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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2005
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 156:
/---------- Zjn_sc00006.1.g03280.1.sm.mk [Zoysia japonica] (3)
|
|---------- Zmw_sc01908.1.g00010.1 [Zoysia matrella] (15)
/-61-+
| | /----- Zpz_sc00239.1.g00180.1.sm.mk [Zoysia pacifica] (34)
| \-100+
/-100-+ \----- Zmw_sc00968.1.g00170.1 [Zoysia matrella] (83)
| |
| | /----- Zpz_sc00239.1.g00170.1.am.mk [Zoysia pacifica] (10)
| \---100---+
| \----- Zmw_sc00968.1.g00160.1 [Zoysia matrella] (30)
/-85-+
| | /----- Zpz_sc00242.1.g00250.1.sm.mk [Zoysia pacifica] (61)
| | /-67-+
| | | \----- Zmw_sc01858.1.g00080.1 [Zoysia matrella] (72)
/-83-+ \----100---+
| | \---------- Zjn_sc00058.1.g02750.1.sm.mk [Zoysia japonica] (67)
| |
/-64-+ \-------------------------- Oropetium_20150105_21450A [Oropetium thomaeum] (31)
| |
| | /----- 462922698 [Eragrostis tef] (29)
| \-----------100-----------+
| \----- 462939026 [Eragrostis tef] (85)
|
/---------100--------+ /----- Pavir.7KG312700.1.p [Panicum virgatum] (20)
| | /-100+
| | | \----- Pahal.G00185.1 [Panicum hallii] (44)
| | /-100+
| | | | /----- Sevir.7G106300.1.p [Setaria viridis] (76)
| | | \-100+
| \---------100--------+ \----- Seita.7G098400.1.p [Setaria italica] (77)
| |
| | /----- Sobic.006G080500.1.p [Sorghum bicolor] (32)
| \---100---+
| \----- GRMZM2G147685_P01 [Zea mays] (88)
|
| /---------- Sobic.007G025200.1.p [Sorghum bicolor] (5)
| |
| /-100+ /----- Sobic.007G025300.1.p [Sorghum bicolor] (25)
| | \-100+
| | \----- GRMZM2G481280_P01 [Zea mays] (90)
| /---------95---------+
| | | /----- Sobic.004G171500.1.p [Sorghum bicolor] (45)
| | \---100---+
| | \----- Sobic.004G171600.1.p [Sorghum bicolor] (81)
| |
| | /---------- Pahal.A02070.1 [Panicum hallii] (6)
| | |
| | /-100+ /----- Pavir.1KG325000.1.p [Panicum virgatum] (58)
| | | \-100+
| | | \----- Pavir.1NG298900.1.p [Panicum virgatum] (64)
| | /-100-+
| /-100+ | | /----- Seita.1G188600.1.p [Setaria italica] (17)
| | | | \---100---+
| | | /-97-+ \----- Sevir.1G192500.1.p [Setaria viridis] (46)
| | | | |
| | | /-70-+ \--------------------- Do010032.1 [Dichanthelium oligosanthes] (9)
| | | | |
| | | | \-------------------------- Do027698.1 [Dichanthelium oligosanthes] (53)
| | | |
| | | | /----- Sevir.1G192300.1.p [Setaria viridis] (19)
| | | | /-100+
| | \-100+ | \----- Seita.1G188300.1.p [Setaria italica] (52)
| | | /----70----+
| | | | | /----- Sevir.1G192200.1.p [Setaria viridis] (41)
| | | | \-100+
| | | | \----- Seita.1G188200.1.p [Setaria italica] (55)
| | | |
| /-98-+ \---100---+ /----- Pavir.1NG298700.1.p [Panicum virgatum] (66)
/-95-+ | | | /-100+
| | | | | | \----- Pavir.1NG298500.1.p [Panicum virgatum] (73)
| | | | | /-70-+
| | | | | | \---------- Pahal.A02069.1 [Panicum hallii] (80)
| | | | \-100-+
| | | | | /----- Pavir.1KG324900.1.p [Panicum virgatum] (69)
| | | | \---100---+
| | | | \----- Pavir.1KG324800.1.p [Panicum virgatum] (70)
| | | |
| | | | /-------------------------- Oropetium_20150105_11404A [Oropetium thomaeum] (13)
| | | | |
| | | | | /----- Zmw_sc00318.1.g00130.1 [Zoysia matrella] (33)
| | | | | /-100+
| | | | | | \----- Zjn_sc00020.1.g01310.1.am.mk [Zoysia japonica] (75)
| | | \------100-----+ /-88-+
| | | | | \---------- Zpz_sc02539.1.g00100.1.am.mk [Zoysia pacifica] (36)
| | | | /-100-+
| | | | | \--------------- Zmw_sc01421.1.g00190.1 [Zoysia matrella] (49)
| | | \-89-+
| | | \--------------------- Oropetium_20150105_11403A [Oropetium thomaeum] (51)
| | |
| | /--99-+ /---------- Brast04G176700.1.p [Brachypodium stacei] (11)
| | | | |
| | | | /-100+ /----- Bradi3g45370.2.p [Brachypodium distachyon] (47)
| | | | | \-100+
| | | | | \----- Bradi3g45360.2.p [Brachypodium distachyon] (59)
| | | | /----100---+
| | | | | | /----- Bradi3g45365.1.p [Brachypodium distachyon] (82)
| | | | | \---100---+
| | | | | \----- Brast04G176600.1.p [Brachypodium stacei] (86)
| | | | |
| | | | | /----- Traes_6BS_C53202201.1 [Triticum aestivum] (23)
| | | | /-99-+ /-84-+
| | | | | | | \----- TRIUR3_10631-P1 [Triticum urartu] (39)
| | | | | | /-99-+
| | | | | | | \---------- EMT20279 [Aegilops tauschii] (50)
--75-+ | | | | | /--99-+
| | | | | | | \--------------- MLOC_44566.1 [Hordeum vulgare] (26)
| | | | | \-98-+
| | | | | \--------------------- EMT06122 [Aegilops tauschii] (43)
| | | | |
| | | | | /----- OB02G27530.1 [Oryza brachyantha] (16)
| | | | | /----68---+
| | | \------91------+ | \----- OPUNC02G17910.1 [Oryza punctata] (28)
| \-75-+ | |
| | | | /----- ORUFI02G21070.1 [Oryza rufipogon] (21)
| | | | |
| | | | /-100+----- LOC_Os02g34320.1 [Oryza sativa japonica] (48)
| | | | | |
| | | /-100-+-51-+ \----- BGIOSGA008398-PA [Oryza sativa indica] (60)
| | | | | |
| | | | | \---------- OGLUM02G20210.1 [Oryza glumaepatula] (65)
| | | | |
| | \---100---+ |--------------- OBART02G19940.1 [Oryza barthii] (24)
| | | |
| | | \--------------- ORGLA02G0170900.1 [Oryza glaberrima] (40)
| | |
| | \--------------------- LPERR02G15950.1 [Leersia perrieri] (79)
| |
| | /----- PDK_30s737611g001 [Phoenix dactylifera] (8)
| | /---100---+
| | | \----- XP_010930934.1 [Elaeis guineensis] (91)
| | |
| | /-100-+ /---------- GSMUA_Achr9P08780_001 [Musa acuminata] (18)
| | | | |
| | | \-99-+ /----- Aco003204.1 [Ananas comosus] (56)
| \--------------100-------------+ \-83-+
| | \----- Spipo4G0113200 [Spirodela polyrhiza] (62)
| |
| \--------------------- Zosma2g01070.1 [Zostera marina] (89)
|
\-------------------------------------------------------------- OB04G19940.1 [Oryza brachyantha] (42)
Subtree rooted at node 169:
/--------------------------------------------------------- ORGLA04G0098500.1 [Oryza glaberrima] (2)
|
| /-------------------------- (156)
| |
| | /----- LPERR04G09540.1 [Leersia perrieri] (12)
| | /-89-+
| | | \----- LPERR04G09530.1 [Leersia perrieri] (27)
| /-85-+ /-100+
| | | | \---------- LPERR04G09510.1 [Leersia perrieri] (78)
| | | /-100-+
| | | | \--------------- OB04G19930.1 [Oryza brachyantha] (37)
| /-61-+ \-100+
| | | \--------------------- KN539428.1_FGP004 [Oryza longistaminata] (38)
| | |
/-74-+ /-73-+ \------------------------------- LPERR04G09550.1 [Leersia perrieri] (7)
| | | |
| | /-83-+ \------------------------------------ OPUNC04G10810.1 [Oryza punctata] (14)
| | | |
| | /--71-+ \----------------------------------------- OMERI04G11480.1 [Oryza meridionalis] (71)
| | | |
| |-66-+ \---------------------------------------------- KN539428.1_FGP006 [Oryza longistaminata] (4)
| | |
--55-+ | \---------------------------------------------------- BGIOSGA016427-PA [Oryza sativa indica] (68)
| |
| | /----- ONIVA04G11000.1 [Oryza nivara] (22)
| |------------------------100------------------------+
| | \----- OBART04G12880.1 [Oryza barthii] (57)
| |
| \--------------------------------------------------------- LOC_Os04g35010.1 [Oryza sativa japonica] (35)
|
\-------------------------------------------------------------- OGLUM04G12510.1 [Oryza glumaepatula] (74)
Root part of tree:
/------------------------------------------------------------------- ORGLA04G0098400.1 [Oryza glaberrima] (1)
|
|------------------------------------------------------------------- OBART04G12870.1 [Oryza barthii] (84)
|
+ /---------------------- (169)
| /----------82----------+
| | \---------------------- ORUFI04G14020.1 [Oryza rufipogon] (63)
\----------92---------+
| /---------------------- BGIOSGA016426-PA [Oryza sativa indica] (54)
\----------55----------+
\---------------------- ONIVA04G10990.1 [Oryza nivara] (87)
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