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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1939
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 118:
/-------------------------- LOC_Os10g41200.1 [Oryza sativa japonica] (2)
|
| /----- ORUFI10G19730.1 [Oryza rufipogon] (14)
| /-100+
| | \----- ONIVA10G21060.1 [Oryza nivara] (24)
| /-100+
/-88-+ | \---------- OGLUM10G18630.1 [Oryza glumaepatula] (67)
| | /--82-+
| | | \--------------- OPUNC10G16890.1 [Oryza punctata] (83)
| |-84-+
| | \--------------------- KN539135.1_FGP011 [Oryza longistaminata] (33)
/-99-+ |
| | \-------------------------- OMERI08G00440.1 [Oryza meridionalis] (40)
| |
| | /----- OBART10G18550.1 [Oryza barthii] (64)
/-66-+ \------------95-----------+
| | \----- ORGLA10G0136800.1 [Oryza glaberrima] (85)
| |
/-100+ \------------------------------------ LPERR10G14380.1 [Leersia perrieri] (9)
| |
| \----------------------------------------- OB10G25650.1 [Oryza brachyantha] (54)
|
| /----- TRIUR3_06499-P1 [Triticum urartu] (8)
| /-88-+
| | \----- Traes_1DL_8398893D8.1 [Triticum aestivum] (16)
| /-77-+
| | \---------- MLOC_10528.1 [Hordeum vulgare] (89)
| |
/--64-+ /-100-+--------------- Traes_1BL_B7F04D24D.1 [Triticum aestivum] (11)
| | | |
| | | \--------------- Traes_1AL_297FBF3A3.1 [Triticum aestivum] (30)
| |-----------100----------+
| | | /----- Bradi3g33400.2.p [Brachypodium distachyon] (47)
| | \------100------+
| | \----- Brast03G198600.1.p [Brachypodium stacei] (87)
| |
| |---------------------------------------------- PH01000841G0290 [Phyllostachys heterocycla] (17)
| |
| \---------------------------------------------- PH01000171G1160 [Phyllostachys heterocycla] (86)
|
| /----- Seita.9G321800.1.p [Setaria italica] (23)
/-100+ /-100+
| | | \----- Sevir.9G327500.1.p [Setaria viridis] (52)
| | |
| | /-88-+---------- Pahal.I04025.1 [Panicum hallii] (27)
| | | |
| | | \---------- Pavir.9NG469500.1.p [Panicum virgatum] (49)
| | |
| | | /----- GRMZM5G813892_P01 [Zea mays] (59)
| | /-100-+ /-60-+
/-99-+ | | | | \----- GRMZM2G034110_P01 [Zea mays] (81)
| | | | |-100+
| | | | | \---------- Sobic.001G297500.1.p [Sorghum bicolor] (72)
| | \--------------82--------------+ |
| | | \--------------- Pavir.9KG334200.1.p [Panicum virgatum] (80)
| | |
| | \--------------------- 462880639 [Eragrostis tef] (91)
| |
--61-+ \--------------------------------------------------------- Aco011681.1 [Ananas comosus] (3)
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| /----- GSMUA_Achr5P13550_001 [Musa acuminata] (12)
| /-100+
| | \----- GSMUA_Achr1P01650_001 [Musa acuminata] (78)
| /-100+
| | | /----- GSMUA_Achr5P15300_001 [Musa acuminata] (25)
| | \-82-+
\----------------------91----------------------+ \----- GSMUA_Achr4P26990_001 [Musa acuminata] (56)
|
\--------------- GSMUA_Achr2P01080_001 [Musa acuminata] (31)
Subtree rooted at node 159:
/----- Zmw_sc00646.1.g00240.1 [Zoysia matrella] (4)
/-100+
| \----- Zjn_sc00011.1.g06950.1.am.mkhc [Zoysia japonica] (26)
/-100+
| \---------- Zmw_sc01050.1.g00210.1 [Zoysia matrella] (39)
/-100-+
| \--------------- Zpz_sc00544.1.g00060.1.sm.mkhc [Zoysia pacifica] (61)
/-100+
| \--------------------- Oropetium_20150105_07354A [Oropetium thomaeum] (75)
|
| /--------------- Sobic.003G036600.1.p [Sorghum bicolor] (5)
/--------100--------+ |
| | |--------------- GRMZM2G400489_P01 [Zea mays] (34)
| | |
| \----100---+ /----- Seita.5G133800.1.p [Setaria italica] (46)
| | /-100+
| | | \----- Sevir.5G131800.1.p [Setaria viridis] (71)
| \-67-+
| | /----- Pahal.E04275.1 [Panicum hallii] (51)
| \-100+
| \----- Pavir.5KG055600.1.p [Panicum virgatum] (63)
|
| /----- OBART01G05710.1 [Oryza barthii] (7)
| /-100+
| | \----- ORGLA01G0053500.1 [Oryza glaberrima] (48)
| |
| |---------- BGIOSGA002232-PA [Oryza sativa indica] (28)
| |
| |---------- LOC_Os01g09280.1 [Oryza sativa japonica] (50)
| /-100+
| | |---------- OGLUM01G06250.1 [Oryza glumaepatula] (58)
/-100-+ | |
| | | |---------- ONIVA01G06510.1 [Oryza nivara] (73)
| | /--91-+ |
| | | | \---------- ORUFI01G06200.1 [Oryza rufipogon] (84)
| | | |
| | /-100+ \--------------- KN538755.1_FGP040 [Oryza longistaminata] (88)
| | | |
| | /-98-+ \--------------------- OMERI01G05960.1 [Oryza meridionalis] (74)
| | | |
| | /-100+ \-------------------------- OPUNC01G05570.1 [Oryza punctata] (35)
| | | |
| | /-100+ \------------------------------- LPERR01G05380.1 [Leersia perrieri] (43)
| | | |
| | | \------------------------------------ OB01G15640.1 [Oryza brachyantha] (20)
| | |
| | | /--------------------- MLOC_76271.1 [Hordeum vulgare] (13)
| | | |
| | | | /----- Traes_3AS_965E2F790.1 [Triticum aestivum] (19)
| | | | /-74-+
| | | /-97-+ | \----- Traes_3DS_61692C8F3.1 [Triticum aestivum] (22)
| \-72-+ | | /-100+
| | | | | \---------- TRIUR3_12855-P1 [Triticum urartu] (90)
/-71-+ | /-100+ \--99-+
| | | | | \--------------- EMT01615 [Aegilops tauschii] (36)
| | | | |
| | | /-100+ \-------------------------- TRAES3BF186800050CFD_t1 [Triticum aestivum] (77)
| | | | |
| | | | | /----- Brast01G356300.1.p [Brachypodium stacei] (53)
| | \-74-+ \-----------100-----------+
| | | \----- Bradi2g05590.1.p [Brachypodium distachyon] (55)
| | |
| | \------------------------------------ PH01002649G0270 [Phyllostachys heterocycla] (60)
| |
| | /----- PDK_30s725571g001 [Phoenix dactylifera] (6)
| | /-100+
| | | \----- XP_010911001.1 [Elaeis guineensis] (68)
| | /-100+
| | | | /----- PDK_30s830851g001 [Phoenix dactylifera] (32)
/-100+ | | \-98-+
| | | /--52-+ \----- XP_010925548.1 [Elaeis guineensis] (57)
| | | | |
| | | | \--------------- Aco009969.1 [Ananas comosus] (18)
| | | |
| | \--------------93--------------+ /----- GSMUA_AchrUn_randomP03500_001 [Musa acuminata] (15)
| | | /-100+
| | | | \----- GSMUA_Achr8P20150_001 [Musa acuminata] (62)
| | \----98----+
| | | /----- GSMUA_Achr6P14820_001 [Musa acuminata] (41)
--99-+ | \-100+
| | \----- GSMUA_Achr10P14040_001 [Musa acuminata] (44)
| |
| | /----- Zosma317g00250.1 [Zostera marina] (10)
| | /-92-+
| | | \----- Spipo21G0035200 [Spirodela polyrhiza] (29)
| \----------------------70----------------------+
| \---------- PEQU_38150 [Phalaenopsis equestris] (70)
|
\-------------------------------------------------------------- Zosma76g00240.1 [Zostera marina] (45)
Root part of tree:
/------------------------------------------------------------------- XP_010941063.1 [Elaeis guineensis] (1)
|
|------------------------------------------------------------------- PDK_30s917811g001 [Phoenix dactylifera] (42)
|
| /------------------- (118)
| |
| /-------------99-------------+ /---------- XP_010933630.1 [Elaeis guineensis] (21)
| | \---100--+
+ | \---------- PDK_30s831041g022 [Phoenix dactylifera] (65)
| |
| /---100--+ /-------------------------------------- (159)
| | | |
| | | | /---------- PEQU_18861 [Phalaenopsis equestris] (66)
| | | | /---100--+
| | \----74---+ | \---------- PEQU_01675 [Phalaenopsis equestris] (79)
| | | /----68---+
\---100---+ | | \------------------- Spipo1G0106700 [Spirodela polyrhiza] (76)
| \---63---+
| \----------------------------- Spipo17G0012800 [Spirodela polyrhiza] (82)
|
| /------------------- Aco026420.1 [Ananas comosus] (37)
| |
\------------------74-----------------+ /---------- XP_010934654.1 [Elaeis guineensis] (38)
\---100--+
\---------- PDK_30s1140161g002 [Phoenix dactylifera] (69)
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