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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2012
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 144:
/--------------- Traes_6BS_BD894AD26.1 [Triticum aestivum] (2)
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| /----- Traes_6DS_F95C12EBB.1 [Triticum aestivum] (9)
/--98-+ /-100+
| | | \----- EMT32630 [Aegilops tauschii] (51)
| \-97-+
| | /----- Traes_6AS_10D92215D.2 [Triticum aestivum] (19)
/-100+ \-100+
| | \----- TRIUR3_28948-P1 [Triticum urartu] (72)
| |
/-100+ \--------------------- MLOC_66152.2 [Hordeum vulgare] (78)
| |
| | /----- Brast04G290300.1.p [Brachypodium stacei] (63)
| \---------100--------+
| \----- Bradi3g04920.1.p [Brachypodium distachyon] (73)
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| /----- PH01000093G0670 [Phyllostachys heterocycla] (4)
|-----------100-----------+
| \----- PH01000227G0020 [Phyllostachys heterocycla] (34)
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| /----- Pavir.1KG067400.1.p [Panicum virgatum] (6)
| /-97-+
| | \----- Pavir.1NG060500.1.p [Panicum virgatum] (62)
| /-100+
/------51------+ | | /----- Pahal.J01514.1 [Panicum hallii] (20)
| | | \-100+
| | /-100-+ \----- Pahal.A00415.1 [Panicum hallii] (37)
| | | |
| | | | /----- Sevir.1G075700.1.p [Setaria viridis] (50)
| | | \---100---+
| | /-100+ \----- Seita.1G077200.1.p [Setaria italica] (54)
| | | |
| | | | /----- GRMZM2G028980_P01 [Zea mays] (8)
| | | \------100------+
| | | \----- Sobic.004G051900.1.p [Sorghum bicolor] (58)
| | |
| | | /----- Zjn_sc00045.1.g03490.1.am.mkhc [Zoysia japonica] (13)
| \-100+ /-100+
| | | \----- Zmw_sc03225.1.g00090.1 [Zoysia matrella] (76)
| | /-65-+
| | | \---------- 462865345 [Eragrostis tef] (29)
| | /--65-+
| | | \--------------- 462954133 [Eragrostis tef] (65)
| \-100+
| \--------------------- Oropetium_20150105_14416A [Oropetium thomaeum] (25)
/-100-+
| | /--------------- ORGLA02G0045800.1 [Oryza glaberrima] (3)
| | |
| | | /----- LOC_Os02g06910.1 [Oryza sativa japonica] (7)
| | | |
| | | /-100+----- ORUFI02G05060.1 [Oryza rufipogon] (14)
| | | | |
| | /-100-+-100+ \----- BGIOSGA007604-PA [Oryza sativa indica] (79)
| | | | |
| | | | \---------- ONIVA02G05150.1 [Oryza nivara] (68)
| | | |
| | /-70-+ |--------------- OGLUM02G04770.1 [Oryza glumaepatula] (52)
| | | | |
| | | | \--------------- OBART02G04960.1 [Oryza barthii] (81)
| | /-100+ |
| | | | \--------------------- KN539680.1_FGP001 [Oryza longistaminata] (21)
| | | |
| | /-100+ \-------------------------- OMERI02G05780.1 [Oryza meridionalis] (43)
| | | |
| | /-91-+ \------------------------------- OPUNC02G04120.1 [Oryza punctata] (83)
| | | |
| \-100+ \------------------------------------ OB02G14210.1 [Oryza brachyantha] (70)
| |
| \----------------------------------------- LPERR02G04280.1 [Leersia perrieri] (12)
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| /---------- ORUFI06G26570.1 [Oryza rufipogon] (5)
| |
| |---------- KN539163.1_FGP009 [Oryza longistaminata] (41)
/-96-+ |
| | |---------- LOC_Os06g46410.1 [Oryza sativa japonica] (55)
| | |
| | /-100+---------- OBART06G24660.1 [Oryza barthii] (61)
| | | |
| | | | /----- BGIOSGA020682-PA [Oryza sativa indica] (66)
| | | |-100+
| | /--97-+ | \----- ONIVA02G35510.1 [Oryza nivara] (71)
| | | | |
| | | | \---------- OGLUM06G26000.1 [Oryza glumaepatula] (82)
| | /-100+ |
| | | | \--------------- OMERI06G24880.1 [Oryza meridionalis] (45)
| | | |
| | /-92-+ \--------------------- OPUNC06G22430.1 [Oryza punctata] (60)
| | | |
| | /---100---+ \-------------------------- OB06G32420.1 [Oryza brachyantha] (64)
| | | |
| | | \------------------------------- LPERR06G20540.1 [Leersia perrieri] (30)
| | |
| | | /----- Brast07G208400.1.p [Brachypodium stacei] (10)
| | | /---------100--------+
| | | | \----- Bradi1g32547.1.p [Brachypodium distachyon] (33)
| | | |
| | | | /---------- Traes_7BL_66296695F.1 [Triticum aestivum] (15)
| | | | |
| | | /-100+ /-100+ /----- TRIUR3_32597-P1 [Triticum urartu] (36)
| | | | | | \-95-+
| | | | | /-100-+ \----- Traes_7AL_1415D04BF.1 [Triticum aestivum] (40)
| \----99----+ | | | |
| | | \-100+ \--------------- Traes_7DL_C89614A4D.1 [Triticum aestivum] (46)
/-92-+ | /-98-+ |
| | | | | \--------------------- MLOC_58330.2 [Hordeum vulgare] (18)
| | | | |
| | | | | /----- PH01000483G0220 [Phyllostachys heterocycla] (22)
| | | | \-----------100-----------+
| | | | \----- PH01001555G0390 [Phyllostachys heterocycla] (28)
| | | |
| | | | /----- Pavir.4NG303000.1.p [Panicum virgatum] (11)
| | | | /-100+
| | | | | \----- Pavir.4KG408000.1.p [Panicum virgatum] (85)
| | | | /-100+
| | \-61-+ | \---------- Pahal.D00507.1 [Panicum hallii] (42)
| | | /-100-+
| | | | | /----- Sevir.4G275100.1.p [Setaria viridis] (17)
| | | | \---100---+
| | | /-100+ \----- Seita.4G262300.1.p [Setaria italica] (47)
--92-+ | | | |
| | | | | /----- GRMZM2G035405_P02 [Zea mays] (23)
| | | | \------100------+
| | | | \----- Sobic.010G229000.1.p [Sorghum bicolor] (56)
| | | |
| | \---100---+ /----- 462860570 [Eragrostis tef] (26)
| | | /-100+
| | | | \----- 462860572 [Eragrostis tef] (39)
| | | /-100+
| | | | \---------- 462958810 [Eragrostis tef] (38)
| | \----100---+
| | \--------------- Oropetium_20150105_15589A [Oropetium thomaeum] (31)
| |
| \--------------------------------------------------------- GSMUA_Achr1P08230_001 [Musa acuminata] (77)
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\-------------------------------------------------------------- Aco008426.1 [Ananas comosus] (59)
Root part of tree:
/------------------------------------------------------------------- GSMUA_Achr6P19850_001 [Musa acuminata] (1)
|
| /-------- GSMUA_Achr5P00590_001 [Musa acuminata] (24)
|----------------------------100---------------------------+
| \-------- GSMUA_Achr11P18520_001 [Musa acuminata] (32)
|
| /-------- (144)
| /--------------------92-------------------+
| | \-------- Aco014831.1 [Ananas comosus] (35)
| |
| | /----------------- GSMUA_Achr5P02450_001 [Musa acuminata] (27)
| | |
+ | /--100--+ /-------- PDK_30s840681g002 [Phoenix dactylifera] (53)
| | | \---92---+
| | | \-------- XP_010923656.1 [Elaeis guineensis] (74)
| /---76---+ /---66--+
| | | | | /-------- Spipo13G0044400 [Spirodela polyrhiza] (44)
| | | | \-------69-------+
| | | /---69---+ \-------- Zosma39g00250.1 [Zostera marina] (49)
| | | | |
| | | | \--------------------------------- PEQU_03892 [Phalaenopsis equestris] (69)
| | | |
| | | |------------------------------------------ PDK_30s1185041g002 [Phoenix dactylifera] (48)
| | \---69--+
\---97--+ | /-------- PDK_30s841991g001 [Phoenix dactylifera] (57)
| | /---100--+
| | | \-------- XP_010908734.1 [Elaeis guineensis] (75)
| \-----------64-----------+
| \----------------- XP_010941526.1 [Elaeis guineensis] (67)
|
| /-------- GSMUA_Achr5P26580_001 [Musa acuminata] (16)
| /---100--+
| | \-------- GSMUA_Achr11P25770_001 [Musa acuminata] (84)
\--------------------99-------------------+
\----------------- GSMUA_Achr3P23290_001 [Musa acuminata] (80)
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