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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM808
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 188:
/--------------------------------- Tp6g23010 [Thellungiella parvula] (9)
|
| /----- RrC2707_p1 [Raphanus raphanistrum] (13)
| /----100---+
| | \----- Rsa1.0_00883.1_g00005.1 [Raphanus sativus] (57)
| |
| /-100-+ /----- GSBRNA2T00148871001 [Brassica napus] (25)
| | | /-100-+
| | | | \----- XP_009131867.1 [Brassica rapa] (34)
| | \-100+
/-97-+ | | /----- GSBRNA2T00140919001 [Brassica napus] (43)
| | | \-100-+
| | | \----- XP_013622097.1 [Brassica oleracea] (55)
| | /-100+
| | | | /----- XP_009120677.1 [Brassica rapa] (20)
| | | | /--96-+
| | | | | \----- GSBRNA2T00154124001 [Brassica napus] (67)
| | | | /-100+
/-100-+ | | | | | /----- XP_013608798.1 [Brassica oleracea] (60)
| | \-100-+ | | \-100-+
| | | \-100-+ \----- GSBRNA2T00106268001 [Brassica napus] (100)
| | | |
| | | \---------------- Rsa1.0_00010.1_g00026.1 [Raphanus sativus] (33)
| | |
| | \--------------------------- 676786322 [Sisymbrium irio] (18)
| |
| \-------------------------------------- Thhalv10015650m [Eutrema salsugineum] (77)
/-88-+
| | /----- 489072 [Arabidopsis lyrata] (30)
| | /-100-+
| | | \----- Araha.16261s0003.1.p [Arabidopsis halleri] (116)
| | /------100------+
| | | \----------- AT5G22220.2 [Arabidopsis thaliana] (160)
| | |
| | | /----- Cagra.5627s0006.1.p [Capsella grandiflora] (46)
| | | /----100---+
| \-------100------+ | \----- Carubv10003027m [Capsella rubella] (92)
/-100-+ | |
| | | /-100-+ /----- Csa08g015400.1 [Camelina sativa] (73)
| | | | | /--82-+
| | | | | | \----- Csa20g035800.1 [Camelina sativa] (91)
| | \-95-+ \-100+
| | | \----------- Csa13g025680.1 [Camelina sativa] (83)
/-100+ | |
| | | \---------------------- Bostr.26527s0055.1.p [Boechera stricta] (87)
| | |
| | \------------------------------------------------- KFK26334.1 [Arabis alpina] (22)
--100-+ |
| \------------------------------------------------------- AA8G00251 [Aethionema arabicum] (16)
|
| /----- XP_010520454.1 [Tarenaya hassleriana] (17)
\--------------------------100-------------------------+
\----- XP_010535712.1 [Tarenaya hassleriana] (76)
Subtree rooted at node 162:
/----- Csa17g074300.1 [Camelina sativa] (4)
/-100+
| \----- Csa14g051780.1 [Camelina sativa] (110)
/-100+
| \---------- Csa03g051560.1 [Camelina sativa] (94)
/-100+
| | /----- Carubv10009432m [Capsella rubella] (59)
| \---100---+
| \----- Cagra.1843s0001.1.p [Capsella grandiflora] (79)
/-100+
| | /----- Araha.3979s0001.1.p [Arabidopsis halleri] (27)
| | /-99-+
| | | \----- 314229 [Arabidopsis lyrata] (112)
/----100---+ \---100---+
| | \---------- AT1G47870.1 [Arabidopsis thaliana] (75)
| |
| \------------------------- Bostr.15654s0048.1.p [Boechera stricta] (86)
|
| /----- XP_009107400.1 [Brassica rapa] (8)
| /-100+
| | \----- GSBRNA2T00094943001 [Brassica napus] (45)
| /-100+
| | | /----- XP_013602158.1 [Brassica oleracea] (85)
| | \-100+
/-91-+ /-100+ \----- GSBRNA2T00002070001 [Brassica napus] (89)
| | | |
| | | | /----- RrC11010_p1 [Raphanus raphanistrum] (63)
| | | \---100---+
| | /-100+ \----- Rsa1.0_01616.1_g00006.1 [Raphanus sativus] (150)
| | | |
| | | | /----- Rsa1.0_03305.1_g00007.1 [Raphanus sativus] (28)
| | | \------100-----+
/-100+ | /-100+ \----- RrC11711_p1 [Raphanus raphanistrum] (50)
| | | | |
| | | | | /----- Tp1g34840 [Thellungiella parvula] (118)
| | \-100-+ \---------67--------+
| | | \----- 676737504 [Sisymbrium irio] (121)
| | |
/-100+ | \------------------------------ Thhalv10011567m [Eutrema salsugineum] (111)
| | |
| | \----------------------------------------- KFK29073.1 [Arabis alpina] (35)
| |
| | /----- XP_010530521.1 [Tarenaya hassleriana] (47)
| \-------------------100------------------+
/-52-+ \----- XP_010539053.1 [Tarenaya hassleriana] (120)
| |
| | /----- Neem_6527_f_1 [Azadirachta indica] (19)
| | /-100+
| | | \----- Neem_39617_f_1 [Azadirachta indica] (21)
/-100+ \-------------------100------------------+
| | | /----- Ciclev10001165m [Citrus clementina] (130)
| | \-100+
| | \----- orange1.1g015878m [Citrus sinensis] (115)
--64-+ |
| \-------------------------------------------------------- Thecc1EG046885t1 [Theobroma cacao] (44)
|
\------------------------------------------------------------- XP_010557435.1 [Tarenaya hassleriana] (74)
Subtree rooted at node 233:
/----- Gh_A09G0927 [Gossypium hirsutum] (2)
/-99-+
| \----- Cotton_A_30259_BGI-A2_v1.0 [Gossypium arboreum] (38)
/---100---+
| | /----- Gorai.006G114300.1 [Gossypium raimondii] (24)
| \-100+
| \----- Gh_D09G0956 [Gossypium hirsutum] (88)
|
/-73-+ /----- Gorai.013G257100.1 [Gossypium raimondii] (14)
| | /-95-+
| | | \----- Gh_D13G2317 [Gossypium hirsutum] (190)
| | /-100+
| | | \---------- Cotton_A_02626_BGI-A2_v1.0 [Gossypium arboreum] (81)
| \-91-+
/-100+ \--------------- Thecc1EG041291t2 [Theobroma cacao] (170)
| |
| | /---------- Gorai.001G123900.1 [Gossypium raimondii] (7)
| | |
| | |---------- Gh_D07G1097 [Gossypium hirsutum] (62)
| \------100-----+
| | /----- Gh_A07G1021 [Gossypium hirsutum] (64)
/-100-+ \-100+
| | \----- Cotton_A_09611_BGI-A2_v1.0 [Gossypium arboreum] (180)
| |
| | /----- Ciclev10028409m [Citrus clementina] (3)
| | /-100+
| | | \----- orange1.1g012778m [Citrus sinensis] (68)
| \--------100--------+
/-64-+ | /----- Neem_25150_f_1 [Azadirachta indica] (36)
| | \-100+
| | \----- Neem_11537_f_2 [Azadirachta indica] (99)
| |
| | /----- (162)
| | /-64-+
/-99-+ | | \----- (188)
| | \------------64-----------+
| | \---------- evm.model.supercontig_195.40 [Carica papaya] (78)
| |
| | /----- Eucgr.J00539.1.p [Eucalyptus grandis] (93)
/-90-+ \----------------100----------------+
| | \----- EcC050499.40 [Eucalyptus camaldulensis] (96)
| |
| | /----- EcC048317.10 [Eucalyptus camaldulensis] (23)
/-55-+ \-------------------100------------------+
| | \----- Eucgr.A02602.1.p [Eucalyptus grandis] (48)
| |
| \--------------------------------------------------- evm.model.supercontig_104.59 [Carica papaya] (97)
|
| /----- Araha.1729s0004.1.p [Arabidopsis halleri] (5)
| /-100+
| | \----- 482574 [Arabidopsis lyrata] (114)
| /---100---+
| | \---------- AT2G36010.2 [Arabidopsis thaliana] (113)
| |
| | /----- Csa04g049460.1 [Camelina sativa] (10)
| /-95-+ /-100+
| | | | \----- Csa06g038630.1 [Camelina sativa] (15)
| | | /-100+
| | | | \---------- Csa05g018090.1 [Camelina sativa] (52)
| | \-100+
| /-100+ | /----- Carubv10022932m [Capsella rubella] (51)
| | | \---100---+
| | | \----- Cagra.0993s0113.1.p [Capsella grandiflora] (140)
| /--97-+ |
| | | \------------------------- Bostr.23794s0493.1.p [Boechera stricta] (72)
| | |
| | \------------------------------ KFK36495.1 [Arabis alpina] (39)
| |
| | /----- XP_009133061.1 [Brassica rapa] (11)
| | /-100+
| | | \----- GSBRNA2T00141838001 [Brassica napus] (26)
| | |
| | | /----- GSBRNA2T00132443001 [Brassica napus] (32)
| | /---100---+-100+
| | | | \----- XP_013625114.1 [Brassica oleracea] (66)
/-100+ | | |
| | | | | /----- Rsa1.0_03723.1_g00003.1 [Raphanus sativus] (49)
| | | | \-100+
| | | | \----- RrC5810_p1 [Raphanus raphanistrum] (54)
| | | /-100+
| | /-100+ | | /----- XP_009141554.1 [Brassica rapa] (31)
| | | | | | /-100+
| | | | | | | \----- GSBRNA2T00077252001 [Brassica napus] (120)
| | | | | | /-100+
| | | | | | | \---------- XP_013631837.1 [Brassica oleracea] (41)
| | | | | \-100+
| | | | | | /----- Rsa1.0_00308.1_g00005.1 [Raphanus sativus] (56)
| | | | | \---100---+
| | | | | \----- RrC9694_p3 [Raphanus raphanistrum] (65)
| | | | /-100+
| | | | | | /----- XP_013631649.1 [Brassica oleracea] (12)
| | | | | | /-100+
| | /-100+ | | | | \----- GSBRNA2T00141197001 [Brassica napus] (53)
| | | | | | | /-100+
| | | | | | | | | /----- GSBRNA2T00117117001 [Brassica napus] (71)
| | | | | | | | \-100+
| | | | \--50-+ | /-100+ \----- XP_009143621.1 [Brassica rapa] (90)
| | | | | | | |
--67-+ | | | | \-98-+ \--------------- 676787872 [Sisymbrium irio] (42)
| | | | | |
| | /-100+ | | \-------------------- Tp4g18270 [Thellungiella parvula] (80)
| | | | | |
| | | | | \------------------------------ Thhalv10016580m [Eutrema salsugineum] (95)
| | | | |
| | | | \----------------------------------------- AA60G00193 [Aethionema arabicum] (119)
| | | |
| | | | /----- XP_010520690.1 [Tarenaya hassleriana] (6)
| \-82-+ \-------------------100------------------+
| | \----- XP_010527132.1 [Tarenaya hassleriana] (61)
| |
| | /----- orange1.1g015627m [Citrus sinensis] (37)
| | /-100+
| | | \----- Ciclev10011632m [Citrus clementina] (82)
| \-------------------100------------------+
| | /----- Neem_7267_f_1 [Azadirachta indica] (69)
| \-100+
| \----- Neem_29359_f_1 [Azadirachta indica] (117)
|
| /----- Gh_Sca005145G01 [Gossypium hirsutum] (84)
| /-100+
| | \----- Gorai.007G366600.1 [Gossypium raimondii] (98)
\------------------------100-----------------------+
\---------- Cotton_A_38746_BGI-A2_v1.0 [Gossypium arboreum] (110)
Root part of tree:
/------------------------------------------------------------------ Gh_A01G2098 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------ Cotton_A_39109_BGI-A2_v1.0 [Gossypium arboreum] (29)
|
+ /---------------------- (233)
| /---------100---------+
| | \---------------------- Thecc1EG022853t1 [Theobroma cacao] (40)
\----------97---------+
| /---------------------- Gh_D01G1236 [Gossypium hirsutum] (58)
\---------100---------+
\---------------------- Gorai.002G157200.1 [Gossypium raimondii] (70)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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