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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGRP410
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 162:
/----- MA_879g0010 [Picea abies] (2)
/-----------------91----------------+
| \----- MA_29238g0010 [Picea abies] (51)
|
| /----- Bradi4g27770.1.p [Brachypodium distachyon] (5)
| /----74---+
| | \----- LOC_Os09g13680.1 [Oryza sativa japonica] (83)
| |
| /-100-+ /----- Sobic.002G164700.1.p [Sorghum bicolor] (22)
| | | /-100+
| | | | \----- GRMZM2G150011_P01 [Zea mays] (70)
| | \-100+
| | \---------- GRMZM2G134998_P01 [Zea mays] (43)
| /-53-+
| | | /----- Solyc05g009770.1.1 [Solanum lycopersicum] (18)
| | | /---100---+
| | | | \----- AT1G13290.1 [Arabidopsis thaliana] (28)
| | | |
| | \--63-+ /----- Glyma.10G204300.1.p [Glycine max] (45)
/----54----+ | | /-95-+
| | | | | \----- Glyma.20G186400.1.p [Glycine max] (52)
| | | \-91-+
| | | | /----- Glyma.01G086800.1.p [Glycine max] (65)
| | /-94-+ \-100+
| | | | \----- Glyma.02G099100.1.p [Glycine max] (94)
| | | |
| | | |-------------------------- evm.model.supercontig_1.215 [Carica papaya] (48)
| | | |
| | | | /----- Potri.010G129000.1 [Populus trichocarpa] (58)
| | /-93-+ |---------53---------+
| | | | | \----- evm_27.model.AmTr_v1.0_scaffold00093.55 [Amborella trichopoda] (95)
| | | | |
| | | | \-------------------------- GSVIVT01011943001 [Vitis vinifera] (64)
| | | |
| | | | /----- MA_795128g0010 [Picea abies] (15)
| | | \------------99-----------+
| \-93-+ \----- MA_3555g0010 [Picea abies] (88)
| |
| | /---------- Mapoly0096s0050.1.p [Marchantia polymorpha] (24)
| | |
| | | /----- 57114 [Selaginella moellendorffii] (32)
| | |-99-+
| \------------89-----------+ \----- 36987 [Selaginella moellendorffii] (38)
| |
| | /----- Pp3c15_17790V3.1.p [Physcomitrella patens] (47)
| \-100+
| \----- Pp3c9_22230V3.1.p [Physcomitrella patens] (81)
|
| /---------- Sobic.003G363200.1.p [Sorghum bicolor] (3)
| |
| /----100---+ /----- Bradi2g55540.1.p [Brachypodium distachyon] (6)
| | \-99-+
| | \----- LOC_Os01g63980.1 [Oryza sativa japonica] (71)
| |
/-81-+ | /---------- Sobic.009G155200.1.p [Sorghum bicolor] (26)
| | /------99------+ |
| | | | /-100+ /----- GRMZM2G000836_P01 [Zea mays] (33)
| | | | | \-96-+
| | | | | \----- GRMZM2G027960_P01 [Zea mays] (41)
| | | \--86-+
| | | | /----- Bradi2g23870.1.p [Brachypodium distachyon] (62)
| | | \----78---+
| | | \----- LOC_Os05g37190.1 [Oryza sativa japonica] (85)
| | |
| | | /----- Glyma.11G184000.1.p [Glycine max] (16)
| | | /-100+
| | | | \----- Glyma.12G088400.1.p [Glycine max] (55)
| | | /-100+
| | /-84-+ | | /----- Glyma.13G317200.1.p [Glycine max] (35)
| | | | | \-100+
| | | | /--58-+ \----- Glyma.12G183900.1.p [Glycine max] (89)
| | | | | |
| | | | | | /----- Potri.004G183900.1 [Populus trichocarpa] (36)
| | | | | \----97---+
| | | | /-59-+ \----- Potri.009G143700.1 [Populus trichocarpa] (82)
| | | | | |
| | | | | |--------------------- evm.TU.contig_35924.1 [Carica papaya] (34)
| | | | /-54-+ |
| | | | | | \--------------------- Solyc06g074360.2.1 [Solanum lycopersicum] (60)
| | | | | |
| | /-81-+ \-97-+ \-------------------------- evm_27.model.AmTr_v1.0_scaffold00114.41 [Amborella trichopoda] (67)
| | | | |
| | | | \------------------------------- AT1G08290.1 [Arabidopsis thaliana] (56)
| | | |
| | | | /----- Potri.002G098200.1 [Populus trichocarpa] (39)
| | | | /-76-+
| | | | | \----- GSVIVT01009046001 [Vitis vinifera] (50)
/-57-+ | | | |
| | | | | |---------- evm.model.supercontig_36.149 [Carica papaya] (54)
| | \--59-+ | |
| | | | | /----- Glyma.13G090000.1.p [Glycine max] (57)
| | | \--------------78--------------+-100+
| | | | \----- Glyma.14G174900.1.p [Glycine max] (97)
| | | |
| | | |---------- AT1G34790.1 [Arabidopsis thaliana] (74)
| | | |
| | | \---------- Solyc04g074320.1.1 [Solanum lycopersicum] (79)
| | |
| | \---------------------------------------------- MA_4130g0010 [Picea abies] (4)
| |
| | /--------------- GRMZM2G061545_P01 [Zea mays] (8)
| | |
| | /--53-+ /---------- Sobic.010G190400.1.p [Sorghum bicolor] (9)
| | | | |
| | | \-90-+ /----- GRMZM2G436344_P01 [Zea mays] (11)
| | | \-100+
| | /-77-+ \----- GRMZM2G435357_P01 [Zea mays] (86)
| | | |
| | | | /----- LOC_Os06g40960.1 [Oryza sativa japonica] (59)
| | | \-------93------+
| | | \----- Bradi1g36067.1.p [Brachypodium distachyon] (72)
| | /-96-+
| | | | /----- LOC_Os09g10980.1 [Oryza sativa japonica] (63)
| | | | /-83-+
| | | | | \----- Bradi4g27170.1.p [Brachypodium distachyon] (75)
| | | \------100------+
| | | \---------- Sobic.002G153900.1.p [Sorghum bicolor] (80)
| | |
| | | /----- GRMZM2G084014_P01 [Zea mays] (13)
| | | /-100+
--70-+ \------------96-----------+ | \----- Sobic.002G245500.1.p [Sorghum bicolor] (21)
| | /------100------+
| | | \---------- Bradi4g33557.2.p [Brachypodium distachyon] (17)
| | |
| | | /----- GRMZM2G445684_P01 [Zea mays] (14)
| | | /-100+
| | | | \----- GRMZM2G071101_P01 [Zea mays] (66)
| | | /-100+
| \-100+ | \---------- Sobic.007G212900.1.p [Sorghum bicolor] (93)
| | /-100-+
| | | \--------------- LOC_Os08g39390.1 [Oryza sativa japonica] (25)
| |-100+
| | \--------------------- Bradi3g39820.2.p [Brachypodium distachyon] (29)
| |
| \-------------------------- LOC_Os09g31140.1 [Oryza sativa japonica] (96)
|
| /----- Glyma.10G095100.1.p [Glycine max] (19)
| /-100+
| | \----- Glyma.02G181100.1.p [Glycine max] (49)
| /-100+
| | | /----- Glyma.19G142600.1.p [Glycine max] (73)
| | \-100+
| | \----- Glyma.03G139800.1.p [Glycine max] (78)
| |
| | /----- GSVIVT01033329001 [Vitis vinifera] (27)
|----------------------50----------------------+----72---+
| | \----- Potri.016G052700.1 [Populus trichocarpa] (46)
| |
| |--------------- AT3G57670.1 [Arabidopsis thaliana] (76)
| |
| \--------------- evm.model.supercontig_85.133 [Carica papaya] (92)
|
\-------------------------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00022.356 [Amborella trichopoda] (31)
Root part of tree:
/------------------------------------------------------------------- 110681 [Selaginella moellendorffii] (1)
|
| /----------- AT3G20880.1 [Arabidopsis thaliana] (10)
|--------------------------100--------------------------+
| \----------- AT1G51220.1 [Arabidopsis thaliana] (30)
|
| /-------------------------------------------------------- (162)
| |
| | /----------- Glyma.12G057000.1.p [Glycine max] (7)
| | /----100---+
| | | \----------- Glyma.11G132600.1.p [Glycine max] (12)
| |---------------100---------------+
+ | \---------------------- Glyma.15G033600.1.p [Glycine max] (69)
| |
| | /----------- Glyma.12G237800.1.p [Glycine max] (20)
| | /----100---+
| | | \----------- Glyma.13G203700.1.p [Glycine max] (40)
| | /----100---+
| | | | /----------- Glyma.15G273400.1.p [Glycine max] (44)
| | | \----100---+
| | | \----------- Glyma.08G154500.1.p [Glycine max] (84)
| | /----100----+
| | | | /----------- Potri.009G062300.1 [Populus trichocarpa] (23)
\----82----+ | | /----100---+
| | | | \----------- Potri.001G267900.1 [Populus trichocarpa] (87)
|----82----+ \----96----+
| | \---------------------- evm.TU.contig_31438.1 [Carica papaya] (42)
| |
| \--------------------------------------------- GSVIVT01032076001 [Vitis vinifera] (77)
|
|-------------------------------------------------------- evm.model.supercontig_84.74 [Carica papaya] (37)
|
|-------------------------------------------------------- Solyc11g062060.1.1 [Solanum lycopersicum] (53)
|
|-------------------------------------------------------- GSVIVT01025301001 [Vitis vinifera] (61)
|
| /----------- Potri.003G205000.1 [Populus trichocarpa] (68)
|---------------------99---------------------+
| \----------- Potri.001G018900.1 [Populus trichocarpa] (90)
|
\-------------------------------------------------------- Solyc01g087050.2.1 [Solanum lycopersicum] (91)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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