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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP5816
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Subtree rooted at node 103:
/-------------------------- OB01G32230.1 [Oryza brachyantha] (2)
|
| /---------- ONIVA01G25920.1 [Oryza nivara] (4)
| |
| | /----- LOC_Os01g42970.1 [Oryza sativa japonica] (10)
| |-100+
| | \----- ORUFI01G25560.1 [Oryza rufipogon] (11)
| |
| /-100+ /----- OBART01G22750.1 [Oryza barthii] (27)
/-94-+ | |-99-+
| | | | \----- ORGLA01G0182800.1 [Oryza glaberrima] (46)
| | | |
| | | |---------- OGLUM01G26510.1 [Oryza glumaepatula] (34)
| | /-100-+ |
| | | | \---------- BGIOSGA001204-PA [Oryza sativa indica] (35)
| | | |
/------100-----+ | | |--------------- OMERI01G20860.1 [Oryza meridionalis] (12)
| | \-100+ |
| | | \--------------- KN539312.1_FGP009 [Oryza longistaminata] (52)
| | |
| | \--------------------- OPUNC01G22960.1 [Oryza punctata] (57)
| |
| \------------------------------- LPERR01G19520.1 [Leersia perrieri] (28)
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| /----- Zmw_sc00235.1.g00270.1 [Zoysia matrella] (5)
| /-100+
| | \----- Zjn_sc00036.1.g02190.1.am.mkhc [Zoysia japonica] (32)
| /-100+
| | | /----- Zpz_sc00497.1.g00180.1.sm.mkhc [Zoysia pacifica] (26)
| | \-97-+
| /--96-+ \----- Zmw_sc00845.1.g00060.1 [Zoysia matrella] (33)
| | |
| | \--------------- Oropetium_20150105_19479A [Oropetium thomaeum] (36)
| /------100-----+
| | | /----- 462958633 [Eragrostis tef] (14)
| | \------100------+
| | \----- 462876117 [Eragrostis tef] (43)
| |
| | /----- Pavir.3KG355000.1.p [Panicum virgatum] (6)
| | /-100+
/-100-+ | | \----- Pavir.5NG285200.1.p [Panicum virgatum] (18)
| | | /-100+
| | | | \---------- Pavir.5KG413900.1.p [Panicum virgatum] (54)
| | /-100+ /-100-+
| | | | | \--------------- Pahal.D01839.1 [Panicum hallii] (21)
| | | | |
| | | | /-76-+ /----- Sevir.5G234400.1.p [Setaria viridis] (8)
| | | | | | /-55-+
| | | | | | | \----- Seita.5G226900.1.p [Setaria italica] (23)
| | | | /-100+ \----100---+
| | | | | | \---------- Seita.9G203700.1.p [Setaria italica] (22)
| | | | | |
| | | | | \-------------------------- Do000531.1 [Dichanthelium oligosanthes] (25)
| | | \-100+
| | | | /----- GRMZM2G039889_P06 [Zea mays] (16)
| | | | /-97-+
| | | | | \----- GRMZM2G422205_P01 [Zea mays] (29)
| | | \---------100--------+
| | | \---------- Sobic.003G220700.1.p [Sorghum bicolor] (31)
| | |
| | | /----- Traes_3AL_2A3EA5AD5.1 [Triticum aestivum] (7)
| | | /-100+
| | | | \----- Traes_3B_B1FA3F5F3.1 [Triticum aestivum] (30)
| \-53-+ /-71-+
| | | \---------- Traes_3DL_E04D27B7A.3 [Triticum aestivum] (13)
/-93-+ | /--99-+
| | | | \--------------- MLOC_17446.1 [Hordeum vulgare] (56)
| | | |
| | | | /----- TRAES3BF108200050CFD_t1 [Triticum aestivum] (24)
| | | | /-52-+
| | | /-100+ | \----- TRAES3BF093800020CFD_t1 [Triticum aestivum] (42)
| | | | | /-100+
| | | | | | \---------- Traes_3B_1B1E1E2B1.1 [Triticum aestivum] (47)
| | | | | |
| | | | \-100-+ /---------- Traes_3DL_EA11AA497.2 [Triticum aestivum] (45)
| | | | | |
| | | /-100+ \-89-+ /----- TRIUR3_27404-P1 [Triticum urartu] (51)
| | | | | \-99-+
| | | | | \----- Traes_3AL_7FD4FF43C.1 [Triticum aestivum] (55)
| | | | |
| | | | | /----- Brast01G216200.1.p [Brachypodium stacei] (40)
| | | | \---------100--------+
/-99-+ | \----74---+ \----- Bradi2g43600.2.p [Brachypodium distachyon] (53)
| | | |
| | | | /----- PH01001962G0090 [Phyllostachys heterocycla] (39)
| | | |-----------100-----------+
| | | | \----- PH01000333G0590 [Phyllostachys heterocycla] (49)
| | | |
| | | \------------------------------- PH01000333G0580 [Phyllostachys heterocycla] (50)
| | |
| | \---------------------------------------------------- Aco006100.1 [Ananas comosus] (19)
| |
| | /----- PDK_30s65509498g002 [Phoenix dactylifera] (3)
--96-+ | /-100+
| | | \----- XP_010913389.1 [Elaeis guineensis] (20)
| | /-100+
| | | | /----- PDK_30s946431g001 [Phoenix dactylifera] (17)
| | | \-99-+
| \--------------------84-------------------+ \----- XP_010924870.1 [Elaeis guineensis] (38)
| |
| \--------------- GSMUA_Achr1P28040_001 [Musa acuminata] (44)
|
| /----- PEQU_16233 [Phalaenopsis equestris] (41)
\---------------------------100--------------------------+
\----- PEQU_11093 [Phalaenopsis equestris] (48)
Root part of tree:
/------------------------------------------------------------------- Zosma40g00450.1 [Zostera marina] (1)
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| /--------------------------------- (103)
|----------------70---------------+
+ \--------------------------------- Spipo26G0017100 [Spirodela polyrhiza] (9)
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| /--------------------------------- Zosma196g00260.1 [Zostera marina] (15)
\----------------66---------------+
\--------------------------------- Zosma178g00430.1 [Zostera marina] (37)
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