Subtree rooted at node 53:

                                                                    /----- orange1.1g004454m [Citrus sinensis]                 (2)
           /---------------------------100--------------------------+                 
           |                                                        \----- Ciclev10014022m [Citrus clementina]                 (28)
           |                                                                          
           |         /---------------------------------------------------- evm.model.supercontig_83.97 [Carica papaya]         (3)
           |         |                                                                
           |         |                                              /----- XP_010522590.1 [Tarenaya hassleriana]               (4)
           |         |     /-------------------100------------------+                 
           |         |     |                                        \----- XP_010556848.1 [Tarenaya hassleriana]               (8)
           |         |     |                                                          
           |         |     |                                        /----- Rsa1.0_00650.1_g00007.1 [Raphanus sativus]          (5)
           |         |     |                              /---100---+                 
           |         |     |                              |         \----- RrC2224_p1 [Raphanus raphanistrum]                  (25)
           |         |     |                              |                           
           |    /-100+     |                        /-100-+         /----- XP_009101732.1 [Brassica rapa]                      (9)
           |    |    |     |                        |     |    /-100+                 
      --100+    |    |     |                        |     |    |    \----- GSBRNA2T00018772001 [Brassica napus]                (23)
           |    |    |     |                        |     \-100+                      
           |    |    |     |                   /-100+          |    /----- XP_013597849.1 [Brassica oleracea]                  (13)
           |    |    |     |                   |    |          \-100+                 
           |    |    |     |                   |    |               \----- GSBRNA2T00158203001 [Brassica napus]                (29)
           |    |    |     |         /---100---+    |                                 
           |    |    |     |         |         |    \--------------------- 676711036 [Sisymbrium irio]                         (12)
           |    |    \-100-+         |         |                                      
           |    |          |         |         \-------------------------- Tp2g09000 [Thellungiella parvula]                   (18)
           |    |          |         |                                                
           |    |          |         |                              /----- Araha.0617s0002.1.p [Arabidopsis halleri]           (6)
           |    |          |         |                         /-100+                 
           |    |          |         |                         |    \----- 494576 [Arabidopsis lyrata]                         (20)
           |    |          |         |         /------100------+                      
           |    |          |         |         |               \---------- AT5G44180.1 [Arabidopsis thaliana]                  (24)
           \-100+          |    /-100+         |                                      
                |          |    |    |         |               /---------- Csa20g071210.1 [Camelina sativa]                    (10)
                |          |    |    |         |               |                      
                |          |    |    |         |          /-100+    /----- Csa11g070510.1 [Camelina sativa]                    (14)
                |          |    |    |    /-100+          |    \-100+                 
                |          |    |    |    |    |          |         \----- Csa18g009600.1 [Camelina sativa]                    (15)
                |          |    |    |    |    |    /-100-+                           
                |          |    |    |    |    |    |     |         /----- Cagra.0381s0009.1.p [Capsella grandiflora]          (16)
                |          \-100+    |    |    |    |     \---100---+                 
                |               |    \-100+    \-100+               \----- Carubv10025737m [Capsella rubella]                  (30)
                |               |         |         |                                 
                |               |         |         \--------------------- Bostr.3148s0041.1.p [Boechera stricta]              (22)
                |               |         |                                           
                |               |         \------------------------------- Thhalv10003131m [Eutrema salsugineum]               (26)
                |               |                                                     
                |               \----------------------------------------- AA32G00371 [Aethionema arabicum]                    (21)
                |                                                                     
                \--------------------------------------------------------- Eucgr.K01058.1.p [Eucalyptus grandis]               (27)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Cotton_A_04480_BGI-A2_v1.0 [Gossypium arboreum]     (1)
      |                                                                               
      |------------------------------------------------------------------- Gh_A12G1284 [Gossypium hirsutum]                    (19)
      |                                                                               
      +                                            /---------------------- (53)
      |                     /----------100---------+                                  
      |                     |                      \---------------------- Thecc1EG008214t2 [Theobroma cacao]                  (17)
      \---------100---------+                                                         
                            |                      /---------------------- Gorai.008G155100.1 [Gossypium raimondii]            (7)
                            \----------100---------+                                  
                                                   \---------------------- Gh_D12G1406 [Gossypium hirsutum]                    (11)