 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGMP1856
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 160:
/----- Traes_6DL_D1C9CE275.1 [Triticum aestivum] (2)
/-99-+
| \----- EMT07857 [Aegilops tauschii] (55)
/-100+
| | /----- Traes_6AL_9C9D677D4.1 [Triticum aestivum] (34)
| \-100+
/-100-+ \----- TRIUR3_24314-P1 [Triticum urartu] (71)
| |
/-100+ \--------------- Traes_6BL_790C095EE.2 [Triticum aestivum] (83)
| |
| \--------------------- MLOC_76165.1 [Hordeum vulgare] (74)
/---100---+
| | /----- Bradi3g54120.1.p [Brachypodium distachyon] (24)
| \---------100--------+
| \----- Brast04G075800.1.p [Brachypodium stacei] (62)
|
| /--------------- OMERI02G33840.1 [Oryza meridionalis] (13)
| |
| | /----- OBART02G35890.1 [Oryza barthii] (30)
| | /-98-+
| | | \----- OGLUM02G37100.1 [Oryza glumaepatula] (64)
| |-81-+
| | | /----- ONIVA02G37950.1 [Oryza nivara] (63)
/-78-+ /-100-+ \-100+
| | | | \----- ORUFI02G37390.1 [Oryza rufipogon] (89)
| | | |
| | | | /----- ORGLA02G0311700.1 [Oryza glaberrima] (35)
| | | |----98---+
| | /-100+ | \----- BGIOSGA005436-PA [Oryza sativa indica] (92)
| | | | |
| | | | \--------------- LOC_Os02g55320.1 [Oryza sativa japonica] (82)
/-72-+ | /-97-+ |
| | | | | \--------------------- OPUNC02G33090.1 [Oryza punctata] (91)
| | | | |
| | \-100+ \-------------------------- LPERR02G29550.1 [Leersia perrieri] (31)
| | |
| | \------------------------------- OB02G42700.1 [Oryza brachyantha] (41)
| |
| \----------------------------------------- PH01000026G0660 [Phyllostachys heterocycla] (60)
|
| /----- Pavir.1KG518100.1.p [Panicum virgatum] (9)
| /-100+
| | \----- Pavir.1NG507000.1.p [Panicum virgatum] (94)
/--76-+ /-100+
| | | \---------- Pahal.A03697.1 [Panicum hallii] (45)
| | |
| | | /----- Seita.1G351300.1.p [Setaria italica] (58)
| | /-100-+---100---+
| | | | \----- Sevir.1G358200.1.p [Setaria viridis] (66)
| | | |
| | /-100+ \--------------- Do016655.1 [Dichanthelium oligosanthes] (90)
| | | |
| | | | /----- Sobic.004G330900.1.p [Sorghum bicolor] (54)
| | | \------100------+
| \---------93--------+ \----- GRMZM2G479110_P01 [Zea mays] (73)
| |
| | /---------- Oropetium_20150105_04506A [Oropetium thomaeum] (57)
| | |
| \------100------+ /----- 462953821 [Eragrostis tef] (72)
| \-100+
| \----- 462891500 [Eragrostis tef] (79)
/-99-+
| | /-------------------------- Spipo28G0010800 [Spirodela polyrhiza] (6)
| | |
| | | /----- PDK_30s962821g001 [Phoenix dactylifera] (8)
| | | /-99-+
| | | | \----- XP_010942127.1 [Elaeis guineensis] (61)
| | | /-99-+
| | | | | /----- PDK_30s839411g004 [Phoenix dactylifera] (27)
| | | | \-100+
| | | /--76-+ \----- XP_010929130.1 [Elaeis guineensis] (75)
| | | | |
| | | | \--------------- Aco016908.1 [Ananas comosus] (29)
| | | |
| | | | /----- GSMUA_Achr11P08310_001 [Musa acuminata] (22)
| | |-61-+ /-100+
| | | | | \----- GSMUA_Achr10P06040_001 [Musa acuminata] (86)
| | | | /-100+
| \------------71-----------+ | | \---------- GSMUA_Achr2P05130_001 [Musa acuminata] (85)
| | \--89-+
| | \--------------- XP_010932234.1 [Elaeis guineensis] (47)
| |
| | /----- PEQU_15120 [Phalaenopsis equestris] (10)
| |---------100--------+
| | \----- PEQU_04606 [Phalaenopsis equestris] (84)
| |
| | /----- GSMUA_AchrUn_randomP18820_001 [Musa acuminata] (19)
| |---------62---------+
| | \----- GSMUA_Achr5P16510_001 [Musa acuminata] (33)
| |
| |-------------------------- Zosma132g00300.1 [Zostera marina] (80)
| |
/-96-+ |-------------------------- Traes_3DS_981B4E4D9.2 [Triticum aestivum] (81)
| | |
| | \-------------------------- Zosma294g00240.1 [Zostera marina] (93)
| |
| | /----- ORUFI06G05490.1 [Oryza rufipogon] (3)
| | |
| | /-100+----- LOC_Os06g08440.1 [Oryza sativa japonica] (14)
| | | |
| | /-100+ \----- BGIOSGA022430-PA [Oryza sativa indica] (18)
| | | |
| | | \---------- ONIVA06G06160.1 [Oryza nivara] (68)
| | |
| | /-100-+--------------- OGLUM06G05540.1 [Oryza glumaepatula] (32)
| | | |
| | | |--------------- ORGLA06G0048800.1 [Oryza glaberrima] (36)
| | /-76-+ |
| | | | \--------------- OBART06G05360.1 [Oryza barthii] (50)
| | | |
| | /-65-+ \--------------------- OMERI06G06380.1 [Oryza meridionalis] (53)
| | | |
| | | \-------------------------- KN539084.1_FGP002 [Oryza longistaminata] (65)
| | |
| | /-100+ /----- ONIVA12G07050.1 [Oryza nivara] (5)
| | | | /-100+
| | | | | \----- ORUFI06G05430.1 [Oryza rufipogon] (40)
--99-+ | /-100+ \---------100--------+
| | | | \---------- KN540603.1_FGP003 [Oryza longistaminata] (69)
| | | |
| | /-97-+ \------------------------------------ OPUNC06G05150.1 [Oryza punctata] (4)
| | | |
| \----100---+ \----------------------------------------- LPERR06G04900.1 [Leersia perrieri] (25)
| |
| \---------------------------------------------- OB06G14930.1 [Oryza brachyantha] (44)
|
| /----------------------------------------- PH01002585G0310 [Phyllostachys heterocycla] (7)
| |
| | /--------------- MLOC_61880.1 [Hordeum vulgare] (16)
| | |
| | | /----- Traes_7AS_1318B59D3.2 [Triticum aestivum] (20)
| | /------100------+ /-100+
| | | | | \----- TRIUR3_25968-P1 [Triticum urartu] (51)
| | | \-100+
| | | | /----- Traes_7DS_22DE624A5.1 [Triticum aestivum] (26)
| | | \-100+
| | | \----- EMT32656 [Aegilops tauschii] (77)
| | |
| | | /---------- TRIUR3_28229-P1 [Triticum urartu] (17)
| | /-100+ |
| | | | /-100+ /----- Traes_7AS_DECB8080D.1 [Triticum aestivum] (43)
| | | | | \-83-+
\---------100--------+ | | /--97-+ \----- Traes_7AS_503B57D77.1 [Triticum aestivum] (67)
| | | | |
| | | /-78-+ \--------------- TRIUR3_26858-P1 [Triticum urartu] (46)
| | | | |
| | | | \--------------------- Traes_7BS_17C8D2707.1 [Triticum aestivum] (76)
|-100+ \-99-+
| | | /---------- MLOC_11341.2 [Hordeum vulgare] (38)
| | | |
| | \------100------+ /----- EMT11380 [Aegilops tauschii] (59)
| | \-100+
| | \----- Traes_7DS_327FBC2CA.2 [Triticum aestivum] (88)
| |
| | /----- Brast07G055900.1.p [Brachypodium stacei] (28)
| \--------------100-------------+
| \----- Bradi1g47400.1.p [Brachypodium distachyon] (48)
|
\----------------------------------------- PH01000286G1200 [Phyllostachys heterocycla] (70)
Root part of tree:
/------------------------------------------------------------------- Oropetium_20150105_17318A [Oropetium thomaeum] (1)
|
| /------------------------------------------------ (160)
| |
| | /---------- Seita.4G050700.1.p [Setaria italica] (11)
| | /--------100-------+
| | | \---------- Sevir.4G048300.1.p [Setaria viridis] (37)
| /---99---+ |
| | | /---100--+ /---------- Pavir.4KG074200.1.p [Panicum virgatum] (12)
| | | | | /---78---+
| | | | | | \---------- Pavir.9NG802400.1.p [Panicum virgatum] (56)
| | | | \---100---+
| | \---100---+ \------------------- Pahal.F02357.1 [Panicum hallii] (23)
+----98---+ |
| | | /---------- GRMZM2G409974_P01 [Zea mays] (42)
| | \------------100------------+
| | \---------- Sobic.010G064700.1.p [Sorghum bicolor] (52)
| |
| | /---------- 462947625 [Eragrostis tef] (21)
| \----------------------100---------------------+
| \---------- 462880105 [Eragrostis tef] (78)
|
| /----------------------------- Zpz_sc01287.1.g00110.1.sm.mk [Zoysia pacifica] (15)
| |
| | /---------- Zjn_sc00049.1.g02050.1.sm.mk [Zoysia japonica] (39)
\------------------97-----------------+ /---100--+
| | \---------- Zmw_sc02383.1.g00140.1 [Zoysia matrella] (49)
\----99---+
\------------------- Zpz_sc02336.1.g00060.1.sm.mk [Zoysia pacifica] (87)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|