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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGRP550
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 131:
/----- GRMZM2G006042_P03 [Zea mays] (4)
/-100+
| \----- Sobic.008G096000.1.p [Sorghum bicolor] (53)
/-100+
| \---------- GRMZM2G352159_P04 [Zea mays] (70)
/-100-+
| | /----- Bradi4g07470.1.p [Brachypodium distachyon] (43)
| \---100---+
| \----- LOC_Os12g29520.1 [Oryza sativa japonica] (73)
/-100+
| | /----- Sobic.005G132000.1.p [Sorghum bicolor] (30)
| | /-100+
| | | \----- GRMZM2G378580_P01 [Zea mays] (54)
| \----100---+
| | /----- Bradi4g17410.1.p [Brachypodium distachyon] (56)
| \-97-+
/---------93--------+ \----- LOC_Os11g32110.1 [Oryza sativa japonica] (77)
| |
| | /----- Bradi2g59480.1.p [Brachypodium distachyon] (34)
| | /---100---+
| | | \----- LOC_Os01g70270.1 [Oryza sativa japonica] (65)
| | |
| \----100---+ /---------- GRMZM2G116557_P02 [Zea mays] (46)
| | |
| \-100+ /----- GRMZM2G338259_P01 [Zea mays] (55)
| \-62-+
| \----- Sobic.003G411900.1.p [Sorghum bicolor] (74)
|
| /----- Glyma.08G008100.1.p [Glycine max] (9)
| /-100+
| | \----- Glyma.05G200800.1.p [Glycine max] (13)
| /-100+
| | | /----- Glyma.04G200600.1.p [Glycine max] (36)
/--68-+ | \-100+
| | /--97-+ \----- Glyma.06G164900.1.p [Glycine max] (68)
| | | |
| | /-84-+ \--------------- AT5G62000.1 [Arabidopsis thaliana] (62)
| | | |
| | | \--------------------- evm.TU.contig_31756.1 [Carica papaya] (31)
| | /-97-+
| | | | /----- Potri.012G106100.1 [Populus trichocarpa] (16)
| | | \---------100--------+
| | /-97-+ \----- Potri.015G105300.3 [Populus trichocarpa] (18)
| | | |
| | | \------------------------------- GSVIVT01008639001 [Vitis vinifera] (23)
/-87-+ | /-100+
| | | | | /----- Solyc03g118290.2.1 [Solanum lycopersicum] (24)
| | | | \--------------100-------------+
| | | | \----- Solyc12g042070.1.1 [Solanum lycopersicum] (57)
| | \-94-+
| | | /----- Potri.001G066200.1 [Populus trichocarpa] (33)
| | | /-100+
/-65-+ | | | \----- Potri.003G163600.1 [Populus trichocarpa] (60)
| | | \--------------98--------------+
| | | \---------- GSVIVT01004942001 [Vitis vinifera] (78)
| | |
--89-+ | \---------------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00016.128 [Amborella trichopoda] (5)
| |
| \--------------------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00057.126 [Amborella trichopoda] (41)
|
\-------------------------------------------------------------- Potri.002G207100.1 [Populus trichocarpa] (44)
Subtree rooted at node 153:
/-------------------------- GSVIVT01019566001 [Vitis vinifera] (2)
|
| /----- Glyma.07G134800.1.p [Glycine max] (10)
| /-100+
| | \----- Glyma.18G184500.1.p [Glycine max] (29)
| /-100+
/-95-+ | | /----- Glyma.03G070500.1.p [Glycine max] (35)
| | | \-100+
| | /--53-+ \----- Glyma.01G103500.1.p [Glycine max] (71)
| | | |
| | | \--------------- AT4G23980.1 [Arabidopsis thaliana] (80)
| | |
| \-95-+--------------------- evm.model.supercontig_15.1 [Carica papaya] (20)
/-100+ |
| | | /----- Potri.001G088600.1 [Populus trichocarpa] (38)
| | \------100------+
| | \----- Potri.003G142100.1 [Populus trichocarpa] (59)
| |
| | /----- Solyc08g008380.2.1 [Solanum lycopersicum] (26)
| \-----------100-----------+
| \----- Solyc08g082630.2.1 [Solanum lycopersicum] (66)
/-69-+
| | /----- Solyc01g096070.2.1 [Solanum lycopersicum] (15)
| | /-------51------+
| | | \----- GSVIVT01027166001 [Vitis vinifera] (17)
| | |
| | | /----- Potri.002G172800.1 [Populus trichocarpa] (19)
| | | /-100+
| \------69------+ | \----- Potri.014G100100.1 [Populus trichocarpa] (37)
| | /-69-+
/-100+ | | \---------- evm.model.supercontig_96.40 [Carica papaya] (61)
| | | |
| | \--74-+ /----- Glyma.07G054800.1.p [Glycine max] (39)
| | | /-100+
| | | | \----- Glyma.16G023600.1.p [Glycine max] (48)
| | \-100+
/--63-+ | \---------- Glyma.03G258300.1.p [Glycine max] (52)
| | |
| | | /----- AT3G61830.1 [Arabidopsis thaliana] (50)
| | \----------------100----------------+
| | \----- AT2G46530.3 [Arabidopsis thaliana] (72)
| |
| \---------------------------------------------- evm_27.model.AmTr_v1.0_scaffold00021.210 [Amborella trichopoda] (6)
|
| /--------------- (131)
/-100+ |
| | /----72----+ /---------- MA_10432580g0010 [Picea abies] (27)
| | | | |
| | | \-100+ /----- MA_92651g0010 [Picea abies] (40)
| | | \-74-+
| | | \----- MA_40335g0010 [Picea abies] (42)
| | |
| | | /----- 437944 [Selaginella moellendorffii] (11)
| \-----------100-----------+ /-100+
| | | \----- 81992 [Selaginella moellendorffii] (49)
| | /----95----+
| | | \---------- MA_10432349g0010 [Picea abies] (51)
| | |
| | | /----- Pp3c27_60V3.1.p [Physcomitrella patens] (12)
| | | /-100+
| \-100+ | \----- Pp3c16_6100V3.1.p [Physcomitrella patens] (82)
/-100+ | /-100+
| | | | | /----- Pp3c5_9420V3.1.p [Physcomitrella patens] (79)
| | | | \-100+
| | \-100-+ \----- Pp3c6_21370V3.2.p [Physcomitrella patens] (81)
| | |
| | \--------------- Mapoly0011s0167.1.p [Marchantia polymorpha] (67)
| |
| | /---------- GRMZM2G137413_P01 [Zea mays] (3)
| | |
| | /-100+ /----- Sobic.004G178500.1.p [Sorghum bicolor] (8)
| | | \-89-+
| | | \----- GRMZM2G702026_P01 [Zea mays] (22)
| | /-100-+
--68-+ | | | /----- LOC_Os02g35140.1 [Oryza sativa japonica] (58)
| | | \----82---+
| | | \----- Bradi3g45880.2.p [Brachypodium distachyon] (76)
| \----------------100----------------+
| | /--------------- Bradi5g10950.1.p [Brachypodium distachyon] (32)
| | |
| \-100-+ /---------- LOC_Os04g36054.1 [Oryza sativa japonica] (45)
| | |
| \-85-+ /----- GRMZM2G017187_P02 [Zea mays] (64)
| \-100+
| \----- Sobic.006G089500.1.p [Sorghum bicolor] (69)
|
\-------------------------------------------------------------- GSVIVT01037136001 [Vitis vinifera] (7)
Root part of tree:
/------------------------------------------------------------------- Glyma.07G272800.1.p [Glycine max] (1)
|
| /------------- (153)
| /------94-----+
| | \------------- AT1G59750.1 [Arabidopsis thaliana] (28)
| /-----82-----+
| | \--------------------------- Solyc01g103050.2.1 [Solanum lycopersicum] (21)
| /-----100-----+
+ | \---------------------------------------- GSVIVT01023149001 [Vitis vinifera] (14)
|-----100----+
| | /------------- Potri.003G001000.1 [Populus trichocarpa] (25)
| \-------------------100------------------+
| \------------- Potri.004G228800.1 [Populus trichocarpa] (63)
|
| /------------- Glyma.12G164100.1.p [Glycine max] (47)
\-------------------------100-------------------------+
\------------- Glyma.16G000300.1.p [Glycine max] (75)
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