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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGMP2094
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 162:
/--------------- KN541190.1_FGP001 [Oryza longistaminata] (3)
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| /---------- OGLUM05G00490.1 [Oryza glumaepatula] (4)
| |
| |---------- ONIVA05G00420.1 [Oryza nivara] (21)
/--72-+ |
| | | /----- OBART05G00460.1 [Oryza barthii] (29)
| | |-99-+
| | | \----- OBART05G00440.1 [Oryza barthii] (73)
| | |
| \-70-+---------- ORGLA05G0004600.1 [Oryza glaberrima] (42)
| |
| |---------- OMERI05G00560.1 [Oryza meridionalis] (59)
/-51-+ |
| | |---------- LOC_Os05g01550.1 [Oryza sativa japonica] (60)
| | |
| | |---------- ORUFI05G00440.1 [Oryza rufipogon] (67)
| | |
/-91-+ | \---------- BGIOSGA018967-PA [Oryza sativa indica] (74)
| | |
| | \--------------------- BGIOSGA018968-PA [Oryza sativa indica] (85)
| |
/-100+ \-------------------------- OPUNC05G00390.1 [Oryza punctata] (95)
| |
| | /----- LPERR05G00430.1 [Leersia perrieri] (55)
/-61-+ \------------57-----------+
| | \----- OB05G10490.1 [Oryza brachyantha] (88)
| |
| \------------------------------------ PH01000918G0240 [Phyllostachys heterocycla] (47)
|
|----------------------------------------- PH01000775G0560 [Phyllostachys heterocycla] (5)
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| /----- Sobic.009G006900.1.p [Sorghum bicolor] (9)
| /------100------+
| | \----- GRMZM2G175000_P01 [Zea mays] (92)
| |
| | /----- Pavir.J121700.1.p [Panicum virgatum] (15)
| | /-55-+
| /------100-----+ | \----- Pahal.C01019.1 [Panicum hallii] (69)
| | | /-100+
| | | | | /----- Pavir.3KG096800.1.p [Panicum virgatum] (39)
| | | | \-88-+
| | | | \----- Pavir.3NG036100.1.p [Panicum virgatum] (94)
| | \-100-+
| | | /----- Sevir.3G069500.1.p [Setaria viridis] (20)
| | | /-100+
| | | | \----- Seita.3G068200.1.p [Setaria italica] (52)
| | \-95-+
| | \---------- Do002016.1 [Dichanthelium oligosanthes] (80)
| |
|-98-+ /--------------- Zpz_sc04632.1.g00030.1.sm.mk [Zoysia pacifica] (19)
| | |
| | | /----- Zpz_sc03258.1.g00060.1.sm.mkhc [Zoysia pacifica] (23)
| | /-100-+ /-100+
/-100+ | | | | \----- Zmw_sc01664.1.g00020.1 [Zoysia matrella] (90)
| | | | \-100+
| | | /-100+ \---------- Zjn_sc00115.1.g00300.1.sm.mkhc [Zoysia japonica] (97)
| | | | |
| | | | | /----- Zjn_sc00115.1.g00280.1.sm.mkhc [Zoysia japonica] (27)
| | | /-99-+ \-------73------+
| | | | | \----- Zpz_sc04632.1.g00010.1.sm.mk [Zoysia pacifica] (35)
| | | | |
| | \-98-+ \-------------------------- Oropetium_20150105_15269A [Oropetium thomaeum] (61)
| | |
| | | /----- 462875379 [Eragrostis tef] (65)
| | \-----------100-----------+
| | \----- 462934239 [Eragrostis tef] (89)
| |
| | /--------------- Traes_1DS_0BBC3B5D3.1 [Triticum aestivum] (28)
| | |
| | | /----- Traes_1AS_21ACC7F67.1 [Triticum aestivum] (34)
/-100-+ | | /-97-+
| | | /--66-+ | \----- TRIUR3_01525-P1 [Triticum urartu] (98)
| | | | |-94-+
| | | | | \---------- EMT11934 [Aegilops tauschii] (50)
| | | /-84-+ |
| | | | | \--------------- Traes_1AS_DC6B18EE0.1 [Triticum aestivum] (45)
| | | | |
| | | /-63-+ \--------------------- Traes_1BS_0DEFAACB9.1 [Triticum aestivum] (82)
| | | | |
| | | /-50-+ \-------------------------- MLOC_37432.1 [Hordeum vulgare] (44)
| | | | |
| | | | \------------------------------- PH01002420G0120 [Phyllostachys heterocycla] (64)
| | \-51-+
| | | /----- Bradi2g39700.1.p [Brachypodium distachyon] (38)
| | \--------------100-------------+
| | \----- Brast08G245500.1.p [Brachypodium stacei] (49)
/-60-+ |
| | \---------------------------------------------- Spipo9G0043100 [Spirodela polyrhiza] (22)
| |
| | /--------------- PEQU_06830 [Phalaenopsis equestris] (6)
| | |
| | | /----- GSMUA_Achr8P16190_001 [Musa acuminata] (7)
| | /--90-+ /-99-+
| | | | | \----- GSMUA_Achr10P16000_001 [Musa acuminata] (41)
| | | \-95-+
| | | \---------- GSMUA_Achr6P24250_001 [Musa acuminata] (81)
| | /-97-+
/-69-+ | | | /----- XP_010912518.1 [Elaeis guineensis] (48)
| | | | | /-100+
| | | | | | \----- PDK_30s1024561g013 [Phoenix dactylifera] (75)
| | | | \----100---+
| | \------------97-----------+ | /----- XP_010930779.1 [Elaeis guineensis] (84)
| | | \-100+
--100+ | | \----- PDK_30s671761g003 [Phoenix dactylifera] (99)
| | |
| | \-------------------------- Aco013597.1 [Ananas comosus] (72)
| |
| \--------------------------------------------------------- Zosma6g00010.1 [Zostera marina] (56)
|
\-------------------------------------------------------------- Aco007900.1 [Ananas comosus] (66)
Subtree rooted at node 176:
/----- Zpz_sc00263.1.g00060.1.sm.mkhc [Zoysia pacifica] (2)
|
/-97-+----- Zmw_sc00618.1.g00390.1 [Zoysia matrella] (12)
| |
/-100+ \----- Zmw_sc02236.1.g00060.1 [Zoysia matrella] (63)
| |
| \---------- Zjn_sc00020.1.g01120.1.sm.mkhc [Zoysia japonica] (70)
|
/-100-+ /----- Zmw_sc04065.1.g00100.1 [Zoysia matrella] (18)
| | /-100+
| | | \----- Zpz_sc00197.1.g00460.1.sm.mkhc [Zoysia pacifica] (68)
| | |
/-100+ \-100+---------- Zjn_sc00017.1.g03460.1.sm.mkhc [Zoysia japonica] (30)
| | |
| | \---------- Zpz_sc00045.1.g00330.1.sm.mkhc [Zoysia pacifica] (96)
| |
/-100+ \--------------------- Oropetium_20150105_11424A [Oropetium thomaeum] (86)
| |
| | /----- 462896455 [Eragrostis tef] (37)
| \---------100--------+
| \----- 462854956 [Eragrostis tef] (87)
|
| /----- Seita.1G190700.1.p [Setaria italica] (11)
| /---100---+
| | \----- Sevir.1G194700.1.p [Setaria viridis] (93)
/-100+ |
| | /--64-+ /----- Pavir.1KG332700.1.p [Panicum virgatum] (32)
| | | | /-84-+
| | | | | \----- Pavir.1NG286300.1.p [Panicum virgatum] (40)
| | /-100+ \-100+
| | | | \---------- Pahal.A02093.1 [Panicum hallii] (79)
| | | |
| | | \--------------------- Do021170.1 [Dichanthelium oligosanthes] (26)
/-78-+ \-100+
| | | /---------- GRMZM5G885700_P02 [Zea mays] (13)
| | | |
| | \------100------+ /----- GRMZM2G140016_P01 [Zea mays] (58)
| | \-50-+
| | \----- Sobic.004G174400.1.p [Sorghum bicolor] (77)
| |
| \------------------------------------ PH01002654G0080 [Phyllostachys heterocycla] (33)
/-100+
| | /------------------------------------ (162)
| | |
| | | /----- Brast04G173700.1.p [Brachypodium stacei] (8)
| | | /-----------100-----------+
| | | | \----- Bradi3g45590.1.p [Brachypodium distachyon] (53)
| | | |
| \-64-+ | /----- Traes_6AL_BA6465E82.1 [Triticum aestivum] (14)
| | | |
| | | /-100+----- Traes_6AL_BA6465E822.1 [Triticum aestivum] (46)
| | | | |
| | | /-100+ \----- Traes_6AL_BA6465E821.1 [Triticum aestivum] (78)
/--99-+ \-100+ | |
| | | | \---------- TRIUR3_30934-P1 [Triticum urartu] (17)
| | | /--87-+
| | | | | /----- Traes_6BL_CC009B78A.2 [Triticum aestivum] (43)
| | | | \----96---+
| | | /-84-+ \----- MLOC_11665.6 [Hordeum vulgare] (62)
| | | | |
/-100+ | \-100+ \--------------------- EMT32884 [Aegilops tauschii] (54)
| | | |
| | | \-------------------------- Traes_6DL_F47CFC6D9.1 [Triticum aestivum] (83)
| | |
/-100+ | \---------------------------------------------- LPERR02G16200.1 [Leersia perrieri] (16)
| | |
| | \---------------------------------------------------- OB02G27740.1 [Oryza brachyantha] (76)
--97-+ |
| \--------------------------------------------------------- OPUNC02G18120.1 [Oryza punctata] (91)
|
\-------------------------------------------------------------- OMERI02G19990.1 [Oryza meridionalis] (71)
Root part of tree:
/------------------------------------------------------------------- LOC_Os02g34680.1 [Oryza sativa japonica] (1)
|
|------------------------------------------------------------------- ORUFI02G21320.1 [Oryza rufipogon] (57)
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| /----------------- (176)
| |
| |----------------- ORGLA02G0173200.1 [Oryza glaberrima] (24)
+ /-------99------+
| | |----------------- OBART02G20190.1 [Oryza barthii] (31)
| | |
| /-------100------+ \----------------- KN538917.1_FGP002 [Oryza longistaminata] (36)
| | |
| | \--------------------------------- OGLUM02G20510.1 [Oryza glumaepatula] (10)
\-------100------+
| /----------------- BGIOSGA008411-PA [Oryza sativa indica] (25)
\---------------100--------------+
\----------------- ONIVA02G22300.1 [Oryza nivara] (51)
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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