 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGRP299
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 153:
/----- Glyma.06G000400.1.p [Glycine max] (3)
/-100+
| \----- Glyma.04G000600.1.p [Glycine max] (17)
/-----------100-----------+
| | /----- Glyma.14G001600.1.p [Glycine max] (23)
| \-100+
| \----- Glyma.02G311000.1.p [Glycine max] (56)
|
| /----- AT2G17150.1 [Arabidopsis thaliana] (6)
| /-100+
| | \----- AT4G35270.1 [Arabidopsis thaliana] (89)
| /-55-+
/-54-+ | \---------- AT4G38340.1 [Arabidopsis thaliana] (79)
| | /-------64------+
| | | \--------------- evm.model.supercontig_20.206 [Carica papaya] (86)
| | |
| | | /---------- Potri.016G042900.1 [Populus trichocarpa] (27)
| | | |
| | | /-100+ /----- Potri.009G166800.1 [Populus trichocarpa] (83)
| | | | \-100+
| \-54-+ /--71-+ \----- Potri.009G166400.1 [Populus trichocarpa] (95)
| | | |
/-54-+ | | \--------------- Potri.009G166300.1 [Populus trichocarpa] (92)
| | | /-70-+
| | | | | /----- Potri.001G293300.1 [Populus trichocarpa] (44)
| | | | \------100------+
| | \-70-+ \----- Potri.009G087500.1 [Populus trichocarpa] (93)
| | |
/--85-+ | | /----- Potri.009G166900.1 [Populus trichocarpa] (55)
| | | \---------100--------+
| | | \----- Potri.004G205500.1 [Populus trichocarpa] (90)
| | |
| | \----------------------------------------- GSVIVT01023886001 [Vitis vinifera] (70)
| |
| \---------------------------------------------- Solyc01g112190.2.1 [Solanum lycopersicum] (38)
|
| /----- Glyma.04G017400.1.p [Glycine max] (9)
/-68-+ /------100------+
| | | \----- Glyma.06G017800.1.p [Glycine max] (76)
| | |
| | | /----- AT1G76350.1 [Arabidopsis thaliana] (21)
| | /-100+ /-100+
| | | | | \----- AT1G20640.1 [Arabidopsis thaliana] (35)
| | | | /-100+
| | | | | \---------- evm.model.supercontig_26.186 [Carica papaya] (41)
| | | \--98-+
| \------------84-----------+ | /----- Potri.002G009700.1 [Populus trichocarpa] (28)
| | \---100---+
| | \----- Potri.005G251700.1 [Populus trichocarpa] (78)
| |
/-68-+ | /----- Solyc04g082480.2.1 [Solanum lycopersicum] (31)
| | \---------84---------+
| | \----- GSVIVT01013370001 [Vitis vinifera] (36)
| |
| | /----- Sobic.001G517800.1.p [Sorghum bicolor] (4)
| | /-100+
| | | \----- GRMZM2G109509_P01 [Zea mays] (30)
| | /----100---+
| | | | /----- Bradi1g76340.1.p [Brachypodium distachyon] (13)
| | | \-94-+
| | | \----- LOC_Os03g03900.1 [Oryza sativa japonica] (40)
--64-+ | |
| \----------------100----------------+ /----- LOC_Os09g37710.1 [Oryza sativa japonica] (11)
| | /---100---+
| | | \----- Bradi4g37147.2.p [Brachypodium distachyon] (37)
| | |
| \-100-+ /---------- Sobic.002G287400.1.p [Sorghum bicolor] (58)
| | |
| \-100+ /----- GRMZM2G048582_P01 [Zea mays] (67)
| \-98-+
| \----- GRMZM2G053298_P01 [Zea mays] (91)
|
\-------------------------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00001.1 [Amborella trichopoda] (77)
Subtree rooted at node 182:
/----- Glyma.15G027900.1.p [Glycine max] (2)
/-100+
| \----- Glyma.13G346300.1.p [Glycine max] (81)
/----100---+
| | /----- Glyma.12G050100.1.p [Glycine max] (15)
| \-100+
| \----- Glyma.11G125500.1.p [Glycine max] (73)
|
/-84-+ /----- GSVIVT01038090001 [Vitis vinifera] (8)
| | /----70---+
| | | \----- evm.model.supercontig_9.328 [Carica papaya] (60)
| | |
| \--82-+ /----- Potri.T078200.1 [Populus trichocarpa] (12)
| | /-100+
/-84-+ | | \----- Potri.017G018500.1 [Populus trichocarpa] (18)
| | \-100+
| | \---------- Potri.007G133400.1 [Populus trichocarpa] (62)
| |
| | /----- Solyc11g045350.1.1 [Solanum lycopersicum] (63)
/-100+ \---------100--------+
| | \----- Solyc08g013900.2.1 [Solanum lycopersicum] (75)
| |
| | /----- AT3G59580.1 [Arabidopsis thaliana] (29)
/-85-+ \-----------100-----------+
| | \----- AT2G43500.1 [Arabidopsis thaliana] (50)
| |
| \------------------------------------ evm_27.model.AmTr_v1.0_scaffold00066.150 [Amborella trichopoda] (71)
|
| /----- Bradi5g23300.1.p [Brachypodium distachyon] (25)
| /----67---+
/-99-+ | \----- LOC_Os04g41850.1 [Oryza sativa japonica] (33)
| | |
| | /-100-+ /----- GRMZM2G105004_P01 [Zea mays] (52)
| | | | /-100+
| | | | | \----- GRMZM2G031398_P02 [Zea mays] (88)
| | | \-100+
/--76-+ \--------100--------+ \---------- Sobic.006G133900.1.p [Sorghum bicolor] (61)
| | |
| | | /----- Bradi4g20720.1.p [Brachypodium distachyon] (32)
| | \------100------+
| | \----- LOC_Os11g16290.1 [Oryza sativa japonica] (46)
| |
| \---------------------------------------------- MA_10436384g0010 [Picea abies] (65)
|
| /----------------------------------------- (153)
| |
| | /---------- LOC_Os02g04340.1 [Oryza sativa japonica] (5)
| | |
| | /-98-+ /----- GRMZM2G042278_P01 [Zea mays] (22)
| | | \-100+
| | /----100---+ \----- Sobic.004G034100.1.p [Sorghum bicolor] (94)
| | | |
| | | \--------------- Bradi3g03170.1.p [Brachypodium distachyon] (64)
/-93-+ | |
| | | | /----- GRMZM2G375675_P01 [Zea mays] (7)
| | | | /-56-+
| | | /-51-+ | \----- GRMZM2G475305_P01 [Zea mays] (84)
| | | | | /-100+
| | | | | | \---------- Sobic.003G003600.1.p [Sorghum bicolor] (85)
| | | | | /-100-+
| | | | | | | /----- Bradi2g08177.1.p [Brachypodium distachyon] (49)
| | | | | | \---100---+
| | | | \-100+ \----- LOC_Os01g13540.1 [Oryza sativa japonica] (68)
| | | | |
| | | | | /----- Bradi2g31710.1.p [Brachypodium distachyon] (69)
| | | | \------100------+
| | | | \----- GRMZM2G176655_P01 [Zea mays] (74)
| | | |
| | | | /----- AT1G64530.1 [Arabidopsis thaliana] (10)
| | | | /-88-+
| \----58----+ | | \----- AT4G24020.1 [Arabidopsis thaliana] (20)
| | | /-80-+
| | | | | /----- Potri.003G143000.1 [Populus trichocarpa] (59)
| | | | \-100+
| | /-73-+ | \----- Potri.001G087900.1 [Populus trichocarpa] (87)
| | | | /--74-+
/-100+ | | | | | /----- Solyc08g008410.2.1 [Solanum lycopersicum] (42)
| | | | | | | /-100+
| | | | | | | | \----- Solyc08g082750.2.1 [Solanum lycopersicum] (96)
| | | | | | \-82-+
| | | | |----93---+ \---------- GSVIVT01019600001 [Vitis vinifera] (80)
| | | | | |
| | | | | | /----- Glyma.09G137000.1.p [Glycine max] (66)
| | | | | | /-100+
| | |-74-+ | | | \----- Glyma.16G182400.1.p [Glycine max] (97)
| | | | | \----100---+
| | | | | | /----- Glyma.10G234100.1.p [Glycine max] (72)
| | | | | \-100+
| | | | | \----- Glyma.20G160200.1.p [Glycine max] (82)
| | | | |
| | | | |------------------------------- evm_27.model.AmTr_v1.0_scaffold00058.115 [Amborella trichopoda] (24)
--93-+ | | | |
| | | | \------------------------------- evm_27.model.AmTr_v1.0_scaffold00080.66 [Amborella trichopoda] (26)
| | | |
| | | \------------------------------------ MA_20925g0010 [Picea abies] (16)
| | |
| | \----------------------------------------- Cre03.g177700.t1.1 [Chlamydomonas reinhardtii] (45)
| |
| | /----- 61084 [Selaginella moellendorffii] (14)
| \-------------------------93------------------------+
| \----- 172537 [Selaginella moellendorffii] (34)
|
| /----- Pp3c17_4375V3.1.p [Physcomitrella patens] (19)
| /-100+
| | \----- Pp3c17_4370V3.1.p [Physcomitrella patens] (48)
\------------------------100------------------------+
\---------- Pp3c12_2070V3.1.p [Physcomitrella patens] (54)
Root part of tree:
/------------------------------------------------------------------- Pp3c19_2720V3.1.p [Physcomitrella patens] (1)
|
|------------------------------------------------------------------- Pp3c19_2670V3.1.p [Physcomitrella patens] (47)
|
| /----------------- (182)
+ /------100------+
| | \----------------- Mapoly0083s0040.1.p [Marchantia polymorpha] (57)
| /-------100------+
| | | /----------------- Pp3c9_14600V3.1.p [Physcomitrella patens] (43)
| | \------100------+
\-------100------+ \----------------- Pp3c15_9180V3.1.p [Physcomitrella patens] (51)
|
| /----------------- Pp3c22_6370V3.1.p [Physcomitrella patens] (39)
\---------------100--------------+
\----------------- Pp3c22_6360V3.1.p [Physcomitrella patens] (53)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|