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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM837
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 159:
/------------------------- Bostr.7903s0021.1.p [Boechera stricta] (2)
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| /---------- Csa09g002790.1 [Camelina sativa] (23)
| |
| /-100+ /----- Csa06g001460.1 [Camelina sativa] (58)
/------100------+ | \-100+
| | | \----- Csa04g002660.1 [Camelina sativa] (150)
| | /-88-+
| | | | /----- AT2G01570.1 [Arabidopsis thaliana] (99)
| | | \---100---+
| \-52-+ \----- 484073 [Arabidopsis lyrata] (111)
| |
| | /----- Carubv10018534m [Capsella rubella] (30)
| \------100-----+
| \----- Cagra.2235s0013.1.p [Capsella grandiflora] (51)
|
| /----- RrC44649_p1 [Raphanus raphanistrum] (3)
| /------100-----+
/-96-+ | \----- Rsa1.0_00118.1_g00012.1 [Raphanus sativus] (120)
| | |
| | | /----- GSBRNA2T00117722001 [Brassica napus] (17)
| | /------100------+ /-100+
| | | | | \----- GSBRNA2T00042826001 [Brassica napus] (52)
| | | | /-99-+
| | | | | \---------- XP_013611782.1 [Brassica oleracea] (44)
| | | \-100+
| | | \--------------- XP_009114228.1 [Brassica rapa] (65)
| | |
| | | /-------------------- 676758158 [Sisymbrium irio] (18)
| | | |
| | | | /----- GSBRNA2T00060177001 [Brassica napus] (43)
| \-100+ | /-72-+
/-100+ | /-100+ | \----- XP_013598468.1 [Brassica oleracea] (110)
| | | | | /-100+
| | | | | | | /----- Rsa1.0_00724.1_g00003.1 [Raphanus sativus] (80)
| | | | | | \-100+
| | | | \-100+ \----- RrC9170_p1 [Raphanus raphanistrum] (88)
| | | /-63-+ |
| | | | | | /----- GSBRNA2T00001878001 [Brassica napus] (56)
| | | | | \---100---+
/-100+ | | | | \----- XP_009101333.1 [Brassica rapa] (71)
| | | \--63-+ |
| | | | \------------------------- Tp2g13010 [Thellungiella parvula] (49)
| | | |
| | | \------------------------------ Thhalv10005482m [Eutrema salsugineum] (19)
| | |
| | \---------------------------------------------- KFK33379.1 [Arabis alpina] (24)
| |
| \--------------------------------------------------- AA53G00639 [Aethionema arabicum] (39)
|
| /---------- Csa14g018090.1 [Camelina sativa] (6)
| |
| /-100+ /----- Csa17g020500.1 [Camelina sativa] (66)
| | \-56-+
| /-100+ \----- Csa03g018730.1 [Camelina sativa] (98)
/-99-+ | |
| | | \--------------- Bostr.7128s0107.1.p [Boechera stricta] (41)
| | /-93-+
| | | | /----- Cagra.3501s0003.1.p [Capsella grandiflora] (55)
| | | \------100-----+
| | | \----- Carubv10008833m [Capsella rubella] (190)
| | /-100+
| | | | /----- Araha.16864s0002.1.p [Arabidopsis halleri] (37)
| | | | /-100+
| | | | | \----- 471680 [Arabidopsis lyrata] (69)
| | /-100-+ \------100-----+
--100+ | | | \---------- AT1G14920.1 [Arabidopsis thaliana] (114)
| | | |
| | | | /----- Thhalv10007323m [Eutrema salsugineum] (8)
| \---------99--------+ \-----------100----------+
| | \----- KFK26113.1 [Arabis alpina] (86)
| |
| \------------------------------------ AA14G00090 [Aethionema arabicum] (76)
|
| /----- XP_010527787.1 [Tarenaya hassleriana] (16)
| /-100+
| | \----- XP_010553798.1 [Tarenaya hassleriana] (45)
\------------------------100-----------------------+
\---------- XP_010554410.1 [Tarenaya hassleriana] (68)
Subtree rooted at node 228:
/------------------------------ (159)
|
| /---------- Gorai.002G177000.1 [Gossypium raimondii] (14)
| |
| /-100+ /----- Gh_D01G1446 [Gossypium hirsutum] (35)
| | \-100+
| /-100+ \----- Gh_A01G1242 [Gossypium hirsutum] (117)
/--------------93--------------+ | |
| | | \--------------- Thecc1EG010965t1 [Theobroma cacao] (73)
| | /-92-+
| | | | /--------------- Eucgr.G02163.1.p [Eucalyptus grandis] (33)
| | | | |
| | | \-97-+ /---------- Neem_13164_f_1 [Azadirachta indica] (38)
| | | | |
| \-87-+ \-100+ /----- orange1.1g043131m [Citrus sinensis] (63)
| | \-100+
| | \----- Ciclev10017466m [Citrus clementina] (84)
| |
| \------------------------- evm.model.supercontig_2.240 [Carica papaya] (36)
|
| /----- Carubv10003592m [Capsella rubella] (4)
| /--------100--------+
| | \----- Cagra.6170s0019.1.p [Capsella grandiflora] (59)
| |
| | /-------------------- Bostr.26527s0463.1.p [Boechera stricta] (21)
| /-88-+ |
| | | | /----- Csa04838s010.1 [Camelina sativa] (53)
| | | | /-100+
| | \-52-+ | \----- Csa08g009700.1 [Camelina sativa] (92)
| | | /-97-+
| /--87-+ | | \---------- Csa13g020270.1 [Camelina sativa] (60)
| | | \-100+
| | | \--------------- Csa20g025660.1 [Camelina sativa] (116)
| | |
| | | /----- AT5G17490.1 [Arabidopsis thaliana] (25)
| | \-----------100----------+
| | \----- 488615 [Arabidopsis lyrata] (89)
| |
| | /----- RrC48_p11 [Raphanus raphanistrum] (7)
| | /---100---+
| | | \----- Rsa1.0_19218.1_g00001.1 [Raphanus sativus] (42)
| /-73-+ |
| | | /-100+ /----- XP_013605972.1 [Brassica oleracea] (22)
| | | | | /-100+
| | | | | | \----- GSBRNA2T00094828001 [Brassica napus] (82)
| | | | \-100+
| | | /-63-+ | /----- GSBRNA2T00065871001 [Brassica napus] (81)
| | | | | \-63-+
| | | | | \----- XP_009107522.1 [Brassica rapa] (115)
| /-100+ | /-86-+ |
| | | | | | \-------------------- Tp6g26730 [Thellungiella parvula] (130)
| | | | | |
| | | \-100-+ \------------------------- 676788954 [Sisymbrium irio] (61)
| | | |
| | | \------------------------------ Thhalv10015535m [Eutrema salsugineum] (62)
| | |
| | \----------------------------------------- KFK25966.1 [Arabis alpina] (85)
| |
--73-+ | /---------- XP_009130367.1 [Brassica rapa] (10)
| | |
| | /-69-+ /----- GSBRNA2T00076093001 [Brassica napus] (48)
| | | \-100+
| | /-100+ \----- GSBRNA2T00097285001 [Brassica napus] (54)
| | | |
| | | \--------------- XP_013637838.1 [Brassica oleracea] (87)
| | /-100+
| | | | /----- RrC2589_p5 [Raphanus raphanistrum] (29)
| | | \------97------+
| | /-100+ \----- Rsa1.0_01285.1_g00014.1 [Raphanus sativus] (180)
| /-100+ | |
| | | | \------------------------- 676731188 [Sisymbrium irio] (26)
| | | |
| | | /--80-+------------------------------ KFK38060.1 [Arabis alpina] (32)
| | | | |
| | | | | /----- Thhalv10020431m [Eutrema salsugineum] (78)
| | | | \-----------68-----------+
| | | | \----- Tp3g02450 [Thellungiella parvula] (112)
| | | |
| | | | /----- Araha.10914s0007.1.p [Arabidopsis halleri] (13)
| | | /-100+ /-100+
| | | | | | \----- 477591 [Arabidopsis lyrata] (100)
| | | | | /------100-----+
| | | | | | \---------- AT3G03450.1 [Arabidopsis thaliana] (20)
| | | | | |
| /-100+ | | | | /-------------------- Bostr.19046s0061.1.p [Boechera stricta] (31)
| | | | | \----100---+ |
| | | | | | | /---------- Csa19g005580.1 [Camelina sativa] (67)
| | | | | | | |
| | | \-100+ \-98-+ /-100+ /----- Csa01g003150.1 [Camelina sativa] (79)
| | | | | | \-100+
| | | | | | \----- Csa15g003230.1 [Camelina sativa] (120)
| | | | \-100+
| | | | | /----- Carubv10015212m [Capsella rubella] (70)
| | | | \---100---+
| | | | \----- Cagra.2098s0043.1.p [Capsella grandiflora] (118)
| | | |
| | | \----------------------------------------- AA10G00264 [Aethionema arabicum] (140)
| | |
| | | /----- XP_010549753.1 [Tarenaya hassleriana] (11)
| | \---------------------100---------------------+
| | \----- XP_010558681.1 [Tarenaya hassleriana] (40)
| |
| | /------------------------------ Thhalv10018436m [Eutrema salsugineum] (9)
| | |
| | | /----- XP_013612911.1 [Brassica oleracea] (27)
| | | /-100+
| | | | \----- GSBRNA2T00014999001 [Brassica napus] (57)
| | | /-100+
| | | | | /----- GSBRNA2T00003199001 [Brassica napus] (74)
\-100+ /-100-+ | \-97-+
| | | /-100+ \----- XP_009127484.1 [Brassica rapa] (121)
| | | | |
| | | | | /----- RrC8312_p1 [Raphanus raphanistrum] (28)
| | | /-100+ \---100---+
| | | | | \----- Rsa1.0_01442.1_g00001.1 [Raphanus sativus] (119)
| | | | |
| | \-100+ \-------------------- Tp5g21380 [Thellungiella parvula] (47)
| /-100+ |
| | | \------------------------- 676766782 [Sisymbrium irio] (50)
| | |
| | | /----- AT1G66350.1 [Arabidopsis thaliana] (12)
| | | /---------66--------+
| | | | \----- 475738 [Arabidopsis lyrata] (90)
| | | |
| | | | /-------------------- Bostr.26959s0284.1.p [Boechera stricta] (15)
| | \----100---+ |
| | | | /----- Csa16g023800.1 [Camelina sativa] (46)
| /-100+ | | /-82-+
| | | \-100+ | \----- Csa07g030410.1 [Camelina sativa] (75)
| | | | /-100+
| | | | | \---------- Csa05g075230.1 [Camelina sativa] (72)
| | | \-100+
| | | | /----- Carubv10020171m [Capsella rubella] (91)
\---100---+ | \---100---+
| | \----- Cagra.0463s0002.1.p [Capsella grandiflora] (97)
| |
| \----------------------------------------- KFK41051.1 [Arabis alpina] (170)
|
| /----- XP_010528540.1 [Tarenaya hassleriana] (83)
\-------------------100------------------+
\----- XP_010551797.1 [Tarenaya hassleriana] (160)
Root part of tree:
/------------------------------------------------------------------ Gorai.001G089400.1 [Gossypium raimondii] (1)
|
|------------------------------------------------------------------ Gh_D07G0779 [Gossypium hirsutum] (110)
|
| /---------------------------- (228)
| |
| | /--------- orange1.1g008153m [Citrus sinensis] (64)
| | /---100---+
| | | \--------- Ciclev10011367m [Citrus clementina] (113)
| /---100---+---100--+
+ | | \------------------- Neem_1023_f_1 [Azadirachta indica] (94)
| | |
| | | /--------- EcS626816.10 [Eucalyptus camaldulensis] (93)
| /---100--+ \--------64--------+
| | | \--------- Eucgr.J01594.1.p [Eucalyptus grandis] (95)
| | |
| /---100---+ \-------------------------------------- evm.model.supercontig_116.43 [Carica papaya] (34)
| | |
| | \----------------------------------------------- Thecc1EG019165t1 [Theobroma cacao] (5)
\---100--+
| /--------- Gh_A07G0717 [Gossypium hirsutum] (77)
\----------------------100----------------------+
\--------- Cotton_A_30811_BGI-A2_v1.0 [Gossypium arboreum] (96)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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