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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM877
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 164:
/----- Gorai.011G289400.1 [Gossypium raimondii] (2)
/-99-+
| \----- Gh_D10G2455 [Gossypium hirsutum] (80)
/--------100--------+
| | /----- Cotton_A_15843_BGI-A2_v1.0 [Gossypium arboreum] (16)
| \-93-+
| \----- Gh_A10G2134 [Gossypium hirsutum] (58)
|
| /----- Gh_A06G1433 [Gossypium hirsutum] (4)
| /-100+
| | \----- Cotton_A_13838_BGI-A2_v1.0 [Gossypium arboreum] (30)
| /-61-+
/-100-+ | \---------- Gh_D06G1781 [Gossypium hirsutum] (45)
| | /-100+
| | | \--------------- Gorai.010G196500.1 [Gossypium raimondii] (38)
| | |
| | /-70-+ /----- Gh_A13G0138 [Gossypium hirsutum] (19)
| | | | /-100+
| | | | | \----- Cotton_A_00988_BGI-A2_v1.0 [Gossypium arboreum] (84)
| | | \---100---+
/-----------100----------+ \-100+ | /----- Gorai.013G017600.1 [Gossypium raimondii] (29)
| | | \-99-+
| | | \----- Gh_D13G0160 [Gossypium hirsutum] (76)
| | |
| | \------------------------- Thecc1EG042489t1 [Theobroma cacao] (21)
| |
| | /----- Ciclev10030920m [Citrus clementina] (69)
| \--------------100-------------+
| \----- orange1.1g006236m [Citrus sinensis] (90)
|
| /---------- AT5G58620.1 [Arabidopsis thaliana] (8)
| |
| /------100-----+ /----- Araha.5856s0005.1.p [Arabidopsis halleri] (34)
| | \-77-+
| | \----- 495985 [Arabidopsis lyrata] (62)
| |
| | /----- Csa11g092360.1 [Camelina sativa] (14)
| | /-64-+
| /----100---+ | \----- Csa18g031800.1 [Camelina sativa] (110)
| | | /-100+
| | | | \---------- Csa02g064250.1 [Camelina sativa] (94)
| | | /-93-+
| | | | | /----- Carubv10026101m [Capsella rubella] (25)
| | | | \---100---+
| | \-100+ \----- Cagra.0891s0057.1.p [Capsella grandiflora] (42)
| /-99-+ |
| | | \-------------------- Bostr.26833s0388.1.p [Boechera stricta] (59)
| | |
| | | /------------------------------ Thhalv10012984m [Eutrema salsugineum] (13)
| | | |
| | | | /------------------------- Tp6g20320 [Thellungiella parvula] (15)
| | | | |
| | \--95-+ | /----- GSBRNA2T00004938001 [Brassica napus] (52)
| | | | /-100+
| | | | | \----- XP_009120378.1 [Brassica rapa] (88)
| | | | /-100+
| /-100+ \-99-+ | | /----- XP_013612376.1 [Brassica oleracea] (55)
| | | | | \-100+
| | | | /-100+ \----- GSBRNA2T00133403001 [Brassica napus] (72)
| | | | | |
| | | | | | /----- Rsa1.0_13967.1_g00001.1 [Raphanus sativus] (61)
| | | \-95-+ \---100---+
--64-+ | | | \----- RrC375_p3 [Raphanus raphanistrum] (73)
| /-100+ | |
| | | | \-------------------- 676738006 [Sisymbrium irio] (54)
| | | |
| | | \----------------------------------------- AA5G00005 [Aethionema arabicum] (83)
| | |
| | | /----- XP_010535371.1 [Tarenaya hassleriana] (9)
| | \-------------------100------------------+
| | \----- XP_010541453.1 [Tarenaya hassleriana] (150)
| |
| | /----- Gorai.001G116400.1 [Gossypium raimondii] (10)
| | /-100+
| | | \----- Gh_D07G1024 [Gossypium hirsutum] (86)
| | /---100---+
| | | | /----- Gh_A07G0945 [Gossypium hirsutum] (71)
| | | \-100+
| | | \----- Cotton_A_09522_BGI-A2_v1.0 [Gossypium arboreum] (93)
| | |
| | | /----- Gh_A09G0850 [Gossypium hirsutum] (22)
| | /-51-+ /-100+
| | | | | \----- Cotton_A_21124_BGI-A2_v1.0 [Gossypium arboreum] (27)
| | | | /-100+
| | | | | | /----- Gh_D09G0872 [Gossypium hirsutum] (50)
| | | | | \-100+
| | | | | \----- Gorai.006G106300.1 [Gossypium raimondii] (92)
| /-100+ | \-100+
| | | | | /----- Gh_A09G0849 [Gossypium hirsutum] (32)
| | | | | /-100+
| | | | | | \----- Cotton_A_21125_BGI-A2_v1.0 [Gossypium arboreum] (64)
| | | | \-100+
| | | | \---------- Cotton_A_21121_BGI-A2_v1.0 [Gossypium arboreum] (68)
| | | |
| | | | /----- Cotton_A_12946_BGI-A2_v1.0 [Gossypium arboreum] (31)
| | | | /-100+
| | | /-100+ | \----- Gh_A05G0730 [Gossypium hirsutum] (36)
| | | | |------100-----+
| | | | | | /----- Gorai.009G091200.1 [Gossypium raimondii] (98)
| | | | | \-100+
| | | | | \----- Gh_D05G0867 [Gossypium hirsutum] (120)
| | | | |
| | | | | /----- Gh_D08G0066 [Gossypium hirsutum] (39)
\-99-+ | | | /-100+
| | | | | \----- Gorai.004G007300.1 [Gossypium raimondii] (100)
| | /--88-+ |------100-----+
| | | | | | /----- Gh_A08G0027 [Gossypium hirsutum] (79)
| | | | | \-99-+
| | | | | \----- Cotton_A_21402_BGI-A2_v1.0 [Gossypium arboreum] (96)
| | | | |
| | | | \------------------------- Thecc1EG041605t1 [Theobroma cacao] (160)
| \------100-----+ |
| | | /----- orange1.1g005264m [Citrus sinensis] (28)
| | \-----------100----------+
| | \----- Ciclev10027883m [Citrus clementina] (63)
| |
| \------------------------------------ evm.model.supercontig_112.6 [Carica papaya] (26)
|
| /----- Eucgr.G03067.1.p [Eucalyptus grandis] (51)
\------------------------100-----------------------+
\----- EcC004212.20 [Eucalyptus camaldulensis] (66)
Subtree rooted at node 191:
/----- (164)
/-100+
| \----- Eucgr.J00202.1.p [Eucalyptus grandis] (57)
/---------------------100---------------------+
| | /----- XP_010554668.1 [Tarenaya hassleriana] (41)
| \-100+
| \----- XP_010534604.1 [Tarenaya hassleriana] (56)
|
| /----- XP_009143241.1 [Brassica rapa] (5)
| /-100+
| | \----- GSBRNA2T00011209001 [Brassica napus] (46)
| /-100+
| | | /----- GSBRNA2T00014964001 [Brassica napus] (60)
| | \-100+
| /-100+ \----- XP_013637248.1 [Brassica oleracea] (140)
| | |
| /-95-+ \--------------- Rsa1.0_00354.1_g00020.1 [Raphanus sativus] (95)
| | |
| | \-------------------- RrC11712_p1 [Raphanus raphanistrum] (24)
| |
| /-100+ /----- Rsa1.0_05362.1_g00001.1 [Raphanus sativus] (6)
| | | /------100-----+
| | | | \----- RrC24910_p1 [Raphanus raphanistrum] (35)
| | | |
| | \-100+ /--------------- GSBRNA2T00124720001 [Brassica napus] (12)
| | | |
/-100+ /--93-+ | | /----- GSBRNA2T00028718001 [Brassica napus] (67)
| | | | \-100+ /-97-+
| | | | | | \----- XP_013621926.1 [Brassica oleracea] (130)
| | | | \-100+
| | /-99-+ | \---------- XP_009133413.1 [Brassica rapa] (75)
| | | | |
| | | | \------------------------------ 676735566 [Sisymbrium irio] (81)
| | /-55-+ |
| | | | \------------------------------------ Tp4g22490 [Thellungiella parvula] (43)
| | | |
| | | \----------------------------------------- Thhalv10016372m [Eutrema salsugineum] (44)
| | |
| | | /---------- Csa04g054400.1 [Camelina sativa] (23)
| | | |
| | | /-100+ /----- Csa06g044480.1 [Camelina sativa] (97)
--100+ | /-100+ | \-60-+
| | | | | \----- Csa05g012690.1 [Camelina sativa] (99)
| | | | /-55-+
| | | | | |--------------- AT2G40140.1 [Arabidopsis thaliana] (77)
| | | | | |
| | | | /-72-+ \--------------- Araha.32835s0001.1.p [Arabidopsis halleri] (91)
| | | | | |
| \-100+ | | \-------------------- Bostr.23794s0043.1.p [Boechera stricta] (49)
| | \---------100--------+
| | | /----- Cagra.2495s0002.1.p [Capsella grandiflora] (40)
| | \--------100--------+
| | \----- Carubv10022848m [Capsella rubella] (74)
| |
| \--------------------------------------------------- AA29G00263 [Aethionema arabicum] (20)
|
\------------------------------------------------------------- AA61G00075 [Aethionema arabicum] (47)
Root part of tree:
/------------------------------------------------------------------ Tp5g06550 [Thellungiella parvula] (1)
|
| /--------- (191)
| /-----------------------94----------------------+
| | \--------- Thhalv10005860m [Eutrema salsugineum] (37)
| |
| | /--------- Cagra.0925s0010.1.p [Capsella grandiflora] (3)
| | /--------100-------+
| | | \--------- Carubv10016897m [Capsella rubella] (89)
| | |
|---100--+ /---100---+ /--------- Csa04g042360.1 [Camelina sativa] (17)
| | | | /---100---+
| | | | | \--------- Csa06g030660.1 [Camelina sativa] (33)
| | /---99---+ \---100--+
| | | | \------------------- Csa09g068150.1 [Camelina sativa] (65)
| | | |
| | | \-------------------------------------- Bostr.20505s0158.1.p [Boechera stricta] (11)
+ \---100---+
| | /--------- 486038 [Arabidopsis lyrata] (48)
| | /---100---+
| | | \--------- Araha.26365s0002.1.p [Arabidopsis halleri] (85)
| \-------------95------------+
| \------------------- AT3G55980.1 [Arabidopsis thaliana] (170)
|
| /--------- XP_013604703.1 [Brassica oleracea] (7)
| /---100---+
| | \--------- GSBRNA2T00156011001 [Brassica napus] (53)
| /---100--+
| | | /--------- GSBRNA2T00014340001 [Brassica napus] (18)
| | \----65---+
| /---100---+ \--------- XP_009116292.1 [Brassica rapa] (78)
| | |
| | | /--------- Rsa1.0_01121.1_g00002.1 [Raphanus sativus] (82)
\------------100------------+ \--------100-------+
| \--------- RrC904_p3 [Raphanus raphanistrum] (87)
|
\-------------------------------------- 676776022 [Sisymbrium irio] (70)
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