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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM821
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 210:
/---------- Neem_868_f_1 [Azadirachta indica] (3)
|
/---------76--------+ /----- orange1.1g026365m [Citrus sinensis] (37)
| \-100+
| \----- Ciclev10026374m [Citrus clementina] (76)
|
| /----- Gh_A11G1963 [Gossypium hirsutum] (12)
| /-100+
| | \----- Cotton_A_16830_BGI-A2_v1.0 [Gossypium arboreum] (36)
| /------100-----+
/---------63---------+ | | /----- Gh_D11G2012 [Gossypium hirsutum] (49)
| | | \-95-+
| | | \----- Gorai.007G222000.1 [Gossypium raimondii] (118)
| | |
| | | /----- Cotton_A_38801_BGI-A2_v1.0 [Gossypium arboreum] (21)
| | | /-89-+
| | | | \----- Gh_A12G0696 [Gossypium hirsutum] (58)
| | | /-100+
| \-100+ | | /----- Gh_D12G0701 [Gossypium hirsutum] (62)
| | | \-100+
| | | \----- Gorai.008G081100.1 [Gossypium raimondii] (98)
| | /-91-+
| | | | /----- Cotton_A_26935_BGI-A2_v1.0 [Gossypium arboreum] (27)
| | | | /-95-+
| | | | | \----- Gh_A11G0447 [Gossypium hirsutum] (111)
| | | \-100+
| \-82-+ | /----- Gh_D11G0518 [Gossypium hirsutum] (44)
| | \-100+
| | \----- Gorai.007G056300.1 [Gossypium raimondii] (180)
| |
| \-------------------- Thecc1EG000766t1 [Theobroma cacao] (94)
|
| /----- Rsa1.0_01053.1_g00008.1 [Raphanus sativus] (4)
| /-100+
| | \----- RrC4308_p1 [Raphanus raphanistrum] (112)
| /-100+
| | | /----- XP_013636936.1 [Brassica oleracea] (57)
| | \-100+
| | \----- GSBRNA2T00131148001 [Brassica napus] (61)
| /-100+
| | | /----- XP_013610244.1 [Brassica oleracea] (30)
| | | /-100+
| | | | \----- GSBRNA2T00134763001 [Brassica napus] (48)
| | \-100+
| | | /----- GSBRNA2T00121588001 [Brassica napus] (140)
| | \-100+
| | \----- XP_009134786.1 [Brassica rapa] (115)
| |
| /-84-+ /----- GSBRNA2T00100193001 [Brassica napus] (45)
| | | /-100+
| | | | \----- XP_013595574.1 [Brassica oleracea] (150)
| | |---100---+
| | | | /----- XP_009138496.1 [Brassica rapa] (75)
| /-91-+ | \-100+
| | | | \----- GSBRNA2T00043279001 [Brassica napus] (99)
| | | |
| | | \-------------------- 676745192 [Sisymbrium irio] (121)
| | |
| /--87-+ \------------------------- Tp7g35220 [Thellungiella parvula] (110)
| | |
| | |------------------------------ KFK30371.1 [Arabis alpina] (6)
| | |
| | \------------------------------ Thhalv10026086m [Eutrema salsugineum] (55)
| |
| | /---------- Csa12g003810.1 [Camelina sativa] (8)
| | |
/-81-+ | /-100+ /----- Csa10g003560.1 [Camelina sativa] (40)
| | /-100+ | \-91-+
| | | | | \----- Csa11g004020.1 [Camelina sativa] (170)
| | | | |
| | | | /-97-+ /----- Carubv10005616m [Capsella rubella] (28)
| | | | | | /-100+
| | | | | | | \----- Cagra.10957s0002.1.p [Capsella grandiflora] (96)
| | | | | \-99-+
| | | | | \---------- Bostr.7867s1612.1.p [Boechera stricta] (33)
| | /-100+ \------100------+
| | | | | /----- 490864 [Arabidopsis lyrata] (71)
| | | | | /-100+
| | | | | | \----- Araha.2549s0012.1.p [Arabidopsis halleri] (82)
| | | | \---100---+
| |-100+ | \---------- AT4G37540.1 [Arabidopsis thaliana] (100)
| | | |
| | | \----------------------------------------- AA30G00265 [Aethionema arabicum] (60)
| | |
| | \---------------------------------------------- XP_010531582.1 [Tarenaya hassleriana] (84)
| |
| | /----- Gorai.010G025100.1 [Gossypium raimondii] (5)
| | /-100+
| | | \----- Gh_D06G2304 [Gossypium hirsutum] (85)
| | /-100+
| | | \---------- Cotton_A_14848_BGI-A2_v1.0 [Gossypium arboreum] (51)
| | /-98-+
| | | \--------------- Thecc1EG034722t1 [Theobroma cacao] (90)
| | |
| | | /---------- Gh_A05G1814 [Gossypium hirsutum] (14)
| | /-100+ |
| | | | /-97-+ /----- Gh_D05G2010 [Gossypium hirsutum] (73)
| | | | | \-100+
| | | \-100+ \----- Gorai.009G218800.1 [Gossypium raimondii] (95)
| | /-75-+ |
| | | | \--------------- Cotton_A_23498_BGI-A2_v1.0 [Gossypium arboreum] (23)
| | | |
| | | | /----- EcC050352.10 [Eucalyptus camaldulensis] (18)
| | | \--------100--------+
| | /--68-+ \----- Eucgr.F00115.1.p [Eucalyptus grandis] (24)
| | | |
| | | | /----- orange1.1g029809m [Citrus sinensis] (7)
| | | | /-100+
| | | | | \----- Ciclev10003746m [Citrus clementina] (42)
| | /-98-+ \---------99--------+
| | | | | /----- Neem_26138_f_1 [Azadirachta indica] (20)
| | | | \-100+
| | | | \----- Neem_5060_f_7 [Azadirachta indica] (89)
| |----56---+ |
| | | \------------------------------------ evm.model.supercontig_21.100 [Carica papaya] (59)
| | |
| | \----------------------------------------- XP_010556439.1 [Tarenaya hassleriana] (116)
| |
| |--------------------------------------------------- Eucgr.H02293.1.p [Eucalyptus grandis] (31)
/-78-+ |
| | |--------------------------------------------------- Eucgr.G01261.1.p [Eucalyptus grandis] (41)
| | |
| | \--------------------------------------------------- evm.model.supercontig_6.40 [Carica papaya] (93)
| |
| | /----- Csa04g035520.1 [Camelina sativa] (10)
| | /-99-+
| | | \----- Csa09g052720.1 [Camelina sativa] (52)
| | /-100+
| | | \---------- Csa06g024010.1 [Camelina sativa] (68)
| | /-87-+
| | | \--------------- Bostr.6864s0247.1.p [Boechera stricta] (86)
| | |
| | | /----- Carubv10017944m [Capsella rubella] (16)
| | /-100+------100-----+
| | | | \----- Cagra.4491s0014.1.p [Capsella grandiflora] (87)
| | | |
| | | | /----- AT3G49940.1 [Arabidopsis thaliana] (19)
| | /----100---+ \------95------+
| | | | \----- 906311 [Arabidopsis lyrata] (81)
| | | |
| | | \------------------------- KFK34261.1 [Arabis alpina] (29)
| | |
| | | /----- Thhalv10010666m [Eutrema salsugineum] (13)
| | | /-----------95-----------+
| | | | \----- Tp5g12170 [Thellungiella parvula] (53)
| | | |
| |--------100--------+ | /----- RrC23100_p1 [Raphanus raphanistrum] (15)
| | | | /---100---+
--85-+ | | | | \----- Rsa1.0_00383.1_g00025.1 [Raphanus sativus] (66)
| | | | |
| | | | /-100+ /----- XP_009136529.1 [Brassica rapa] (25)
| | | | | | /-71-+
| | | | | | | \----- GSBRNA2T00113484001 [Brassica napus] (97)
| | | | | \-100+
| | \-100-+ | | /----- GSBRNA2T00021484001 [Brassica napus] (69)
| | | | \-100+
| | | | \----- XP_013595370.1 [Brassica oleracea] (77)
| | | /-100+
| | | | | /----- XP_009123772.1 [Brassica rapa] (46)
| | | | | /-100+
| | | | | | \----- XP_009115680.1 [Brassica rapa] (122)
| | | | | /-100+
| | | | | | | /----- XP_013603164.1 [Brassica oleracea] (64)
| | | | | | \-100+
| | \-96-+ \-100+ \----- GSBRNA2T00001972001 [Brassica napus] (119)
| | | |
| | | | /----- Rsa1.0_03317.1_g00001.1 [Raphanus sativus] (65)
| | | \---100---+
| | | \----- RrC10478_p1 [Raphanus raphanistrum] (78)
| | |
| | \------------------------- 676739854 [Sisymbrium irio] (43)
| |
| \-------------------------------------------------------- AA13G00092 [Aethionema arabicum] (130)
|
| /---------- XP_010550337.1 [Tarenaya hassleriana] (26)
| |
\------------------------96------------------------+ /----- XP_010559050.1 [Tarenaya hassleriana] (160)
\-100+
\----- XP_010547547.1 [Tarenaya hassleriana] (110)
Root part of tree:
/------------------------------------------------------------------ RrC5178_p2 [Raphanus raphanistrum] (1)
|
|------------------------------------------------------------------ Rsa1.0_03962.1_g00002.1 [Raphanus sativus] (11)
|
| /------------------------------------- AT5G67420.1 [Arabidopsis thaliana] (2)
| |
| | /------- Csa11g103430.1 [Camelina sativa] (9)
| | /--100--+
| | | \------- Csa02g075240.1 [Camelina sativa] (120)
| /--54--+ /--100-+
| | | | \--------------- Csa18g040020.1 [Camelina sativa] (32)
| | | /--99--+
| | | | | /------- Cagra.0342s0030.1.p [Capsella grandiflora] (63)
| | | | \------100-----+
| /--85--+ \---91--+ \------- Carubv10027507m [Capsella rubella] (114)
| | | |
| | | \----------------------------- Bostr.0568s0168.1.p [Boechera stricta] (72)
| | |
| | | /------- Araha.0399s0001.1.p [Arabidopsis halleri] (34)
| | \-----------------98-----------------+
| | \------- 496854 [Arabidopsis lyrata] (38)
| |
| |--------------------------------------------------- (210)
| |
| |--------------------------------------------------- Tp2g29230 [Thellungiella parvula] (17)
+ |
| |--------------------------------------------------- KFK28429.1 [Arabis alpina] (22)
| |
| | /------- GSBRNA2T00024836001 [Brassica napus] (35)
| | |
| | /---92--+------- XP_009130544.1 [Brassica rapa] (56)
| | | |
| | | \------- GSBRNA2T00064809001 [Brassica napus] (80)
| |----------------100----------------+
| | | /------- GSBRNA2T00076878001 [Brassica napus] (79)
| /---89--+ \--100--+
| | | \------- XP_013616335.1 [Brassica oleracea] (117)
| | |
| | |--------------------------------------------------- 676752026 [Sisymbrium irio] (39)
| | |
| | | /------- GSBRNA2T00066946001 [Brassica napus] (54)
| | | /--100--+
| | | | \------- XP_013593247.1 [Brassica oleracea] (74)
| | | /--99--+
| | | | | /------- Rsa1.0_01791.1_g00002.1 [Raphanus sativus] (67)
| | | | \--100--+
| | |-------------99-------------+ \------- RrC2374_p1 [Raphanus raphanistrum] (113)
| | | |
| | | | /------- GSBRNA2T00063601001 [Brassica napus] (83)
\--100-+ | \------100-----+
| | \------- XP_009103421.1 [Brassica rapa] (92)
| |
| |--------------------------------------------------- Thhalv10004811m [Eutrema salsugineum] (91)
| |
| | /------- RrC24145_p1 [Raphanus raphanistrum] (190)
| \---------------------51--------------------+
| \------- Rsa1.0_00481.1_g00010.1 [Raphanus sativus] (120)
|
| /------- XP_013607417.1 [Brassica oleracea] (47)
| /---99--+
| | \------- XP_013587456.1 [Brassica oleracea] (88)
| /--100-+
| | \--------------- GSBRNA2T00134844001 [Brassica napus] (70)
\-----------------100----------------+
\---------------------- XP_009112217.1 [Brassica rapa] (50)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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