PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Phylogenetic Tree for
Castanea mollissima
GRAS Family
Phylogenetic tree for domain ? help Back to Top 

      /------------------------------------------------------------------- augustus_masked-scaffold09980-abinit-gene-0.2-mRNA-1/469-833  (1)
      |                                                                               
      |------------------------------------------------------------------- augustus_masked-scaffold02500-abinit-gene-0.2-mRNA-1/357-722  (44)
      |                                                                               
      |                                                             /----- maker-scaffold06283-snap-gene-0.8-mRNA-1/471-566              (2)
      |                                                        /-67-+                 
      |                                                        |    \----- maker-scaffold01006-snap-gene-0.25-mRNA-1/203-562             (58)
      |                                                   /-100+                      
      |                                                   |    \---------- maker-scaffold06283-snap-gene-0.8-mRNA-1/224-462              (35)
      |                    /--------------100-------------+                           
      |                    |                              \--------------- augustus_masked-scaffold01833-abinit-gene-0.1-mRNA-1/168-538  (16)
      |                    |                                                          
      |                    |---------------------------------------------- augustus_masked-scaffold00068-abinit-gene-0.5-mRNA-1/47-448   (3)
      |                    |                                                          
      |                    |                                        /----- snap_masked-scaffold02209-abinit-gene-0.36-mRNA-1/2-105       (4)
      |                    |                                        |                 
      |                    |                                        |----- snap_masked-scaffold02209-abinit-gene-0.26-mRNA-1/214-270     (5)
      |                    |                                        |                 
      |                    |                                   /-89-+----- maker-scaffold02209-augustus-gene-0.43-mRNA-1/469-550         (33)
      |                    |                                   |    |                 
      |                    |                                   |    |----- maker-scaffold02209-augustus-gene-0.43-mRNA-1/291-469         (34)
      |                    |                                   |    |                 
      |                    |                   /------100------+    \----- snap_masked-scaffold02209-abinit-gene-0.26-mRNA-1/266-330     (40)
      |                    |                   |               |                      
      |                    |                   |               |    /----- augustus_masked-scaffold02209-abinit-gene-0.0-mRNA-1/349-716  (6)
      |                    |                   |               \-59-+                 
      |                    |                   |                    \----- augustus_masked-scaffold09341-abinit-gene-0.3-mRNA-1/322-628  (47)
      |                    |                   |                                      
      |                    |                   |               /---------- maker-scaffold01337-augustus-gene-0.35-mRNA-1/332-569         (12)
      |                    |              /-54-+               |                      
      |                    |              |    |               |---------- maker-scaffold01337-augustus-gene-0.35-mRNA-1/575-671         (31)
      |                    |              |    |          /-100+                      
      |                    |              |    |          |    |    /----- augustus_masked-scaffold02739-abinit-gene-0.3-mRNA-1/345-716  (36)
      |                    |              |    |          |    \-91-+                 
      |                    |              |    |    /--64-+         \----- augustus_masked-scaffold00358-abinit-gene-1.3-mRNA-1/3-168    (41)
      |                    |         /-55-+    |    |     |                           
      |                    |         |    |    \-58-+     \--------------- snap_masked-scaffold01337-abinit-gene-0.14-mRNA-1/331-702     (50)
      |                    |         |    |         |                                 
      |                    |         |    |         \--------------------- augustus_masked-scaffold13000-abinit-gene-0.0-mRNA-1/386-757  (39)
      |                    |         |    |                                           
      |                    |         |    |                         /----- maker-scaffold00177-snap-gene-1.36-mRNA-1/255-645             (11)
      |                    |    /-100+    \-----------100-----------+                 
      |                    |    |    |                              \----- augustus_masked-scaffold00177-abinit-gene-0.6-mRNA-1/258-629  (55)
      |                    |    |    |                                                
      |                    |    |    |         /-------------------------- augustus_masked-scaffold00656-abinit-gene-0.13-mRNA-1/389-759 (7)
      |                    |    |    |         |                                      
      |                    |    |    |         |    /--------------------- snap_masked-scaffold00656-abinit-gene-0.45-mRNA-1/395-769     (9)
      |                    |    |    \----70---+    |                                 
      |                    |    |              |    |               /----- maker-scaffold04972-snap-gene-0.10-mRNA-1/1084-1456           (20)
      |                    |    |              |    |          /-58-+                 
      |                    |    |              \-100+          |    \----- maker-scaffold04972-snap-gene-0.10-mRNA-1/439-698             (30)
      |                    |    |                   |     /-80-+                      
      |                    |    |                   |     |    \---------- maker-scaffold04972-snap-gene-0.10-mRNA-1/392-437             (49)
      |                    |    |                   \--74-+                           
      |                    |    |                         \--------------- maker-scaffold04972-snap-gene-0.10-mRNA-1/1840-2208           (45)
      |                    |    |                                                     
      |                    |    |----------------------------------------- augustus_masked-scaffold15621-abinit-gene-0.0-mRNA-1/345-485  (8)
      |                    |    |                                                     
      +                    |    |                   /--------------------- augustus_masked-scaffold00246-abinit-gene-1.4-mRNA-1/211-580  (10)
      |                    |-59-+                   |                                 
      |                    |    |                   |               /----- augustus_masked-scaffold01722-abinit-gene-0.1-mRNA-1/178-548  (13)
      |                    |    |                   |          /-99-+                 
      |                    |    |              /-74-+          |    \----- augustus_masked-scaffold01919-abinit-gene-0.2-mRNA-1/174-544  (29)
      |              /-100-+    |              |    |     /-100+                      
      |              |     |    |              |    |     |    \---------- snap_masked-scaffold07610-abinit-gene-0.4-mRNA-1/193-570      (38)
      |              |     |    |------100-----+    \-100-+                           
      |              |     |    |              |          \--------------- augustus_masked-scaffold08610-abinit-gene-0.1-mRNA-1/209-579  (61)
      |              |     |    |              |                                      
      |              |     |    |              \-------------------------- augustus_masked-scaffold03933-abinit-gene-0.5-mRNA-1/181-556  (25)
      |              |     |    |                                                     
      |              |     |    |                                   /----- augustus_masked-scaffold01934-abinit-gene-0.3-mRNA-1/43-439   (14)
      |              |     |    |                              /-100+                 
      |              |     |    |                              |    \----- augustus_masked-scaffold02499-abinit-gene-0.12-mRNA-1/19-341  (48)
      |              |     |    |                         /-53-+                      
      |              |     |    |                         |    |    /----- augustus_masked-scaffold05957-abinit-gene-0.3-mRNA-1/106-482  (42)
      |              |     |    |                         |    \-100+                 
      |              |     |    \------------53-----------+         \----- augustus_masked-scaffold02513-abinit-gene-0.1-mRNA-1/60-433   (62)
      |              |     |                              |                           
      |              |     |                              |         /----- augustus_masked-scaffold12546-abinit-gene-0.1-mRNA-1/395-479  (24)
      |              |     |                              \----55---+                 
      |              |     |                                        \----- augustus_masked-scaffold12546-abinit-gene-0.1-mRNA-1/166-336  (28)
      |              |     |                                                          
      |              |     |                                        /----- maker-scaffold08547-augustus-gene-0.10-mRNA-1/345-702         (15)
      |              |     |                                   /-99-+                 
      |              |     |                                   |    \----- augustus_masked-scaffold00731-abinit-gene-0.3-mRNA-1/68-430   (54)
      |              |     |----------------100----------------+                      
      |              |     |                                   \---------- augustus_masked-scaffold05068-abinit-gene-0.0-mRNA-1/149-504  (18)
      |              |     |                                                          
      |              |     |---------------------------------------------- augustus_masked-scaffold01165-abinit-gene-0.8-mRNA-1/83-461   (17)
      |              |     |                                                          
      |              |     |                                        /----- augustus_masked-scaffold10186-abinit-gene-0.1-mRNA-1/41-148   (19)
      |         /-100+     |                                   /-86-+                 
      |         |    |     |                                   |    \----- maker-scaffold10186-augustus-gene-0.11-mRNA-1/3-242           (52)
      |         |    |     |                              /-99-+                      
      |         |    |     |                              |    |    /----- augustus_masked-scaffold00142-abinit-gene-0.0-mRNA-1/41-100   (32)
      |         |    |     |                              |    \-100+                 
      |         |    |     |                        /-100-+         \----- maker-scaffold06123-augustus-gene-0.16-mRNA-1/522-870         (63)
      |         |    |     |                        |     |                           
      |         |    |     |-----------100----------+     \--------------- maker-scaffold06123-augustus-gene-0.16-mRNA-1/48-466          (27)
      |         |    |     |                        |                                 
      |         |    |     |                        \--------------------- augustus_masked-scaffold00555-abinit-gene-1.2-mRNA-1/49-470   (22)
      |         |    |     |                                                          
      |         |    |     |---------------------------------------------- augustus_masked-scaffold15621-abinit-gene-0.0-mRNA-1/224-345  (21)
      |         |    |     |                                                          
      |         |    |     |---------------------------------------------- maker-scaffold00048-snap-gene-1.53-mRNA-1/39-122              (23)
      |         |    |     |                                                          
      |    /-63-+    |     |---------------------------------------------- maker-scaffold03906-augustus-gene-0.14-mRNA-1/239-578         (43)
      |    |    |    |     |                                                          
      |    |    |    |     |                                        /----- augustus_masked-scaffold09132-abinit-gene-0.3-mRNA-1/154-523  (46)
      |    |    |    |     |-------------------90-------------------+                 
      |    |    |    |     |                                        \----- maker-scaffold23116-augustus-gene-0.5-mRNA-1/2-271            (60)
      |    |    |    |     |                                                          
      |    |    |    |     |---------------------------------------------- augustus_masked-scaffold30895-abinit-gene-0.1-mRNA-1/34-141   (51)
      |    |    |    |     |                                                          
      |    |    |    |     |---------------------------------------------- augustus_masked-scaffold00487-abinit-gene-0.3-mRNA-1/309-675  (53)
      \-91-+    |    |     |                                                          
           |    |    |     \---------------------------------------------- snap_masked-scaffold00795-abinit-gene-0.46-mRNA-1/150-421     (56)
           |    |    |                                                                
           |    |    \---------------------------------------------------- augustus_masked-scaffold01116-abinit-gene-0.6-mRNA-1/186-555  (37)
           |    |                                                                     
           |    \--------------------------------------------------------- augustus_masked-scaffold04011-abinit-gene-0.1-mRNA-1/255-619  (26)
           |                                                                          
           |                                                        /----- augustus_masked-scaffold02500-abinit-gene-0.4-mRNA-1/257-620  (57)
           \---------------------------100--------------------------+                 
                                                                    \----- augustus_masked-scaffold04011-abinit-gene-0.3-mRNA-1/258-622  (59)
Phylogenetic tree for protein ? help Back to Top 

      /------------------------------------------------------------------- augustus_masked-scaffold02500-abinit-gene-0.2-mRNA-1  (1)
      |                                                                               
      |------------------------------------------------------------------- augustus_masked-scaffold09980-abinit-gene-0.2-mRNA-1  (32)
      |                                                                               
      |                                                   /--------------- augustus_masked-scaffold02209-abinit-gene-0.0-mRNA-1  (2)
      |                                                   |                           
      |                                                   |         /----- snap_masked-scaffold02209-abinit-gene-0.26-mRNA-1     (39)
      |                                             /-100-+    /-51-+                 
      |                                             |     |    |    \----- maker-scaffold02209-augustus-gene-0.43-mRNA-1         (52)
      |                                             |     \-100+                      
      |                                        /-100+          \---------- snap_masked-scaffold02209-abinit-gene-0.36-mRNA-1     (45)
      |                                        |    |                                 
      |                                        |    \--------------------- augustus_masked-scaffold09341-abinit-gene-0.3-mRNA-1  (17)
      |                                        |                                      
      |                                   /-73-+                    /----- maker-scaffold04972-snap-gene-0.10-mRNA-1             (26)
      |                                   |    |               /-100+                 
      |                                   |    |               |    \----- snap_masked-scaffold00656-abinit-gene-0.45-mRNA-1     (33)
      |                                   |    \------100------+                      
      |                              /-61-+                    \---------- augustus_masked-scaffold00656-abinit-gene-0.13-mRNA-1 (31)
      |                              |    |                                           
      |                              |    |                         /----- maker-scaffold00177-snap-gene-1.36-mRNA-1             (5)
      |                              |    \-----------100-----------+                 
      |                              |                              \----- augustus_masked-scaffold00177-abinit-gene-0.6-mRNA-1  (22)
      |                              |                                                
      |                              |                              /----- augustus_masked-scaffold00358-abinit-gene-1.3-mRNA-1  (7)
      |                         /-100+                         /-100+                 
      |                         |    |                         |    \----- augustus_masked-scaffold02739-abinit-gene-0.3-mRNA-1  (28)
      |                         |    |                    /-100+                      
      |                         |    |                    |    \---------- maker-scaffold01337-augustus-gene-0.35-mRNA-1         (15)
      |                         |    |---------66---------+                           
      |                         |    |                    \--------------- snap_masked-scaffold01337-abinit-gene-0.14-mRNA-1     (51)
      |                         |    |                                                
      |                         |    \------------------------------------ augustus_masked-scaffold13000-abinit-gene-0.0-mRNA-1  (21)
      |                         |                                                     
      |                         |                                   /----- augustus_masked-scaffold01919-abinit-gene-0.2-mRNA-1  (10)
      |                         |                              /-88-+                 
      |                    /-57-+                              |    \----- augustus_masked-scaffold01722-abinit-gene-0.1-mRNA-1  (12)
      |                    |    |                         /-98-+                      
      |                    |    |                         |    \---------- snap_masked-scaffold07610-abinit-gene-0.4-mRNA-1      (48)
      |                    |    |                   /--98-+                           
      |                    |    |                   |     \--------------- augustus_masked-scaffold08610-abinit-gene-0.1-mRNA-1  (14)
      |                    |    |              /-98-+                                 
      |                    |    |              |    |               /----- augustus_masked-scaffold00246-abinit-gene-1.4-mRNA-1  (16)
      |                    |    |              |    \-------86------+                 
      |                    |    |              |                    \----- augustus_masked-scaffold03933-abinit-gene-0.5-mRNA-1  (44)
      |                    |    |              |                                      
      |                    |    \------79------+                    /----- augustus_masked-scaffold02499-abinit-gene-0.12-mRNA-1 (11)
      |                    |                   |          /---100---+                 
      |                    |                   |          |         \----- augustus_masked-scaffold01934-abinit-gene-0.3-mRNA-1  (19)
      +                    |                   |          |                           
      |                    |                   \----100---+         /----- augustus_masked-scaffold02513-abinit-gene-0.1-mRNA-1  (24)
      |                    |                              |    /-100+                 
      |                    |                              |    |    \----- augustus_masked-scaffold05957-abinit-gene-0.3-mRNA-1  (37)
      |                    |                              \-69-+                      
      |                    |                                   \---------- augustus_masked-scaffold12546-abinit-gene-0.1-mRNA-1  (53)
      |                    |                                                          
      |                    |                                        /----- maker-scaffold06283-snap-gene-0.8-mRNA-1              (3)
      |                    |                                   /-100+                 
      |                    |                                   |    \----- maker-scaffold01006-snap-gene-0.25-mRNA-1             (42)
      |                    |                        /----100---+                      
      |                    |                        |          \---------- augustus_masked-scaffold01833-abinit-gene-0.1-mRNA-1  (4)
      |                    |                        |                                 
      |                    |-----------59-----------+     /--------------- augustus_masked-scaffold00555-abinit-gene-1.2-mRNA-1  (8)
      |                    |                        |     |                           
      |                    |                        |     |         /----- augustus_masked-scaffold00142-abinit-gene-0.0-mRNA-1  (18)
      |              /--79-+                        \-100-+    /-100+                 
      |              |     |                              |    |    \----- maker-scaffold06123-augustus-gene-0.16-mRNA-1         (20)
      |              |     |                              |    |                      
      |              |     |                              \-100+---------- augustus_masked-scaffold10186-abinit-gene-0.1-mRNA-1  (43)
      |              |     |                                   |                      
      |              |     |                                   \---------- maker-scaffold10186-augustus-gene-0.11-mRNA-1         (49)
      |              |     |                                                          
      |              |     |---------------------------------------------- augustus_masked-scaffold09132-abinit-gene-0.3-mRNA-1  (6)
      |              |     |                                                          
      |              |     |---------------------------------------------- augustus_masked-scaffold15621-abinit-gene-0.0-mRNA-1  (9)
      |              |     |                                                          
      |              |     |                                        /----- maker-scaffold08547-augustus-gene-0.10-mRNA-1         (23)
      |              |     |                                   /-99-+                 
      |              |     |                                   |    \----- augustus_masked-scaffold00731-abinit-gene-0.3-mRNA-1  (46)
      |              |     |----------------100----------------+                      
      |              |     |                                   \---------- augustus_masked-scaffold05068-abinit-gene-0.0-mRNA-1  (50)
      |         /-100+     |                                                          
      |         |    |     |                                        /----- maker-scaffold03906-augustus-gene-0.14-mRNA-1         (25)
      |         |    |     |-------------------64-------------------+                 
      |         |    |     |                                        \----- augustus_masked-scaffold00068-abinit-gene-0.5-mRNA-1  (29)
      |         |    |     |                                                          
      |         |    |     |---------------------------------------------- maker-scaffold00048-snap-gene-1.53-mRNA-1             (34)
      |         |    |     |                                                          
      |         |    |     |---------------------------------------------- maker-scaffold23116-augustus-gene-0.5-mRNA-1          (35)
      |         |    |     |                                                          
      |    /-100+    |     |---------------------------------------------- augustus_masked-scaffold01165-abinit-gene-0.8-mRNA-1  (38)
      |    |    |    |     |                                                          
      |    |    |    |     |---------------------------------------------- augustus_masked-scaffold00487-abinit-gene-0.3-mRNA-1  (40)
      |    |    |    |     |                                                          
      |    |    |    |     \---------------------------------------------- snap_masked-scaffold00795-abinit-gene-0.46-mRNA-1     (41)
      |    |    |    |                                                                
      |    |    |    \---------------------------------------------------- augustus_masked-scaffold30895-abinit-gene-0.1-mRNA-1  (13)
      \-100+    |                                                                     
           |    \--------------------------------------------------------- augustus_masked-scaffold01116-abinit-gene-0.6-mRNA-1  (30)
           |                                                                          
           |                                                        /----- augustus_masked-scaffold04011-abinit-gene-0.3-mRNA-1  (27)
           |---------------------------98---------------------------+                 
           |                                                        \----- augustus_masked-scaffold02500-abinit-gene-0.4-mRNA-1  (36)
           |                                                                          
           \-------------------------------------------------------------- augustus_masked-scaffold04011-abinit-gene-0.1-mRNA-1  (47)