![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGRP1048
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 102:
/--------------- Bradi4g12615.1.p [Brachypodium distachyon] (2)
|
| /----- Sobic.005G195400.1.p [Sorghum bicolor] (9)
/-100-+ /-100+
| | | \----- GRMZM2G165188_P01 [Zea mays] (29)
| \-99-+
/-97-+ \---------- LOC_Os11g41640.1 [Oryza sativa japonica] (44)
| |
| | /----- Bradi4g06567.3.p [Brachypodium distachyon] (16)
| \------100------+
| \----- LOC_Os12g32400.1 [Oryza sativa japonica] (39)
/-100+
| | /----- LOC_Os07g39940.1 [Oryza sativa japonica] (15)
| | /----91---+
| | | \----- Bradi1g22960.1.p [Brachypodium distachyon] (22)
| | |
| \----100---+ /----- Sobic.002G359200.1.p [Sorghum bicolor] (19)
| | /-99-+
| | | \----- GRMZM2G383841_P01 [Zea mays] (51)
| \-99-+
| \---------- GRMZM2G057260_P01 [Zea mays] (36)
|
/----77---+ /----- LOC_Os03g42100.1 [Oryza sativa japonica] (14)
| | /-63-+
| | | \----- Bradi1g14600.1.p [Brachypodium distachyon] (24)
| | /-100+
| | | \---------- Sobic.001G166700.1.p [Sorghum bicolor] (45)
| | |
| | /--78-+ /---------- Sobic.008G147800.1.p [Sorghum bicolor] (17)
| | | | |
| | | \-78-+ /----- Bradi4g03070.1.p [Brachypodium distachyon] (34)
| | | \-64-+
| | | \----- LOC_Os12g39850.1 [Oryza sativa japonica] (54)
| \---100---+
| | /----- GRMZM2G395549_P01 [Zea mays] (42)
| | /-100+
| | | \----- AC198518.3_FGP005 [Zea mays] (43)
| \----78----+
| | /----- Sobic.001G079300.1.p [Sorghum bicolor] (48)
| \-100+
| \----- LOC_Os03g55550.1 [Oryza sativa japonica] (50)
|
| /--------------- evm.model.supercontig_106.57 [Carica papaya] (3)
| |
| /--99-+ /---------- Solyc01g107140.1.1 [Solanum lycopersicum] (6)
| | | |
| | \-100+ /----- Solyc10g049780.1.1 [Solanum lycopersicum] (21)
/-67-+ | \-99-+
| | | \----- Solyc10g049720.1.1 [Solanum lycopersicum] (25)
| | |
| | /-88-+ /----- Glyma.20G133700.1.p [Glycine max] (8)
| | | | /-100+
| | | | | \----- Glyma.10G257400.1.p [Glycine max] (30)
| | | | /-100+
| | | | | | /----- Glyma.20G133600.1.p [Glycine max] (35)
| | | | | \-100+
| | | \--86-+ \----- Glyma.10G257500.1.p [Glycine max] (53)
| | /-84-+ |
| | | | | /----- AT4G33880.1 [Arabidopsis thaliana] (28)
| | | | \---100---+
| | | | \----- AT2G14760.3 [Arabidopsis thaliana] (49)
| | | |
| | /-88-+ | /----- Potri.001G294300.1 [Populus trichocarpa] (4)
| | | | \---------100--------+
| | | | \----- Potri.009G089000.1 [Populus trichocarpa] (37)
| | | |
| | | \------------------------------- GSVIVT01037846001 [Vitis vinifera] (52)
| | |
| | | /-------------------------- Solyc04g077960.1.1 [Solanum lycopersicum] (5)
/-100-+ | | |
| | | | | /---------- evm.model.supercontig_142.14 [Carica papaya] (7)
| | | | | |
| | \-72-+ | /-97-+ /----- AT1G27740.1 [Arabidopsis thaliana] (23)
| | | | | \-100+
| | | /-97-+ | \----- AT5G43175.1 [Arabidopsis thaliana] (41)
| | | | | /--98-+
| | | | | | | /----- Potri.002G119200.1 [Populus trichocarpa] (12)
| | | | | | \---100---+
| | | | | | \----- Potri.014G017100.1 [Populus trichocarpa] (31)
| | | | \-98-+
| | | | | /----- Glyma.14G088400.1.p [Glycine max] (11)
/-56-+ | \-53-+ | /-100+
| | | | | | \----- Glyma.17G236100.1.p [Glycine max] (38)
| | | | \----100---+
| | | | | /----- Glyma.06G045800.1.p [Glycine max] (27)
| | | | \-100+
| | | | \----- Glyma.04G045300.1.p [Glycine max] (32)
| | | |
/-100+ | | \------------------------------- GSVIVT01009357001 [Vitis vinifera] (18)
| | | |
| | | \---------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00164.27 [Amborella trichopoda] (20)
| | |
--100+ | \---------------------------------------------------- Mapoly0091s0008.1.p [Marchantia polymorpha] (10)
| |
| \--------------------------------------------------------- 419388 [Selaginella moellendorffii] (47)
|
\-------------------------------------------------------------- 404767 [Selaginella moellendorffii] (26)
Root part of tree:
/------------------------------------------------------------------- Pp3c3_8460V3.1.p [Physcomitrella patens] (1)
|
| /---------------------- Pp3c4_24380V3.1.p [Physcomitrella patens] (13)
|---------------------100--------------------+
+ \---------------------- Pp3c26_10830V3.1.p [Physcomitrella patens] (33)
|
| /--------------------------------------------- (102)
| |
\----------88---------+ /---------------------- Pp3c16_19970V3.1.p [Physcomitrella patens] (40)
\----------100---------+
\---------------------- Pp3c27_8050V3.1.p [Physcomitrella patens] (46)
|




