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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGRP365
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 197:
/----- LOC_Os06g01860.1 [Oryza sativa japonica] (2)
/-88-+
| \----- Bradi1g52000.1.p [Brachypodium distachyon] (11)
/--------------50--------------+
| \---------- evm_27.model.AmTr_v1.0_scaffold00018.9 [Amborella trichopoda] (15)
|
| /----- GRMZM2G024948_P01 [Zea mays] (4)
| /-100+
| | \----- Sobic.004G280500.1.p [Sorghum bicolor] (55)
| /-73-+
| | \---------- Bradi3g51840.3.p [Brachypodium distachyon] (84)
| /----88---+
| | \--------------- LOC_Os02g45850.1 [Oryza sativa japonica] (100)
| |
| | /----- GRMZM2G102059_P01 [Zea mays] (27)
| | /-87-+
| /-89-+ | \----- GRMZM2G018485_P01 [Zea mays] (61)
| | | /-93-+
| | | | \---------- Sobic.006G190400.1.p [Sorghum bicolor] (87)
| | | /-91-+
| | | | \--------------- Bradi5g19260.2.p [Brachypodium distachyon] (56)
| | \-79-+
| | \-------------------- LOC_Os04g49230.1 [Oryza sativa japonica] (180)
| |
|----79----+ /----- GRMZM2G098443_P01 [Zea mays] (36)
| | /-100+
| | | \----- GRMZM2G082227_P01 [Zea mays] (97)
| | /---100---+
| | | \---------- Sobic.001G528200.1.p [Sorghum bicolor] (63)
| | |
| | | /---------- Bradi1g77150.1.p [Brachypodium distachyon] (50)
| \----98---+ |
| | /-71-+ /----- Bradi3g32140.1.p [Brachypodium distachyon] (73)
| | | \-100+
| \-50-+ \----- LOC_Os10g39190.1 [Oryza sativa japonica] (90)
| |
| \--------------- LOC_Os03g02900.1 [Oryza sativa japonica] (78)
|
/----51---+ /----- Glyma.07G048200.1.p [Glycine max] (7)
| | /-100+
| | | \----- Glyma.16G017100.1.p [Glycine max] (10)
| | /--------100--------+
| | | | /----- Glyma.19G261300.1.p [Glycine max] (18)
| | | \-100+
| | | \----- Glyma.03G262200.1.p [Glycine max] (77)
| | |
| | | /----- Potri.001G452200.1 [Populus trichocarpa] (13)
| | | /---100---+
| | | | \----- Potri.011G149700.1 [Populus trichocarpa] (29)
| | /--53-+ |
| | | | /-100+ /---------- Solyc08g083400.2.1 [Solanum lycopersicum] (19)
| | | | | | |
| | | | | \-100+ /----- Solyc08g013690.1.1 [Solanum lycopersicum] (22)
| | | | /-100+ \-100+
| | | | | | \----- Solyc08g013700.1.1 [Solanum lycopersicum] (64)
| | | | | |
| | | \-92-+ \-------------------- evm.model.supercontig_37.108 [Carica papaya] (17)
| |-61-+ |
| | | \------------------------- GSVIVT01019699001 [Vitis vinifera] (62)
| | |
| | | /----- Potri.002G181600.1 [Populus trichocarpa] (20)
| | | /-100+
| | | | \----- Potri.014G107200.1 [Populus trichocarpa] (57)
| | | /-100+
| | | | \---------- evm.model.supercontig_57.71 [Carica papaya] (60)
| | \---------100--------+
| | \--------------- GSVIVT01027463001 [Vitis vinifera] (53)
| |
| |----------------------------------------- AT4G01500.1 [Arabidopsis thaliana] (39)
| |
| | /---------- AT1G01030.1 [Arabidopsis thaliana] (51)
| | |
| \--------------56--------------+ /----- AT2G46870.1 [Arabidopsis thaliana] (140)
| \-100+
| \----- AT3G61970.1 [Arabidopsis thaliana] (170)
|
| /---------- GRMZM2G159592_P01 [Zea mays] (5)
| |
| /-100+ /----- GRMZM2G059939_P02 [Zea mays] (45)
| | \-100+
| /-97-+ \----- Sobic.009G221400.1.p [Sorghum bicolor] (150)
| | |
| /----78---+ \--------------- LOC_Os05g47650.1 [Oryza sativa japonica] (38)
| | |
| | \-------------------- Bradi2g17610.1.p [Brachypodium distachyon] (52)
| |
| | /-------------------- LOC_Os01g49830.1 [Oryza sativa japonica] (14)
| | |
| /-100-+ | /--------------- GRMZM2G169654_P01 [Zea mays] (26)
| | | /-57-+ |
| | | | | | /----- GRMZM2G018336_P01 [Zea mays] (37)
| | | | \-100+ /-100+
| | | | | | \----- GRMZM2G065538_P01 [Zea mays] (66)
| | \-100+ \-100+
| | | \---------- Sobic.003G265200.1.p [Sorghum bicolor] (74)
| /-100+ |
| | | \------------------------- Bradi2g47220.1.p [Brachypodium distachyon] (88)
| | |
| | | /--------------- LOC_Os01g04750.1 [Oryza sativa japonica] (24)
| | | |
| | | | /----- Sobic.003G078100.1.p [Sorghum bicolor] (30)
| | \---------100--------+ /-100+
| | | | \----- LOC_Os01g04800.1 [Oryza sativa japonica] (43)
| | \-95-+
/-72-+ | | /----- Bradi2g02710.1.p [Brachypodium distachyon] (33)
| | | \-100+
| | | \----- Bradi2g02720.1.p [Brachypodium distachyon] (41)
| | |
| | | /----- Potri.008G117100.1 [Populus trichocarpa] (16)
| | | /-100+
| | | | \----- Potri.010G129200.1 [Populus trichocarpa] (40)
| | | /-53-+
| | | | \---------- GSVIVT01011947001 [Vitis vinifera] (76)
| | | |
| | | /-70-+ /----- Solyc04g007000.1.1 [Solanum lycopersicum] (42)
| | /-57-+ | | /-100+
| | | | | | | \----- Solyc05g009790.1.1 [Solanum lycopersicum] (65)
| | | | | \-82-+
| | | | | \---------- GSVIVT01036447001 [Vitis vinifera] (71)
| | | | /-80-+
| | | | | | /----- Glyma.20G186200.1.p [Glycine max] (54)
| | | | | | /-100+
| | | | | | | \----- Glyma.10G204400.1.p [Glycine max] (94)
| | | | | \---100---+
| | | | /-67-+ | /----- Glyma.01G087500.1.p [Glycine max] (59)
| | | | | | \-100+
| | | | | | \----- Glyma.02G099500.1.p [Glycine max] (98)
| | | | | |
| | | | | | /----- AT3G25730.1 [Arabidopsis thaliana] (81)
| | | | /--72-+ \--------100--------+
| | | | | | \----- AT1G13260.1 [Arabidopsis thaliana] (93)
| | | | | |
| | | | | | /----- AT1G68840.1 [Arabidopsis thaliana] (21)
| | | | | \-----------100----------+
| | | \-53-+ \----- AT1G25560.1 [Arabidopsis thaliana] (160)
| | | |
| | | |------------------------------------ evm_27.model.AmTr_v1.0_scaffold00007.249 [Amborella trichopoda] (68)
| | | |
/-87-+ | | \------------------------------------ evm.model.supercontig_46.140 [Carica papaya] (99)
| | |-50-+
| | | | /---------- Mapoly0072s0102.1.p [Marchantia polymorpha] (6)
| | | | |
| | | | /-99-+ /----- Pp3c1_16700V3.1.p [Physcomitrella patens] (48)
| | | | | \-100+
| | | | /-88-+ \----- Pp3c2_23660V3.2.p [Physcomitrella patens] (91)
| | | | | |
| | | | | \--------------- 110104 [Selaginella moellendorffii] (89)
| | | | /-56-+
| | | | | | /----- 59621 [Selaginella moellendorffii] (8)
| | | | | \------100-----+
| | | |---------63---------+ \----- 59628 [Selaginella moellendorffii] (49)
| | | | |
| | | | | /----- kfl00094_0070 [Klebsormidium flaccidum] (79)
| | | | \---------88--------+
| | | | \----- 71153 [Selaginella moellendorffii] (120)
| | | |
| | | | /----- MA_10436315g0020 [Picea abies] (12)
| | | |-------------------99-------------------+
| | | | \----- MA_23673g0010 [Picea abies] (75)
| | | |
| | | | /----- MA_178646g0010 [Picea abies] (69)
| | | | /-53-+
| | | | | \----- MA_10428163g0010 [Picea abies] (72)
| | | \----------------100----------------+
--100+ | | \---------- MA_116574g0010 [Picea abies] (80)
| | |
| | | /----- MA_246350g0010 [Picea abies] (23)
| | |----------------------86---------------------+
| | | \----- MA_3834g0010 [Picea abies] (32)
| | |
| | \--------------------------------------------------- 69265 [Selaginella moellendorffii] (86)
| |
| \-------------------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00114.66 [Amborella trichopoda] (35)
|
| /----- AT3G11580.1 [Arabidopsis thaliana] (3)
| /-97-+
| | \----- AT5G06250.2 [Arabidopsis thaliana] (44)
| /-84-+
| | \---------- AT2G36080.1 [Arabidopsis thaliana] (47)
| /-77-+
| | | /----- Potri.016G074500.1 [Populus trichocarpa] (46)
| | \---100---+
| | \----- Potri.006G208100.1 [Populus trichocarpa] (92)
| |
| |-------------------- GSVIVT01033902001 [Vitis vinifera] (25)
| |
| | /----- Glyma.02G200500.1.p [Glycine max] (28)
| | /-100+
| | | \----- Glyma.10G076100.1.p [Glycine max] (58)
\-------------------89-------------------+ /-97-+
| | | /----- Glyma.03G199000.1.p [Glycine max] (96)
| | \-100+
|-50-+ \----- Glyma.19G196600.1.p [Glycine max] (130)
| |
| | /----- Solyc10g083210.1.1 [Solanum lycopersicum] (70)
| \---100---+
| \----- Solyc09g010230.1.1 [Solanum lycopersicum] (110)
|
\-------------------- evm.TU.contig_29173.1 [Carica papaya] (95)
Root part of tree:
/------------------------------------------------------------------ Bradi4g25170.1.p [Brachypodium distachyon] (1)
|
| /------------- GRMZM2G328742_P01 [Zea mays] (31)
|-------------------------100------------------------+
| \------------- Sobic.005G041400.2.p [Sorghum bicolor] (67)
|
| /------------- (197)
+ /-----55-----+
| | \------------- Bradi4g42167.1.p [Brachypodium distachyon] (85)
| /------84-----+
| | \-------------------------- LOC_Os12g06080.1 [Oryza sativa japonica] (82)
| /-----85-----+
| | | /------------- Sobic.008G041100.1.p [Sorghum bicolor] (34)
| | \------------100-----------+
\-----63-----+ \------------- GRMZM5G805685_P02 [Zea mays] (83)
|
\----------------------------------------------------- LOC_Os11g05740.1 [Oryza sativa japonica] (9)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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