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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGRP253
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 222:
/---------------------------------------------- AT4G01460.1 [Arabidopsis thaliana] (2)
|
| /----- AT1G72210.1 [Arabidopsis thaliana] (3)
| /-92-+
| | \----- AT1G22490.1 [Arabidopsis thaliana] (122)
| /----55---+
| | \---------- evm.model.supercontig_36.191 [Carica papaya] (59)
| |
| | /----- Glyma.06G100000.1.p [Glycine max] (11)
| | /-100+
| /-51-+ | \----- Glyma.04G098400.1.p [Glycine max] (56)
| | | /-100+
| | | | | /----- Glyma.14G178000.1.p [Glycine max] (15)
| | | | \-100+
| /-64-+ \-79-+ \----- Glyma.02G210500.1.p [Glycine max] (111)
| | | |
| | | \--------------- Potri.002G101900.1 [Populus trichocarpa] (13)
| | |
|-------70------+ \------------------------- GSVIVT01009097001 [Vitis vinifera] (98)
| |
| | /----- Solyc04g074810.2.1 [Solanum lycopersicum] (66)
| \-----------93-----------+
| \----- Solyc12g087850.1.1 [Solanum lycopersicum] (79)
|
| /----- Bradi4g32650.1.p [Brachypodium distachyon] (4)
| /----99---+
| | \----- LOC_Os09g29360.1 [Oryza sativa japonica] (115)
| |
| /-100+ /----- GRMZM2G015666_P01 [Zea mays] (69)
| | | /-100+
| | | | \----- Sobic.002G232900.1.p [Sorghum bicolor] (84)
| | \-100+
| /------100------+ \---------- GRMZM2G082586_P01 [Zea mays] (89)
| | |
| | | /----- Bradi3g38510.1.p [Brachypodium distachyon] (39)
| | \------100-----+
| | \----- LOC_Os08g37730.1 [Oryza sativa japonica] (67)
| |
| | /-------------------- LOC_Os04g50090.1 [Oryza sativa japonica] (7)
| | |
| | | /----- Sobic.006G197500.1.p [Sorghum bicolor] (32)
| | | /-100+
| | /-86-+ | \----- Sobic.006G197400.1.p [Sorghum bicolor] (49)
| | | | /-100+
| | | | | \---------- GRMZM2G086474_P02 [Zea mays] (51)
| /-69-+ | \-99-+
| | | | \--------------- Bradi5g19950.1.p [Brachypodium distachyon] (60)
| | | /-99-+
| | | | | /----- Bradi3g52150.1.p [Brachypodium distachyon] (12)
| | | | | /----94---+
| | | | | | \----- LOC_Os02g46560.1 [Oryza sativa japonica] (120)
| | | | | |
| | | | \----95---+ /---------- GRMZM2G111146_P04 [Zea mays] (33)
| | | | | |
| | | | \-100+ /----- Sobic.004G275500.1.p [Sorghum bicolor] (77)
| | | | \-100+
| | | | \----- GRMZM2G091003_P01 [Zea mays] (90)
| | | |
| | \--66-+ /-------------------- Bradi3g58360.1.p [Brachypodium distachyon] (52)
| | | |
| | | | /--------------- LOC_Os02g52190.1 [Oryza sativa japonica] (97)
| | |---100---+ |
| | | | | /----- Sobic.004G228400.1.p [Sorghum bicolor] (190)
|-69-+ | \-100+ /-91-+
| | | | | \----- GRMZM2G008691_P03 [Zea mays] (118)
| | | \-100+
| | | \---------- GRMZM2G045883_P01 [Zea mays] (128)
| | |
| | \------------------------------ GRMZM2G175955_P01 [Zea mays] (54)
| |
| | /----- GRMZM2G006631_P01 [Zea mays] (24)
| | |
| | /-99-+----- AC233899.1_FGP002 [Zea mays] (25)
| | | |
| | /-69-+ \----- Sobic.001G476500.1.p [Sorghum bicolor] (125)
| | | |
| | /-99-+ \---------- LOC_Os03g08930.1 [Oryza sativa japonica] (42)
/-59-+ | | |
| | | | \--------------- Bradi1g71990.2.p [Brachypodium distachyon] (119)
| | | |
| | \---------99---------+ /----- Sobic.001G261448.1.p [Sorghum bicolor] (47)
| | | /-100+
| | | | \----- Sobic.K005500.1.p [Sorghum bicolor] (110)
| | \----99---+
| | \---------- LOC_Os10g23050.1 [Oryza sativa japonica] (116)
| |
| | /----- Glyma.07G049100.1.p [Glycine max] (5)
| | /-100+
| | | \----- Glyma.16G017700.1.p [Glycine max] (34)
| | |
| | |---------- GSVIVT01027446001 [Vitis vinifera] (14)
| | |
| |-----------------68----------------+ /----- Potri.014G106300.1 [Populus trichocarpa] (19)
| | |-100+
| | | \----- Potri.002G180300.1 [Populus trichocarpa] (131)
| | |
| | \---------- evm.model.supercontig_57.85 [Carica papaya] (76)
| |
| | /------------------------- GSVIVT01000012001 [Vitis vinifera] (8)
| | |
| | | /----- Glyma.10G156600.1.p [Glycine max] (38)
| | | /-100+
| | | | \----- Glyma.20G231800.1.p [Glycine max] (82)
| | | /-100+
| | /-100+ | | /----- Glyma.19G236900.1.p [Glycine max] (160)
| | | | | \-100+
| | | | /-74-+ \----- Glyma.03G240000.1.p [Glycine max] (114)
| | | | | |
| | | | | | /----- Potri.005G039800.1 [Populus trichocarpa] (150)
| |-------85------+ \-92-+ \---100---+
| | | | \----- Potri.013G025900.1 [Populus trichocarpa] (180)
| | | |
| | | \-------------------- evm.model.supercontig_48.15 [Carica papaya] (73)
| | |
| | \------------------------------ Solyc01g098720.2.1 [Solanum lycopersicum] (36)
| |
| | /--------------- Solyc08g076820.2.1 [Solanum lycopersicum] (16)
| | |
| | | /----- Potri.001G141100.1 [Populus trichocarpa] (31)
| | /-86-+ /-100+
| | | | | \----- Potri.003G093200.1 [Populus trichocarpa] (85)
| | | \-100+
| | | | /----- Glyma.08G271000.1.p [Glycine max] (40)
| |------------99-----------+ \-100+
| | | \----- Glyma.01G095500.1.p [Glycine max] (57)
| | |
| | \-------------------- AT5G46690.1 [Arabidopsis thaliana] (124)
| |
| | /----- MA_686524g0010 [Picea abies] (18)
| | /-55-+
| | | \----- MA_130776g0010 [Picea abies] (117)
| |-----------------73----------------+
| | \---------- MA_141469g0010 [Picea abies] (86)
| |
| | /----- Potri.007G097600.1 [Populus trichocarpa] (20)
/-54-+ | /-100+
| | | | \----- Potri.005G071100.1 [Populus trichocarpa] (100)
| | | /-52-+
| | | | \---------- AT5G65320.1 [Arabidopsis thaliana] (170)
| | | /-57-+
| | | | \--------------- evm.model.supercontig_55.64 [Carica papaya] (127)
| | |------------73-----------+
| | | \-------------------- Solyc11g010340.1.1 [Solanum lycopersicum] (30)
| | |
| | | /----- AT3G61950.1 [Arabidopsis thaliana] (45)
| | |-------------------100------------------+
| | | \----- AT2G46810.1 [Arabidopsis thaliana] (80)
| | |
| | |---------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00001.504 [Amborella trichopoda] (46)
| | |
| | |---------------------------------------------- GRMZM2G171464_P01 [Zea mays] (58)
| | |
| | |---------------------------------------------- GSVIVT01003437001 [Vitis vinifera] (64)
| | |
| | \---------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00008.115 [Amborella trichopoda] (78)
| |
| | /------------------------------ MA_57244g0010 [Picea abies] (6)
| | |
| | | /----- Sobic.009G250000.1.p [Sorghum bicolor] (9)
| | | /-100+
| | | | \----- GRMZM2G162450_P01 [Zea mays] (68)
| | | /-86-+
| | | | \---------- LOC_Os05g50900.1 [Oryza sativa japonica] (94)
| | | /-100+
| | | | \--------------- Bradi2g22810.1.p [Brachypodium distachyon] (62)
| | | /-78-+
| | /--78-+ | \-------------------- evm_27.model.AmTr_v1.0_scaffold00089.12 [Amborella trichopoda] (35)
| | | | |
| | | | | /----- Glyma.02G129100.1.p [Glycine max] (27)
| | | | | /------100-----+
| | | | | | \----- Glyma.01G093400.1.p [Glycine max] (113)
| | | | | |
| | | | | | /----- evm.model.supercontig_59.132 [Carica papaya] (55)
| | | | |-91-+ /-84-+
| | | | | | | \----- AT3G24140.1 [Arabidopsis thaliana] (92)
| | | \-90-+ | /-70-+
| |------52------+ | | | \---------- GSVIVT01021074001 [Vitis vinifera] (61)
| | | | \-86-+
/-91-+ | | | | /----- Potri.017G054500.1 [Populus trichocarpa] (87)
| | | | | \---100---+
| | | | | \----- Potri.001G314400.1 [Populus trichocarpa] (88)
| | | | |
| | | | |------------------------- Solyc05g053660.1.1 [Solanum lycopersicum] (37)
| | | | |
| | | | \------------------------- Solyc09g091760.1.1 [Solanum lycopersicum] (43)
| | | |
| | | \------------------------------------ 91359 [Selaginella moellendorffii] (48)
| | |
| | | /----- 430716 [Selaginella moellendorffii] (26)
| | |---------------------100---------------------+
| | | \----- 131087 [Selaginella moellendorffii] (140)
| | |
| | | /----- Pp3c19_19910V3.2.p [Physcomitrella patens] (71)
| | \---------------------100---------------------+
| | \----- Pp3c22_14220V3.3.p [Physcomitrella patens] (130)
| |
| |-------------------------------------------------------- Potri.008G202900.1 [Populus trichocarpa] (17)
| |
| |-------------------------------------------------------- Mapoly0031s0072.1.p [Marchantia polymorpha] (29)
| |
| | /----- GRMZM2G417164_P01 [Zea mays] (70)
| | /-100+
| | | \----- Sobic.009G260200.1.p [Sorghum bicolor] (120)
| |---------------------100---------------------+
--88-+ | | /----- Bradi1g18400.1.p [Brachypodium distachyon] (74)
| | \-95-+
| | \----- LOC_Os05g51820.1 [Oryza sativa japonica] (95)
| |
| | /----- Glyma.15G104600.1.p [Glycine max] (72)
| |------------------------100-----------------------+
| | \----- Glyma.13G208300.1.p [Glycine max] (75)
| |
| |-------------------------------------------------------- Solyc01g080050.2.1 [Solanum lycopersicum] (93)
| |
| |-------------------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00025.64 [Amborella trichopoda] (99)
| |
| |-------------------------------------------------------- MA_120602g0010 [Picea abies] (123)
| |
| |-------------------------------------------------------- AT3G06120.1 [Arabidopsis thaliana] (129)
| |
| \-------------------------------------------------------- GSVIVT01017892001 [Vitis vinifera] (130)
|
| /----- LOC_Os06g33450.2 [Oryza sativa japonica] (23)
| /-100+
| | \----- Bradi1g38650.1.p [Brachypodium distachyon] (126)
| /------100-----+
| | | /----- GRMZM2G045109_P01 [Zea mays] (44)
| | \-100+
| | \----- Sobic.010G152700.1.p [Sorghum bicolor] (96)
| |
\----------------100----------------+ /-------------------- Bradi3g09670.1.p [Brachypodium distachyon] (28)
| |
| | /----- Sobic.004G115000.1.p [Sorghum bicolor] (41)
| | /-100+
\-100+ | \----- GRMZM2G064638_P01 [Zea mays] (53)
| /-100+
| | \---------- GRMZM2G085751_P01 [Zea mays] (63)
\-76-+
\--------------- LOC_Os02g15760.1 [Oryza sativa japonica] (81)
Root part of tree:
/------------------------------------------------------------------ Glyma.04G238400.1.p [Glycine max] (1)
|
|------------------------------------------------------------------ Glyma.06G125500.1.p [Glycine max] (21)
|
| /----------- (222)
| /----77----+
| | \----------- evm_27.model.AmTr_v1.0_scaffold00015.95 [Amborella trichopoda] (91)
| /----53----+
| | | /----------- AT5G53210.1 [Arabidopsis thaliana] (50)
+ | \----74----+
| /----50----+ \----------- Solyc03g007410.2.1 [Solanum lycopersicum] (65)
| | |
| | \--------------------------------- evm.model.supercontig_3.51 [Carica papaya] (121)
| /----96----+
| | | /---------------------- GSVIVT01028719001 [Vitis vinifera] (10)
| | | |
| | \----------52---------+ /----------- Potri.015G022300.1 [Populus trichocarpa] (22)
\----100---+ \----100---+
| \----------- Potri.012G031800.1 [Populus trichocarpa] (112)
|
| /----------- Glyma.14G160700.1.p [Glycine max] (83)
\--------------------100--------------------+
\----------- Glyma.13G040100.1.p [Glycine max] (110)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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