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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1998
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 130:
/---------- Zmw_sc06343.1.g00050.1 [Zoysia matrella] (2)
|
/-100+ /----- Zpz_sc01720.1.g00010.1.sm.mkhc [Zoysia pacifica] (76)
| \-100+
/--99-+ \----- Zjn_sc00013.1.g09230.1.sm.mkhc [Zoysia japonica] (77)
| |
| \--------------- Oropetium_20150105_23643A [Oropetium thomaeum] (49)
|
/-76-+ /----- Zmw_sc02357.1.g00160.1 [Zoysia matrella] (40)
| | /-58-+
| | | \----- Zpz_sc01026.1.g00140.1.sm.mkhc [Zoysia pacifica] (43)
| \----89----+
/-76-+ \---------- Zjn_sc00014.1.g09110.1.am.mkhc [Zoysia japonica] (90)
| |
| | /----- 462951446 [Eragrostis tef] (29)
| \---------100--------+
| \----- 462846785 [Eragrostis tef] (51)
|
/---------76---------+ /----- Sobic.001G026500.1.p [Sorghum bicolor] (4)
| | /-67-+
| | | \----- GRMZM2G138421_P01 [Zea mays] (58)
| | /-100+
| | | \---------- GRMZM2G156756_P01 [Zea mays] (86)
| | |
| \------100------+ /----- Pahal.I01317.1 [Panicum hallii] (39)
| | /-100+
| | | \----- Pavir.J062800.1.p [Panicum virgatum] (63)
| \-100+
| | /----- Seita.9G022800.1.p [Setaria italica] (41)
| \-100+
| \----- Sevir.9G022400.1.p [Setaria viridis] (67)
|
| /---------- OGLUM03G39810.1 [Oryza glumaepatula] (5)
| |
| /-99-+ /----- ORGLA03G0367800.1 [Oryza glaberrima] (15)
| | \-100+
| | \----- OBART03G39900.1 [Oryza barthii] (25)
| /-100-+
| | | /---------- ONIVA03G41820.1 [Oryza nivara] (12)
| | | |
| | \-100+ /----- LOC_Os03g61760.1 [Oryza sativa japonica] (24)
| | | |
| /-98-+ \-100+----- BGIOSGA009504-PA [Oryza sativa indica] (48)
/-91-+ | | |
| | | | \----- ORUFI03G41710.1 [Oryza rufipogon] (53)
| | | |
| | /-100+ | /----- KN538869.1_FGP001 [Oryza longistaminata] (6)
| | | | \-------87------+
| | | | \----- AMDW01037510.1_FGP001 [Oryza longistaminata] (85)
| | | |
| | /-100+ \-------------------------- OMERI03G36740.1 [Oryza meridionalis] (83)
| | | |
| | | | /----- OPUNC03G37170.1 [Oryza punctata] (20)
| | /-99-+ \-----------100-----------+
| | | | \----- OPUNC03G37130.1 [Oryza punctata] (55)
| | | |
| | /-100+ \------------------------------------ OB03G47050.1 [Oryza brachyantha] (46)
| | | |
| | | \----------------------------------------- LPERR03G34030.1 [Leersia perrieri] (35)
| | |
| | | /----- Traes_4AL_5062917C4.1 [Triticum aestivum] (11)
| | | /-100+
/-70-+ | | | \----- TRIUR3_33729-P1 [Triticum urartu] (87)
| | | | /-95-+
| | | | | | /----- EMT28202 [Aegilops tauschii] (42)
| | | | | \-100+
| | | | /-100-+ \----- Traes_5DL_3CDCC5DFF.2 [Triticum aestivum] (52)
| | \-100-+ | |
| | | /-100+ \--------------- Traes_5BL_3503725F1.2 [Triticum aestivum] (56)
| | | | |
| | | | \--------------------- MLOC_4830.4 [Hordeum vulgare] (26)
| | |--------100--------+
--91-+ | | | /----- Brast02G372100.1.p [Brachypodium stacei] (72)
| | | \---------100--------+
| | | \----- Bradi1g02760.1.p [Brachypodium distachyon] (73)
| | |
| | | /----- PH01000040G1230 [Phyllostachys heterocycla] (33)
| | \-------------------100------------------+
| | \----- PH01000985G0610 [Phyllostachys heterocycla] (50)
| |
| \--------------------------------------------------------- Aco000696.1 [Ananas comosus] (82)
|
\-------------------------------------------------------------- Aco007331.1 [Ananas comosus] (59)
Subtree rooted at node 171:
/--------------------- (130)
|
| /----- XP_010941481.1 [Elaeis guineensis] (19)
/-------------------91-------------------+ /---100---+
| | | \----- PDK_30s1055851g002 [Phoenix dactylifera] (61)
| | |
| \--82-+ /---------- GSMUA_Achr2P01820_001 [Musa acuminata] (27)
| | |
| \-100+ /----- GSMUA_Achr3P24520_001 [Musa acuminata] (78)
| \-68-+
| \----- GSMUA_Achr5P27280_001 [Musa acuminata] (89)
|
| /----- OBART01G12250.2 [Oryza barthii] (3)
| |
| /-100+----- OBART01G12270.1 [Oryza barthii] (64)
| | |
| | \----- ORGLA01G0103500.1 [Oryza glaberrima] (88)
| |
| |---------- BGIOSGA003313-PA [Oryza sativa indica] (18)
| |
| /-100+---------- OGLUM01G13730.3 [Oryza glumaepatula] (47)
| | |
| | | /----- ORUFI01G13230.3 [Oryza rufipogon] (65)
| | |-100+
| /-100-+ | \----- LOC_Os01g18850.1 [Oryza sativa japonica] (74)
| | | |
| | | \---------- ONIVA01G14480.5 [Oryza nivara] (81)
| /-100+ |
| | | \--------------- KN538961.1_FGP003 [Oryza longistaminata] (91)
| | |
| /-100+ \--------------------- OPUNC01G11960.1 [Oryza punctata] (70)
| | |
| /------100-----+ \-------------------------- LPERR01G11190.1 [Leersia perrieri] (14)
| | |
| | \------------------------------- OB01G22010.1 [Oryza brachyantha] (9)
| |
| | /--------------------- MLOC_34539.4 [Hordeum vulgare] (7)
| | |
| | | /----- Traes_7AS_FB2A769B5.1 [Triticum aestivum] (23)
| | | /-100+
| | /-100+ | \----- TRIUR3_24010-P1 [Triticum urartu] (44)
| | | | /-100+
--85-+ | | | | \---------- Traes_7BS_7ACA0B10A.2 [Triticum aestivum] (80)
| | | \-100-+
| | | | /----- Traes_7DS_3880F0FD0.1 [Triticum aestivum] (32)
| | /---100---+ \---100---+
| | | | \----- EMT11716 [Aegilops tauschii] (92)
| | | |
| | | | /----- Brast01G287500.1.p [Brachypodium stacei] (8)
| | | \---------100--------+
| | | \----- Bradi2g11240.2.p [Brachypodium distachyon] (57)
| | |
| /-100-+ | /----- GRMZM2G133646_P01 [Zea mays] (10)
| | | | /-87-+
| | | | | \----- GRMZM2G081127_P01 [Zea mays] (22)
| | | | /------100------+
| | | | | \---------- Sobic.003G139900.1.p [Sorghum bicolor] (84)
| | | /-51-+ |
| | | | | | /----- Sevir.5G029400.1.p [Setaria viridis] (17)
| | | | | | /---100---+
| | | | | /-100+ | \----- Seita.5G030800.1.p [Setaria italica] (45)
| | | | | | | |
| | | | | | | /--99-+ /---------- Pahal.E03219.1 [Panicum hallii] (28)
| | | | | | | | | |
| | | | | | | | \-100+ /----- Pavir.5KG215300.1.p [Panicum virgatum] (54)
| | | | | | \-100+ \-100+
| | | | | | | \----- Pavir.5NG209600.1.p [Panicum virgatum] (66)
| | | | | | |
| | | | \-100+ \--------------------- Do001886.1 [Dichanthelium oligosanthes] (37)
| | | | |
| /-93-+ | | | /---------- 462963665 [Eragrostis tef] (16)
| | | \-53-+ | |
| | | | | /-100+ /----- 462930693 [Eragrostis tef] (60)
| | | | | | \-100+
| | | | | | \----- 462930695 [Eragrostis tef] (68)
| | | | | |
| | | | \------100------+ /----- Zmw_sc02098.1.g00070.1 [Zoysia matrella] (31)
| | | | | |
| | | | | /-100+----- Zmw_sc02474.1.g00060.1 [Zoysia matrella] (38)
| | | | | | |
| | | | \-97-+ \----- Zpz_sc01433.1.g00130.1.am.mkhc [Zoysia pacifica] (79)
\-84-+ | | |
| | | \---------- Oropetium_20150105_22941A [Oropetium thomaeum] (75)
| | |
| | \----------------------------------------- PH01000920G0420 [Phyllostachys heterocycla] (13)
| |
| | /----- Aco023516.1 [Ananas comosus] (21)
| \----------------------100---------------------+
| \----- Aco021992.1 [Ananas comosus] (71)
|
| /----- PDK_30s1173791g001 [Phoenix dactylifera] (34)
\-------------------------91------------------------+
\----- XP_010943698.1 [Elaeis guineensis] (69)
Root part of tree:
/------------------------------------------------------------------- Zosma5g00950.1 [Zostera marina] (1)
|
|------------------------------------------------------------------- Spipo3G0071500 [Spirodela polyrhiza] (36)
+
| /--------------------------------------------- (171)
| |
\----------94---------+ /---------------------- PEQU_16477 [Phalaenopsis equestris] (30)
\----------100---------+
\---------------------- PEQU_01300 [Phalaenopsis equestris] (62)
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