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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Coffea canephora
B3 Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 112:
/----- Cc11_g01500/23-107 (2)
/-90-+
| \----- Cc00_g00220/16-104 (13)
/-----------100-----------+
| \---------- Cc00_g00230/9-59 (67)
|
| /----- Cc01_g05710/35-122 (5)
| /-100+
| | \----- Cc00_g02950/35-114 (36)
| /-71-+
| | \---------- Cc07_g20140/37-114 (53)
| /-100-+
| | \--------------- Cc07_g05470/26-114 (24)
| /-100+
/-96-+ | \--------------------- Cc00_g03230/30-116 (22)
| | /-97-+
| | | \-------------------------- Cc07_g20980/28-118 (23)
| | |
| | | /----- Cc00_g07580/16-106 (7)
| | |------------76-----------+
| | | \----- Cc10_g03670/25-112 (15)
| | |
| | | /----- Cc05_g09340/23-98 (8)
| | | /-77-+
| | | | \----- Cc07_g12880/25-99 (16)
| \-82-+ /-100+
| | | \---------- Cc08_g08270/16-94 (62)
/-95-+ |------100------+
| | | \--------------- Cc08_g06160/20-98 (37)
| | |
| | | /----- Cc02_g18270/22-113 (42)
| | |------------68-----------+
| | | \----- Cc00_g17370/18-93 (46)
| | |
| | \------------------------------- Cc10_g03680/16-100 (58)
/--51-+ |
| | | /----- Cc07_g05480/11-90 (34)
| | | /-100+
| | | | \----- Cc01_g06500/11-90 (69)
| | \--------------92--------------+
/-100+ | \---------- Cc07_g05490/6-93 (57)
| | |
| | \---------------------------------------------- Cc04_g10490/32-123 (47)
| |
| | /----- Cc00_g18110/11-101 (17)
| \----------------------100---------------------+
| \----- Cc00_g11360/11-101 (68)
|
| /---------- Cc07_g05470/267-362 (6)
| |
| /-99-+ /----- Cc00_g02950/248-343 (9)
| | \-91-+
|--------------------90-------------------+ \----- Cc07_g20140/257-352 (48)
| |
| \--------------- Cc00_g03230/217-308 (65)
|
| /----- Cc01_g15440/138-227 (12)
| /-98-+
| | \----- Cc07_g05930/219-309 (54)
| |
| | /----- Cc02_g18680/112-201 (20)
| |-95-+
| /-98-+ \----- Cc02_g18670/383-471 (31)
/-56-+ | |
| | | |---------- Cc02_g18670/35-125 (27)
| | | |
| |-------------------100-------------------+ | /----- Cc08_g05820/176-265 (33)
| | | \-100+
| | | \----- Cc10_g04280/131-220 (45)
| | |
| | \--------------- Cc08_g09050/122-214 (49)
| |
| | /----- Cc10_g03680/248-342 (14)
| | /-100+
| | | \----- Cc10_g03680/456-548 (25)
| |----------------------86----------------------+
| | \---------- Cc02_g18270/171-251 (30)
| |
| | /----- Cc08_g05580/72-160 (21)
| | /-86-+
| | | \----- Cc00_g12640/68-153 (44)
| |----------------------100---------------------+
| | | /----- Cc08_g05560/105-159 (26)
| | \-84-+
| | \----- Cc08_g05570/38-127 (56)
| |
| \--------------------------------------------------------- Cc10_g03670/225-306 (40)
|
| /----- Cc08_g17040/134-238 (3)
--53-+ /---------100--------+
| | \----- Cc06_g06260/85-193 (63)
| |
| | /---------- Cc02_g12530/338-437 (11)
| | |
| | /-100+ /----- Cc06_g00410/298-398 (19)
| | | \-86-+
| | /--93-+ \----- Cc01_g15330/314-413 (51)
|----------------100----------------+ | |
| | | \--------------- Cc05_g12680/154-255 (39)
| |-95-+
| | | /----- Cc07_g01190/80-180 (43)
| | \------100------+
| | \----- Cc01_g17380/854-950 (52)
| |
| | /----- Cc02_g23580/127-214 (29)
| \---------100--------+
| \----- Cc03_g12730/109-187 (50)
|
| /----- Cc00_g00230/359-440 (4)
|---------------------------100--------------------------+
| \----- Cc00_g00220/245-328 (18)
|
|-------------------------------------------------------------- Cc07_g05480/181-253 (32)
|
\-------------------------------------------------------------- Cc00_g07580/185-259 (61)
Root part of tree:
/------------------------------------------------------------------- Cc07_g12890/101-189 (1)
|
|------------------------------------------------------------------- Cc05_g09350/207-291 (10)
|
| /----------- (112)
| /----82----+
| | \----------- Cc00_g11360/227-306 (59)
| /----99----+
| | \---------------------- Cc07_g20980/203-287 (55)
| |
+ | /----------- Cc05_g09340/151-238 (28)
| /-----82----+---------100---------+
| | | \----------- Cc07_g12880/161-242 (38)
| | |
| | \--------------------------------- Cc08_g06160/150-235 (35)
| /----100---+
| | | /---------------------- Cc08_g08270/133-213 (41)
| | | |
| | \----------95----------+ /----------- Cc05_g09350/74-157 (60)
\----100---+ \----100---+
| \----------- Cc07_g12890/3-78 (64)
|
\-------------------------------------------------------- Cc08_g08270/259-346 (66)
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| Phylogenetic tree for protein ? help Back to Top |
|---|
/------------------------------------------------------------------- Cc00_g11360 (1)
|
|------------------------------------------------------------------- Cc00_g18110 (8)
|
| /------ Cc05_g12680 (2)
| /-91-+
| | \------ Cc02_g12530 (3)
| /-100-+
| | | /------ Cc01_g15330 (23)
| | \-99-+
| /-97-+ \------ Cc06_g00410 (28)
| | |
| | | /------ Cc06_g06260 (38)
| | \----100---+
| /--80-+ \------ Cc08_g17040 (46)
| | |
| | | /------ Cc03_g12730 (18)
| | \------100------+
| /-100+ \------ Cc02_g23580 (31)
| | |
| | | /------ Cc07_g01190 (32)
| | \---------100---------+
| | \------ Cc01_g17380 (42)
| /-----82----+
| | | /------ Cc08_g05580 (5)
| | | /-51-+
| | | | \------ Cc00_g12640 (44)
| | \---------100---------+
| | | /------ Cc08_g05570 (9)
| | \-100+
| | \------ Cc08_g05560 (30)
| |
| | /----------- Cc08_g08270 (4)
| | |
| | /--92-+ /------ Cc05_g09350 (12)
| | | \-100+
| | | \------ Cc07_g12890 (25)
| | |
| |------------100------------+ /------ Cc07_g12880 (11)
| | | /-100+
| | | | \------ Cc05_g09340 (26)
+ | \--90-+
| | \----------- Cc08_g06160 (36)
| |
| | /----------------- Cc07_g05470 (6)
| | |
| | | /------ Cc00_g02950 (19)
| | /-100+ /-100+
| /-89-+ | | | \------ Cc01_g05710 (40)
| | | | \-100-+
| | |----------100---------+ \----------- Cc07_g20140 (22)
| | | |
| | | \---------------------- Cc00_g03230 (34)
| | |
| | | /---------------------------- Cc08_g09050 (7)
| | | |
| | | | /----------------- Cc02_g18680 (10)
| | | | |
| | | /-100+ | /------ Cc08_g05820 (27)
| | | | | /-99-+ /-99-+
| | | | | | | | \------ Cc10_g04280 (43)
| | | | | | \--93-+
| | | | \--72-+ \----------- Cc01_g15440 (33)
| /--99-+ | /--58-+ |
| | | | | | | /------ Cc02_g18670 (37)
| | | | | | \-------59------+
| | | | | | \------ Cc07_g05930 (39)
| | | |--55-+ |
| | | | | \--------------------------------- Cc04_g10490 (13)
| | | | |
| | | | \--------------------------------------- Cc10_g03670 (15)
| | | |
| | | \--------------------------------------------- Cc00_g17370 (41)
| | |
| /-93-+ | /------ Cc02_g18270 (16)
| | | | /-73-+
| | | | | \------ Cc10_g03680 (45)
| | | \------------------80------------------+
| | | \----------- Cc00_g07580 (35)
| | |
| | | /------ Cc00_g00220 (14)
| | | /-100+
\-100-+ | | \------ Cc00_g00230 (21)
| | /-100-+
| | | \----------- Cc11_g01500 (17)
| \------------------88------------------+
| \----------------- Cc07_g20980 (24)
|
| /----------- Cc07_g05490 (20)
| |
\-----------------------100-----------------------+ /------ Cc07_g05480 (29)
\-100+
\------ Cc01_g06500 (47)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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