------------------------------------------------------- KFK27856.1 [Arabis alpina] (80)
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| /----- XP_010547743.1 [Tarenaya hassleriana] (46)
\---------------------------96--------------------------+
\----- XP_010522467.1 [Tarenaya hassleriana] (90)
Subtree rooted at node 196:
/----- Rsa1.0_01143.1_g00007.1 [Raphanus sativus] (4)
/----97---+
| \----- RrC426_p8 [Raphanus raphanistrum] (84)
|
/-100+ /----- GSBRNA2T00056989001 [Brassica napus] (25)
| | /-100+
| | | \----- XP_013613940.1 [Brassica oleracea] (93)
| \-100+
| | /----- GSBRNA2T00059911001 [Brassica napus] (40)
/-51-+ \-91-+
| | \----- XP_009109914.1 [Brassica rapa] (85)
| |
| |-------------------- 676715506 [Sisymbrium irio] (78)
/-100+ |
| | \-------------------- Tp1g22380 [Thellungiella parvula] (83)
| |
/--97-+ \------------------------- Thhalv10008576m [Eutrema salsugineum] (22)
| |
| \------------------------------ KFK28995.1 [Arabis alpina] (42)
|
| /----- Araha.14511s0002.1.p [Arabidopsis halleri] (12)
| /-100+
| | \----- 890115 [Arabidopsis lyrata] (14)
| /---100---+
/-100+ | \---------- AT1G26310.1 [Arabidopsis thaliana] (71)
| | |
| | | /----- Carubv10011954m [Capsella rubella] (21)
| | /-99-+ /---100---+
| | | | | \----- Cagra.6677s0007.1.p [Capsella grandiflora] (44)
| | | | |
| | | \-100+ /---------- Csa03g029230.1 [Camelina sativa] (100)
/-100+ | | | |
| | \----97----+ \-100+ /----- Csa14g032470.1 [Camelina sativa] (160)
| | | \-100+
| | | \----- Csa17g034610.1 [Camelina sativa] (170)
| | |
| | \------------------------- Bostr.12659s0367.1.p [Boechera stricta] (48)
| |
| \----------------------------------------- AA39G00657 [Aethionema arabicum] (39)
|
| /---------- RrC6092_p1 [Raphanus raphanistrum] (5)
| |
| | /----- GSBRNA2T00124318001 [Brassica napus] (66)
| |-100+
| /---100---+ \----- XP_009105010.1 [Brassica rapa] (76)
| | |
| | | /----- XP_013589842.1 [Brassica oleracea] (140)
| | \-99-+
| | \----- GSBRNA2T00118005001 [Brassica napus] (110)
| |
| |-------------------- Tp5g24190 [Thellungiella parvula] (18)
| |
| | /----- GSBRNA2T00054833001 [Brassica napus] (19)
| | /---100---+
| /-82-+ | \----- XP_013590290.1 [Brassica oleracea] (91)
| | | |
| | |-100+ /----- XP_009105460.1 [Brassica rapa] (34)
/-100+ | | | /-100+
| | | | | | \----- GSBRNA2T00101980001 [Brassica napus] (49)
| | | | \-95-+
| | | | | /----- Rsa1.0_00012.1_g00035.1 [Raphanus sativus] (65)
| | | | \-100+
| | | | \----- RrC5342_p1 [Raphanus raphanistrum] (130)
| | /-93-+ |
| | | | \-------------------- 676764386 [Sisymbrium irio] (60)
| | | |
| | | | /---------- RrC12193_p1 [Raphanus raphanistrum] (37)
| | | | |
| | | |------86------+ /----- GSBRNA2T00048277001 [Brassica napus] (75)
| | | | \-100+
| | | | \----- XP_009127703.1 [Brassica rapa] (110)
| | /--59-+ |
| | | | \------------------------- Thhalv10019025m [Eutrema salsugineum] (92)
| | | |
| | | | /----- Carubv10022005m [Capsella rubella] (69)
| | | |-----------100----------+
| | | | \----- Cagra.1157s0032.1.p [Capsella grandiflora] (88)
/-100+ | | |
| | | | \------------------------------ KFK41337.1 [Arabis alpina] (86)
| | | |
| | | | /----- 476039 [Arabidopsis lyrata] (23)
| | | | /-99-+
| | | | | \----- Araha.12744s0001.1.p [Arabidopsis halleri] (35)
| | \---100---+-----------100-----------+
| | | \---------- AT1G69120.1 [Arabidopsis thaliana] (54)
| | |
| | |------------------------------------ Bostr.10273s0459.1.p [Boechera stricta] (38)
| | |
| | |------------------------------------ Csa16g030440.1 [Camelina sativa] (73)
| | |
| | |------------------------------------ Csa05g085820.1 [Camelina sativa] (79)
| | |
| | |------------------------------------ AA73G00017 [Aethionema arabicum] (81)
| | |
| | \------------------------------------ Csa07g035800.1 [Camelina sativa] (95)
| |
| | /----- XP_010551359.1 [Tarenaya hassleriana] (43)
| \---------------------100---------------------+
| \----- XP_010552551.1 [Tarenaya hassleriana] (89)
|
| /---------- Cotton_A_35903_BGI-A2_v1.0 [Gossypium arboreum] (7)
/-52-+ |
| | /---100---+ /----- Gh_D02G1311 [Gossypium hirsutum] (41)
| | | \-80-+
| | | \----- Gorai.005G147200.1 [Gossypium raimondii] (68)
| | |
| | | /----- Gh_D04G1891 [Gossypium hirsutum] (8)
| | /-78-+ /-100+
| | | | | \----- Gh_A04G1264 [Gossypium hirsutum] (51)
| | | | /-98-+
| | | | | \---------- Gorai.012G185500.1 [Gossypium raimondii] (70)
| | /-94-+ \-100+
| | | | \--------------- Cotton_A_11745_BGI-A2_v1.0 [Gossypium arboreum] (180)
| | | |
--100+ | | \------------------------- Thecc1EG011475t1 [Theobroma cacao] (63)
| |------------99-----------+
| | | /--------------- Gh_D13G0878 [Gossypium hirsutum] (13)
| | | |
| | | | /----- Cotton_A_30212_BGI-A2_v1.0 [Gossypium arboreum] (15)
| | \------100-----+ /-100+
| | | | \----- Gh_A13G0751 [Gossypium hirsutum] (52)
| | \-97-+
| | \---------- Gorai.013G096100.1 [Gossypium raimondii] (30)
| |
| \-------------------------------------------------------- evm.model.supercontig_1.162 [Carica papaya] (62)
|
\------------------------------------------------------------- Ciclev10032490m [Citrus clementina] (77)
Root part of tree:
/------------------------------------------------------------------ Thecc1EG018981t1 [Theobroma cacao] (1)
|
| /------ Gh_D07G0780 [Gossypium hirsutum] (2)
| /--88-+
| | \------ Gh_A07G0722 [Gossypium hirsutum] (61)
|-------------------------100-------------------------+
| \------------ Gorai.001G090000.1 [Gossypium raimondii] (67)
|
| /------ Gorai.003G103000.1 [Gossypium raimondii] (3)
| /--93-+
| | \------ Gh_D03G0922 [Gossypium hirsutum] (55)
| /-100-+
| | | /------ Gh_A03G0634 [Gossypium hirsutum] (32)
| | \-100-+
| | \------ Cotton_A_34365_BGI-A2_v1.0 [Gossypium arboreum] (57)
| /--76-+
| | | /------ Gh_D07G0671 [Gossypium hirsutum] (6)
+ | | /-100-+
| | | | \------ Gorai.001G075800.1 [Gossypium raimondii] (94)
| | \-100-+
| /--99-+ | /------ Gh_A07G0605 [Gossypium hirsutum] (53)
| | | \--81-+
| | | \------ Cotton_A_29978_BGI-A2_v1.0 [Gossypium arboreum] (74)
| /--72-+ |
| | | \------------------------ Thecc1EG014345t1 [Theobroma cacao] (87)
| | |
| /--70-+ \------------------------------ Eucgr.K02547.1.p [Eucalyptus grandis] (45)
| | |
| /-100-+ \------------------------------------ (143)
| | |
| /-100-+ \------------------------------------------ Eucgr.B00634.1.p [Eucalyptus grandis] (24)
| | |
| /--99-+ \------------------------------------------------ (196)
| | |
\-100-+ \------------------------------------------------------ Eucgr.I02059.1.p [Eucalyptus grandis] (150)
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\------------------------------------------------------------ Ciclev10012594m [Citrus clementina] (58)
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