![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGMP3483
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 119:
/----- 462928914 [Eragrostis tef] (3)
/-99-+
| \----- 462898146 [Eragrostis tef] (4)
|
| /----- Zmw_sc01961.1.g00020.1 [Zoysia matrella] (20)
/------------55-----------+-100+
| | \----- Zjn_sc00018.1.g01040.1.sm.mk [Zoysia japonica] (39)
| |
| \---------- Oropetium_20150105_24240A [Oropetium thomaeum] (53)
|
| /----- GRMZM2G129034_P01 [Zea mays] (11)
| /-97-+
| | \----- GRMZM2G097059_P01 [Zea mays] (58)
| /-100+
| | \---------- Sobic.002G258000.1.p [Sorghum bicolor] (63)
/----80---+ /--61-+
| | | | /----- Seita.2G266600.1.p [Setaria italica] (31)
| | | \---100---+
| | | \----- Sevir.2G277000.1.p [Setaria viridis] (56)
| | /-63-+
| | | |--------------------- Pavir.2NG419400.1.p [Panicum virgatum] (16)
| | | |
| | /-98-+ \--------------------- Pavir.2NG422200.1.p [Panicum virgatum] (33)
| | | |
| \-99-+ \-------------------------- Pahal.B03420.1 [Panicum hallii] (22)
| |
/--61-+ \------------------------------- Do008628.1 [Dichanthelium oligosanthes] (52)
| |
| | /----------------------------------------- OB09G22330.1 [Oryza brachyantha] (6)
| | |
| | | /----- LOC_Os09g32948.1 [Oryza sativa japonica] (9)
| | | /---------70---------+
| | | | \----- BGIOSGA031056-PA [Oryza sativa indica] (43)
| | | |
| | | | /--------------- OBART09G15760.1 [Oryza barthii] (21)
| | | | |
| | | /-93-+ /--91-+ /---------- ORUFI09G17010.1 [Oryza rufipogon] (23)
| \-100+ | | | | |
| | | | | \-100+ /----- OMERI07G04970.1 [Oryza meridionalis] (51)
| | | | | \-100+
| | | \-96-+ \----- KN539355.1_FGP005 [Oryza longistaminata] (62)
/-53-+ | | |
| | | /-54-+ | /----- ONIVA09G16870.1 [Oryza nivara] (35)
| | | | | \-------51------+
| | | | | \----- OGLUM09G16330.1 [Oryza glumaepatula] (59)
| | | | |
| | \-53-+ |------------------------------- OPUNC09G14150.3 [Oryza punctata] (66)
| | | |
| | | \------------------------------- LPERR09G11910.1 [Leersia perrieri] (67)
| | |
| | \------------------------------------ ORGLA09G0121900.1 [Oryza glaberrima] (32)
| |
| | /----- Brast05G175600.1.p [Brachypodium stacei] (7)
| | /-100+
| | | \----- Bradi4g34680.1.p [Brachypodium distachyon] (38)
| \-------------------100-------------------+
| | /----- Traes_5BL_9627436AE.1 [Triticum aestivum] (54)
| \-100+
| \----- EMT12289 [Aegilops tauschii] (61)
|
| /----- Pavir.6KG379800.1.p [Panicum virgatum] (10)
| /-96-+
| | \----- Pavir.6NG327400.1.p [Panicum virgatum] (44)
| /-99-+
| | \---------- Pahal.F00616.1 [Panicum hallii] (12)
| /--55-+
| | | /----- Seita.6G223400.1.p [Setaria italica] (30)
| | \---100---+
| /-66-+ \----- Sevir.6G230500.1.p [Setaria viridis] (68)
| | |
| | | /----- Do013590.1 [Dichanthelium oligosanthes] (47)
/-100+ | \-------63------+
| | /-100+ \----- Oropetium_20150105_14683A [Oropetium thomaeum] (49)
| | | |
| | | | /----- GRMZM2G159397_P01 [Zea mays] (14)
| | | \---------100--------+
| | | \----- Sobic.007G193300.1.p [Sorghum bicolor] (36)
| | |
| | | /---------- ORGLA08G0230000.1 [Oryza glaberrima] (15)
| | | |
| | | |---------- BGIOSGA029052-PA [Oryza sativa indica] (17)
| | | |
| | | | /----- OB08G28330.1 [Oryza brachyantha] (19)
| | | |-97-+
| | | | \----- LPERR08G18320.1 [Leersia perrieri] (25)
| | /-100+ |
| | | | |---------- OBART08G21550.2 [Oryza barthii] (24)
| | | | |
| | | | | /----- OPUNC08G19670.1 [Oryza punctata] (34)
| | | | /----100---+-97-+
| | | | | | \----- ORUFI08G24040.2 [Oryza rufipogon] (46)
| | | | | |
| | | | | |---------- ONIVA08G24560.1 [Oryza nivara] (41)
| | | | | |
--99-+ | | | | |---------- KN539975.1_FGP005 [Oryza longistaminata] (42)
| | | | | |
| | | | | |---------- OMERI06G13620.1 [Oryza meridionalis] (50)
| | | | | |
| | | \----72---+ | /----- LOC_Os08g41950.1 [Oryza sativa japonica] (57)
| | | | \-61-+
| \---------50---------+ | \----- OGLUM08G22820.1 [Oryza glumaepatula] (64)
| | |
| | | /----- Bradi3g41260.1.p [Brachypodium distachyon] (18)
| | | /---100---+
| | | | \----- Brast03G289200.1.p [Brachypodium stacei] (48)
| | | |
| | | | /----- TRIUR3_28216-P1 [Triticum urartu] (37)
| | \-100-+ |
| | | /-73-+----- MLOC_56472.2 [Hordeum vulgare] (40)
| | | | |
| | \-100+ \----- EMT30881 [Aegilops tauschii] (65)
| | |
| | \---------- Traes_7AS_0CD3B69E7.2 [Triticum aestivum] (60)
| |
| \------------------------------------ Zmw_sc00443.1.g00060.1 [Zoysia matrella] (55)
|
\-------------------------------------------------------------- Aco015105.1 [Ananas comosus] (27)
Root part of tree:
/------------------------------------------------------------------- PEQU_06409 [Phalaenopsis equestris] (1)
|
| /------------- XP_010917559.1 [Elaeis guineensis] (26)
| /------93-----+
| | \------------- XP_010917558.1 [Elaeis guineensis] (45)
| /-----80-----+
| | \--------------------------- XP_010913017.1 [Elaeis guineensis] (69)
|------------64------------+
+ \---------------------------------------- GSMUA_Achr9P01370_001 [Musa acuminata] (28)
|
| /------------- PEQU_33205 [Phalaenopsis equestris] (2)
| /-------------------95-------------------+
| | \------------- PEQU_36764 [Phalaenopsis equestris] (5)
| |
| | /------------- (119)
\-----56-----+ /------77-----+
| | \------------- GSMUA_Achr11P19540_001 [Musa acuminata] (29)
| /-----97-----+
| | \--------------------------- Zosma127g00090.1 [Zostera marina] (8)
\------88-----+
\---------------------------------------- Zosma7g01530.1 [Zostera marina] (13)
|




