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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Oryza sativa subsp. indica
GRAS Family| Phylogenetic tree for domain ? help Back to Top |
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Subtree rooted at node 113:
/----- BGIOSGA019760-PA/174-575 (2)
/-98-+
| \----- BGIOSGA019758-PA/134-424 (60)
/-------81------+
| | /----- BGIOSGA022538-PA/3-56 (39)
| \-100+
| \----- BGIOSGA005161-PA/7-371 (61)
|
| /---------- BGIOSGA034523-PA/39-476 (10)
| |
/------99------+ /-50-+ /----- BGIOSGA034519-PA/309-691 (30)
| | | \-59-+
| | | \----- BGIOSGA034519-PA/39-256 (41)
| | /--76-+
| | | |--------------- BGIOSGA020863-PA/38-81 (51)
| | | |
| | | \--------------- BGIOSGA035598-PA/9-54 (52)
| \-80-+
| | /----- BGIOSGA034522-PA/20-439 (16)
| | /-100+
| | | \----- BGIOSGA038821-PA/20-126 (33)
| \----100---+
| | /----- BGIOSGA034521-PA/34-484 (48)
| \-100+
| \----- BGIOSGA034518-PA/34-481 (62)
|
| /--------------------- BGIOSGA022141-PA/127-478 (4)
| |
| | /---------- BGIOSGA011665-PA/129-499 (12)
| | |
| /-100+ /-100+ /----- BGIOSGA031446-PA/296-383 (14)
| | | | \-100+
| | | | \----- BGIOSGA031446-PA/443-804 (15)
| | | |
| | \--95-+ /----- BGIOSGA008764-PA/357-714 (19)
| | | /-88-+
| /-74-+ | | \----- BGIOSGA008763-PA/353-710 (65)
| | | \-100+
| | | \---------- BGIOSGA016901-PA/354-611 (47)
| | |
| /-82-+ | /----- BGIOSGA037038-PA/175-559 (17)
| | | \---------100--------+
/-89-+ | | \----- BGIOSGA034855-PA/48-410 (24)
| |-50-+ |
| | | \------------------------------- BGIOSGA012273-PA/132-529 (6)
| | |
| | \------------------------------------ BGIOSGA013482-PA/209-578 (36)
| |
| | /----- BGIOSGA034703-PA/234-594 (11)
| | /-100+
| | | \----- BGIOSGA036912-PA/235-595 (32)
| | /-100+
| | | \---------- BGIOSGA025964-PA/53-418 (64)
| |------------99-----------+
| | \--------------- BGIOSGA020074-PA/117-484 (38)
| |
| | /---------- BGIOSGA013420-PA/241-621 (13)
| | |
| |--------------100-------------+ /----- BGIOSGA001121-PA/86-449 (34)
| | \-100+
| | \----- BGIOSGA020412-PA/78-454 (44)
| |
| | /----- BGIOSGA022020-PA/217-595 (26)
| |----------------100----------------+
| | \----- BGIOSGA013002-PA/28-124 (56)
/--82-+ |
| | |----------------------------------------- BGIOSGA015085-PA/91-156 (35)
| | |
| | |----------------------------------------- BGIOSGA033939-PA/13-53 (40)
| | |
| | |----------------------------------------- BGIOSGA033939-PA/52-317 (42)
| | |
| | | /----- BGIOSGA006948-PA/37-420 (50)
| | \----------------100----------------+
| | \----- BGIOSGA023255-PA/51-437 (55)
| |
| | /----- BGIOSGA005839-PA/254-618 (3)
| | /---------100--------+
| | | \----- BGIOSGA014504-PA/262-619 (22)
| | |
| | | /----- BGIOSGA032058-PA/154-523 (18)
| | | /-100+
| | /-100+ | \----- BGIOSGA012030-PA/167-535 (57)
/-100+ | | | /-97-+
| | | | | | \---------- BGIOSGA026022-PA/174-543 (59)
| | | | | /-100-+
| | | | | | \--------------- BGIOSGA025902-PA/200-568 (53)
| | | | \-99-+
| | \------80------+ \--------------------- BGIOSGA000383-PA/123-349 (29)
| | |
| | | /----- BGIOSGA026037-PA/193-601 (8)
| | | /---100---+
| | | | \----- BGIOSGA010480-PA/189-602 (45)
| | | |
/-61-+ | \------100------+ /---------- BGIOSGA010551-PA/134-520 (20)
| | | | |
| | | \-97-+ /----- BGIOSGA026051-PA/77-470 (23)
| | | \-100+
| | | \----- BGIOSGA020123-PA/37-423 (27)
| | |
| | | /----- BGIOSGA004999-PA/157-531 (7)
| | \----------------------100---------------------+
| | \----- BGIOSGA005001-PA/72-274 (21)
| |
--82-+ \--------------------------------------------------------- BGIOSGA004778-PA/442-811 (66)
|
| /----- BGIOSGA018950-PA/355-728 (25)
| /-96-+
| | \----- BGIOSGA018951-PA/259-626 (37)
| /-100+
| | \---------- BGIOSGA013074-PA/325-697 (49)
|----------------------97----------------------+
| \--------------- BGIOSGA010017-PA/356-727 (54)
|
\-------------------------------------------------------------- BGIOSGA017023-PA/262-634 (31)
Root part of tree:
/------------------------------------------------------------------- BGIOSGA035742-PA/229-473 (1)
|
|------------------------------------------------------------------- BGIOSGA035741-PA/304-681 (43)
|
| /------------- (113)
| /------------82------------+
+ | \------------- BGIOSGA037646-PA/332-704 (46)
| |
| /------75-----+ /------------- BGIOSGA035744-PA/216-585 (5)
| | | /-----100-----+
| | | | \------------- BGIOSGA035745-PA/214-583 (63)
| | \-----82-----+
\-----100----+ | /------------- BGIOSGA036958-PA/167-546 (9)
| \-----100-----+
| \------------- BGIOSGA034760-PA/173-553 (28)
|
\------------------------------------------------------ BGIOSGA035743-PA/264-638 (58)
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| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 117:
/---------- BGIOSGA013420-PA (2)
|
/-100+ /----- BGIOSGA020412-PA (47)
| \-100+
| \----- BGIOSGA001121-PA (52)
|
/---------72---------+ /----- BGIOSGA005001-PA (50)
| | /-100+
| | | \----- BGIOSGA004999-PA (54)
| \-91-+
| \---------- BGIOSGA033939-PA (55)
|
| /----- BGIOSGA022020-PA (4)
| /-----------100-----------+
/-92-+ | \----- BGIOSGA013002-PA (37)
| | |
| | | /----- BGIOSGA034519-PA (5)
| | | /-100+
| | | | \----- BGIOSGA034523-PA (29)
| | | /-63-+
| | | | \---------- BGIOSGA020863-PA (10)
| | | |
| \-99-+ /--57-+ /----- BGIOSGA034518-PA (18)
| | | | /-100+
| | | | | \----- BGIOSGA034521-PA (46)
| | | \-100+
| | /-57-+ | /----- BGIOSGA034522-PA (24)
| | | | \-100+
| | | | \----- BGIOSGA038821-PA (33)
| | | |
/-99-+ | | \--------------------- BGIOSGA035598-PA (38)
| | \-99-+
| | | /----- BGIOSGA019760-PA (13)
| | | /-87-+
| | | | \----- BGIOSGA019758-PA (57)
| | \-------86------+
| | | /----- BGIOSGA005161-PA (45)
| | \-100+
| | \----- BGIOSGA022538-PA (62)
| |
| | /----- BGIOSGA036912-PA (14)
| | /-100+
| | | \----- BGIOSGA034703-PA (32)
| | /-100+
| | | \---------- BGIOSGA025964-PA (30)
| \-----------100-----------+
| \--------------- BGIOSGA020074-PA (51)
|
/-100-+ /----- BGIOSGA008763-PA (12)
| | /-100+
| | | \----- BGIOSGA008764-PA (22)
| | /-100+
| | | \---------- BGIOSGA016901-PA (41)
| | |
| | /-100-+ /----- BGIOSGA031446-PA (15)
| | | | /-100+
| | | | | \----- BGIOSGA011665-PA (49)
| | | \-52-+
| | /-58-+ \---------- BGIOSGA022141-PA (56)
| | | |
| | | | /----- BGIOSGA037038-PA (21)
| | /-87-+ \------100------+
| | | | \----- BGIOSGA034855-PA (48)
| | | |
| | | \-------------------------- BGIOSGA012273-PA (63)
| \------79------+
| | /----- BGIOSGA013482-PA (17)
/-100+ | /-70-+
| | | | \----- BGIOSGA015085-PA (35)
| | \---------93---------+
| | | /----- BGIOSGA023255-PA (19)
| | \-100+
| | \----- BGIOSGA006948-PA (20)
| |
| | /----- BGIOSGA014504-PA (6)
| | /---------100--------+
| | | \----- BGIOSGA005839-PA (34)
| | |
| | | /--------------- BGIOSGA025902-PA (9)
| | | |
| | /-100+ | /----- BGIOSGA032058-PA (25)
| | | | /-100-+ /-100+
| | | | | | | \----- BGIOSGA012030-PA (40)
| | | | | \-88-+
| | | \-100+ \---------- BGIOSGA026022-PA (43)
| | | |
| \---------93---------+ \--------------------- BGIOSGA000383-PA (39)
/-55-+ |
| | | /----- BGIOSGA010480-PA (11)
| | | /---100---+
| | | | \----- BGIOSGA026037-PA (26)
| | | |
| | \------100------+ /----- BGIOSGA020123-PA (28)
| | | /-100+
| | | | \----- BGIOSGA026051-PA (53)
| | \-99-+
| | \---------- BGIOSGA010551-PA (44)
| |
| | /--------------- BGIOSGA010017-PA (7)
--55-+ | |
| | | /----- BGIOSGA018950-PA (16)
| | /-100-+ /-97-+
| | | | | \----- BGIOSGA018951-PA (23)
| | | \-100+
| | /-84-+ \---------- BGIOSGA013074-PA (60)
| | | |
| \--------------99--------------+ \--------------------- BGIOSGA004778-PA (59)
| |
| \-------------------------- BGIOSGA017023-PA (58)
|
\-------------------------------------------------------------- BGIOSGA037646-PA (27)
Root part of tree:
/------------------------------------------------------------------- BGIOSGA035742-PA (1)
|
|------------------------------------------------------------------- BGIOSGA035741-PA (8)
|
| /---------------------------------------- (117)
| |
+ | /------------- BGIOSGA035745-PA (31)
| /-----100-----+ /-----100-----+
| | | | \------------- BGIOSGA035744-PA (61)
| | \-----55-----+
| | | /------------- BGIOSGA034760-PA (36)
\-----100----+ \-----100-----+
| \------------- BGIOSGA036958-PA (42)
|
\------------------------------------------------------ BGIOSGA035743-PA (3)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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