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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2013
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/------------------------------------------------------------------- PDK_30s1058241g001 [Phoenix dactylifera] (1)
|
|------------------------------------------------------------------- XP_010933179.1 [Elaeis guineensis] (81)
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| /---------- Zpz_sc00418.1.g00380.1.sm.mk [Zoysia pacifica] (2)
| |
| /-100+ /----- Zmw_sc02266.1.g00080.1 [Zoysia matrella] (29)
| | \-100+
| | \----- Zjn_sc00007.1.g00390.1.sm.mk [Zoysia japonica] (43)
| |
| /--93-+ /----- Zjn_sc00066.1.g00390.1.am.mk [Zoysia japonica] (42)
| | | /-100+
| | | | \----- Zmw_sc04154.1.g00020.1 [Zoysia matrella] (48)
| | \-100+
| /-88-+ | /----- Zmw_sc04540.1.g00030.1 [Zoysia matrella] (72)
| | | \-100+
| | | \----- Zpz_sc00911.1.g00260.1.sm.mk [Zoysia pacifica] (75)
| | |
| | \--------------------- Oropetium_20150105_04704A [Oropetium thomaeum] (58)
| |
| /-70-+ /----- Pavir.1KG549600.1.p [Panicum virgatum] (25)
| | | /-93-+
| | | | \----- Pavir.1NG550900.1.p [Panicum virgatum] (82)
| | | /-100+
| | | | \---------- Pahal.A03950.1 [Panicum hallii] (51)
| | \----100---+
| | | /----- Sevir.1G379400.1.p [Setaria viridis] (41)
| | \---100---+
| | \----- Seita.1G372800.1.p [Setaria italica] (49)
| |
| | /---------- Sobic.004G351700.1.p [Sorghum bicolor] (4)
| | |
| |---------100--------+ /----- GRMZM2G038291_P01 [Zea mays] (18)
| | \-100+
| | \----- GRMZM2G140033_P01 [Zea mays] (26)
| |
| | /----- ONIVA02G40650.1 [Oryza nivara] (8)
| | |
| /-55-+ |----- LOC_Os02g57790.1 [Oryza sativa japonica] (24)
| | | |
| | | |----- ORGLA02G0331100.1 [Oryza glaberrima] (35)
| | | /-100+
| | | | |----- BGIOSGA005334-PA [Oryza sativa indica] (52)
| | | | |
| | | | |----- OGLUM02G39020.1 [Oryza glumaepatula] (60)
| | | /-72-+ |
| | | | | \----- ORUFI02G39400.1 [Oryza rufipogon] (73)
| | | | |
| | | /--97-+ \---------- OPUNC02G35060.1 [Oryza punctata] (77)
| | | | |
| | | /-100+ \--------------- OMERI02G35680.1 [Oryza meridionalis] (47)
| /-97-+ | | |
| | | | | \--------------------- LPERR02G31310.1 [Leersia perrieri] (17)
| | | | |
| | | | | /----- Traes_6DL_88DFCF552.1 [Triticum aestivum] (9)
| | | | |---------100--------+
| | | \-50-+ \----- Traes_6AL_3DEF1B023.1 [Triticum aestivum] (19)
| | | |
| | | |-------------------------- Brast04G053900.1.p [Brachypodium stacei] (13)
| | | |
| | | | /----- PH01000021G0290 [Phyllostachys heterocycla] (39)
| | | \---------100--------+
| /-91-+ | \----- PH01000140G0830 [Phyllostachys heterocycla] (55)
| | | |
| | | \------------------------------------ MLOC_29808.1 [Hordeum vulgare] (85)
| | |
| | | /----- Sevir.4G304100.1.p [Setaria viridis] (6)
| | | /-100+
| | | | \----- Seita.4G291500.1.p [Setaria italica] (69)
| | | /-100+
| | | | | /----- Pahal.D00284.1 [Panicum hallii] (20)
| | | | \-100+
| | \-----------100-----------+ \----- Pavir.5NG224600.1.p [Panicum virgatum] (78)
| | |
| | | /----- GRMZM2G307402_P01 [Zea mays] (27)
| | \---100---+
+ | \----- Sobic.010G279600.1.p [Sorghum bicolor] (40)
| |
| | /---------- ONIVA04G01780.1 [Oryza nivara] (3)
| | |
| | |---------- BGIOSGA015871-PA [Oryza sativa indica] (31)
| | /-69-+
| | | | /----- ORGLA04G0015300.1 [Oryza glaberrima] (33)
| | | \-94-+
| /--74-+ | \----- OBART04G02090.1 [Oryza barthii] (59)
| | | |
| | | /--59-+ /----- OGLUM08G21100.1 [Oryza glumaepatula] (16)
| | | | |----97---+
| | | | | \----- OPUNC04G02120.1 [Oryza punctata] (28)
| | | | |
| | | /-86-+ | /----- ORUFI04G02810.1 [Oryza rufipogon] (23)
| | | | | \---100---+
| | | | | \----- LOC_Os04g08060.1 [Oryza sativa japonica] (37)
| | | /-100+ |
| | | | | \--------------------- OMERI04G02090.1 [Oryza meridionalis] (68)
| | | | |
| | | | \-------------------------- LPERR04G01360.1 [Leersia perrieri] (62)
| | | /-94-+
| | | | | /---------- Traes_2BS_705DDDDC8.2 [Triticum aestivum] (10)
| | | | | |
| | | | \---------98---------+ /----- Bradi5g00530.2.p [Brachypodium distachyon] (38)
| | | /-97-+ \-100+
| | | | | \----- Brast09G002000.1.p [Brachypodium stacei] (84)
| /-60-+ | | |
| | | | | | /----- PH01001035G0240 [Phyllostachys heterocycla] (57)
| | | | | \--------------100-------------+
| | | \-100+ \----- PH01001442G0040 [Phyllostachys heterocycla] (61)
| | | |
| | | | /--------------- Oropetium_20150105_25655A [Oropetium thomaeum] (15)
| | | | |
| | | | | /----- Zjn_sc00057.1.g00250.1.am.mk [Zoysia japonica] (34)
| | | \-----------100-----------+ /-100+
| | | | | \----- Zmw_sc00714.1.g00130.1 [Zoysia matrella] (53)
| | | \-100+
| | | \---------- Zpz_sc01679.1.g00020.1.am.mk [Zoysia pacifica] (66)
| | |
| | | /----- Aco008896.1 [Ananas comosus] (12)
| | | /-98-+
| | | | \----- Aco010240.1 [Ananas comosus] (32)
| | | /-55-+
| | | | | /----- Aco009157.1 [Ananas comosus] (76)
| | | | \-100+
| | \-----------------72-----------------+ \----- Aco021560.1 [Ananas comosus] (80)
| | |
| | \--------------- PEQU_05713 [Phalaenopsis equestris] (44)
| |
| | /----- PEQU_14971 [Phalaenopsis equestris] (5)
| | /-100+
| | | \----- PEQU_14970 [Phalaenopsis equestris] (36)
| | /-54-+
| | | \---------- PEQU_14967 [Phalaenopsis equestris] (65)
| | /-100-+
| | | \--------------- PEQU_14966 [Phalaenopsis equestris] (64)
| |-----------------87----------------+
| | \--------------------- PEQU_17487 [Phalaenopsis equestris] (50)
| /-85-+
| | |--------------------------------------------------------- GSMUA_Achr1P01260_001 [Musa acuminata] (7)
| | |
| | | /----- GSMUA_AchrUn_randomP07580_001 [Musa acuminata] (11)
| | | /-63-+
| | | | \----- GSMUA_Achr1P06720_001 [Musa acuminata] (79)
| | | /-87-+
| | | | \---------- GSMUA_Achr10P06730_001 [Musa acuminata] (30)
| | | |
| | | | /----- XP_010940535.1 [Elaeis guineensis] (22)
| | | | /-100+
| | | | | \----- PDK_30s669462g005 [Phoenix dactylifera] (63)
| | |--------------------70-------------------+-100+
| | | | | /----- PDK_30s758801g007 [Phoenix dactylifera] (67)
| | | | \-97-+
| | | | \----- XP_010935821.1 [Elaeis guineensis] (71)
| | | |
\-82-+ | \--------------- Spipo11G0058400 [Spirodela polyrhiza] (45)
| |
| |--------------------------------------------------------- PEQU_20819 [Phalaenopsis equestris] (14)
| |
| | /----- GSMUA_Achr1P03310_001 [Musa acuminata] (21)
| |-------------------------76------------------------+
| | \----- Zosma31g00150.1 [Zostera marina] (54)
| |
| | /----- GSMUA_Achr11P02250_001 [Musa acuminata] (46)
| | /-94-+
| | | \----- GSMUA_Achr8P12900_001 [Musa acuminata] (83)
| |----------------------91----------------------+
| | \---------- GSMUA_Achr11P21920_001 [Musa acuminata] (74)
| |
| \--------------------------------------------------------- Zosma37g01300.1 [Zostera marina] (70)
|
\-------------------------------------------------------------- XP_010910785.1 [Elaeis guineensis] (56)
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