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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Oryza sativa subsp. japonica
GRAS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 115:
/----- LOC_Os11g04570.1/71-350 (2)
/-100+
| \----- LOC_Os12g04370.1/169-476 (43)
/-51-+
| \---------- LOC_Os12g04370.1/20-127 (25)
/--92-+
| | /----- LOC_Os11g04590.1/3-434 (41)
| \---100---+
/-93-+ \----- LOC_Os12g04380.1/3-438 (64)
| |
| | /----- LOC_Os12g04370.1/529-966 (35)
| \------100------+
| \----- LOC_Os11g04570.1/406-843 (39)
/-95-+
| | /----- LOC_Os05g31380.1/127-506 (24)
| | /-98-+
| | | \----- LOC_Os05g31420.1/157-558 (50)
| \------100------+
| | /----- LOC_Os01g71970.1/50-437 (49)
| \-100+
| \----- LOC_Os06g10900.1/29-167 (51)
|
/------70------+ /----- LOC_Os05g49930.1/78-454 (7)
| | /-100+
| | | \----- LOC_Os01g45860.1/86-449 (52)
| |---------100--------+
| | \---------- LOC_Os03g49990.1/241-621 (42)
| |
| | /----- LOC_Os06g03710.1/217-594 (17)
| | |
| | |----- LOC_Os07g16330.1/170-224 (18)
| \------------98-----------+
| |----- LOC_Os04g37440.1/2-66 (32)
| |
| \----- LOC_Os03g37900.1/38-134 (62)
|
| /----- LOC_Os07g39820.1/193-601 (3)
| /---100---+
| | \----- LOC_Os03g31880.1/189-602 (53)
| |
| /------100------+ /----- LOC_Os07g40020.1/77-470 (10)
| | | /-100+
| | | | \----- LOC_Os05g42130.1/37-423 (28)
| | \-95-+
| | \---------- LOC_Os03g29480.1/134-520 (21)
| |
| | /--------------- LOC_Os07g36170.1/202-570 (4)
| | |
| /----61---+ | /----- LOC_Os10g22430.1/171-540 (19)
| | | /-100-+ /-100+
| | | | | | \----- LOC_Os03g09280.1/167-535 (63)
| | | | \-93-+
| | | /-100+ \---------- LOC_Os07g39470.1/174-543 (45)
| | | | |
| | | | \--------------------- LOC_Os01g65900.1/184-553 (56)
| | \-100+
| | | /---------- LOC_Os04g49110.1/262-619 (5)
| | | |
| | \------100------+ /----- LOC_Os02g45760.1/254-618 (26)
| | \-99-+
| | \----- LOC_Os02g21685.1/63-116 (60)
| |
| | /----- LOC_Os11g04400.1/339-541 (8)
| | /-55-+
| | | \----- LOC_Os12g04200.1/167-546 (20)
| | /-98-+
| | | \---------- LOC_Os11g04400.1/199-346 (46)
/--67-+ | /--52-+
| | | | | /----- LOC_Os11g47910.1/216-585 (22)
| |-55-+ | \---100---+
| | | | \----- LOC_Os11g47920.1/214-583 (34)
| | | |
| | | | /---------- LOC_Os11g47870.1/304-682 (27)
| | | /-52-+ |
| | | | |----100---+ /----- LOC_Os11g11600.1/3-120 (40)
| | | | | \-100+
| | | | | \----- LOC_Os11g47890.1/258-633 (59)
| | | /-52-+ |
| | | | | \--------------------- LOC_Os11g47900.1/264-638 (37)
| | | | |
| | | | \-------------------------- LOC_Os12g38490.1/358-730 (55)
| | | |
| | | | /---------- LOC_Os03g48450.1/356-727 (13)
| | | | |
| | | /-92-+---------81---------+ /----- LOC_Os03g40080.1/434-663 (58)
| | | | | \-66-+
| | | | | \----- LOC_Os03g40080.1/360-429 (66)
| | | | |
| | | | |------------------------------- LOC_Os04g50060.1/262-634 (23)
| | \-51-+ |
| | | \------------------------------- LOC_Os01g62460.1/444-813 (36)
/-58-+ | |
| | | | /----- LOC_Os01g67670.1/72-274 (9)
| | | \--------------100-------------+
| | | \----- LOC_Os01g67650.1/157-531 (44)
| | |
| | | /----- LOC_Os12g02870.1/293-653 (12)
| | | /-100+
| | | | \----- LOC_Os11g03110.1/284-644 (33)
| | | /-100+
| | | | \---------- LOC_Os07g38030.1/69-434 (29)
| | |--------------100-------------+
| | | \--------------- LOC_Os05g40710.1/117-484 (16)
| | |
| | | /----- LOC_Os02g10360.1/41-420 (14)
/-100+ | |-------------------100------------------+
| | | | \----- LOC_Os06g40780.1/276-662 (48)
| | | |
| | | |---------------------------------------------- LOC_Os03g51330.1/209-578 (15)
| | | |
| | | |---------------------------------------------- LOC_Os11g31100.1/401-771 (30)
| | | |
| | | \---------------------------------------------- LOC_Os04g35250.1/86-495 (31)
| | |
--97-+ | \---------------------------------------------------- LOC_Os03g15680.1/132-525 (54)
| |
| | /----- LOC_Os12g06540.1/308-459 (6)
| | |
| \-------------------------69------------------------+----- LOC_Os12g06540.1/175-306 (38)
| |
| \----- LOC_Os11g06180.1/48-391 (61)
|
\-------------------------------------------------------------- LOC_Os06g01620.1/126-479 (11)
Root part of tree:
/------------------------------------------------------------------- LOC_Os04g46860.1/354-710 (1)
|
| /--------------------------------- LOC_Os02g44370.1/357-714 (47)
|---------------100---------------+
+ \--------------------------------- LOC_Os02g44360.1/351-708 (65)
|
| /--------------------------------- (115)
\---------------100---------------+
\--------------------------------- LOC_Os10g40390.1/36-369 (57)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
/------------------------------------------------------------------- LOC_Os12g38490.1 (1)
|
| /------- LOC_Os07g39470.1 (2)
| /---52--+
| | \------- LOC_Os07g36170.1 (52)
| /--100-+
| | | /------- LOC_Os03g09280.1 (9)
| | \--100--+
| /---66--+ \------- LOC_Os10g22430.1 (28)
| | |
| | \---------------------- LOC_Os01g65900.1 (38)
| /--100-+
| | | /--------------- LOC_Os04g49110.1 (10)
| | | |
| | \------100-----+ /------- LOC_Os02g45760.1 (12)
| | \--100--+
| | \------- LOC_Os02g21685.1 (48)
| /------55------+
| | | /------- LOC_Os07g39820.1 (11)
| | | /------100-----+
| | | | \------- LOC_Os03g31880.1 (33)
| | | |
| | \------100-----+ /------- LOC_Os07g40020.1 (23)
| | | /--100--+
| | | | \------- LOC_Os05g42130.1 (42)
| | \--98--+
| | \--------------- LOC_Os03g29480.1 (41)
| |
| | /------- LOC_Os05g31380.1 (3)
| | /----------99----------+
| | | \------- LOC_Os05g31420.1 (50)
| | |
| | | /------- LOC_Os01g71970.1 (14)
| | /--100-+ /------100-----+
| | | | | \------- LOC_Os06g10900.1 (60)
| | | | |
| | | \---56--+ /------- LOC_Os11g04570.1 (17)
| | | | /--100--+
| | | | | \------- LOC_Os12g04370.1 (30)
| | | \--100-+
| | | | /------- LOC_Os12g04380.1 (26)
| | /---53--+ \--100--+
| /---97--+ | | \------- LOC_Os11g04590.1 (40)
| | | | |
| | | | | /------- LOC_Os11g03110.1 (13)
| | | | | /--100--+
| | | | | | \------- LOC_Os12g02870.1 (21)
| | | | | /--100-+
| | | | | | \--------------- LOC_Os07g38030.1 (27)
| | | | \------100-----+
| | | | \---------------------- LOC_Os05g40710.1 (51)
| | | |
| | | | /------- LOC_Os04g35250.1 (4)
| | | |------------------83-----------------+
| | | | \------- LOC_Os04g37440.1 (5)
| | | |
+ | | | /------- LOC_Os01g45860.1 (6)
| | | | /--100--+
| | | | | \------- LOC_Os05g49930.1 (32)
| | | | /--100-+
| | | | | \--------------- LOC_Os03g49990.1 (15)
| | | |----------70----------+
| | | | \---------------------- LOC_Os11g31100.1 (31)
| | | |
| | | | /--------------- LOC_Os03g15680.1 (7)
| | | | |
| | | | /----------75---------+ /------- LOC_Os12g06540.1 (29)
| | \--56--+ | \--100--+
| | | | \------- LOC_Os11g06180.1 (58)
| | | |
| | | | /--------------- LOC_Os04g46860.1 (34)
|--78--+ |---54--+ |
| | | | /--100-+ /------- LOC_Os02g44360.1 (36)
| | | | | \--100--+
| | | | /---51--+ \------- LOC_Os02g44370.1 (43)
| | | | | |
| | | \--100-+ \---------------------- LOC_Os10g40390.1 (55)
| | | |
| | | \------------------------------ LOC_Os06g01620.1 (45)
| | |
| | | /------- LOC_Os03g37900.1 (8)
| | | /---68--+
| | | | \------- LOC_Os07g16330.1 (59)
| | |--------------69-------------+
| | | \--------------- LOC_Os06g03710.1 (19)
| | |
| | | /------- LOC_Os06g40780.1 (16)
| | | /--100--+
| | | | \------- LOC_Os02g10360.1 (47)
| | |-------------100-------------+
| | | \--------------- LOC_Os03g51330.1 (24)
| | |
| | | /------- LOC_Os01g67670.1 (25)
| | \-----------------100-----------------+
| | \------- LOC_Os01g67650.1 (39)
| |
| | /--------------- LOC_Os01g62460.1 (44)
| | |
| | /--97--+ /------- LOC_Os03g40080.1 (49)
| | | \--100--+
| \------------------95-----------------+ \------- LOC_Os03g48450.1 (56)
| |
| \---------------------- LOC_Os04g50060.1 (53)
|
| /------- LOC_Os11g04400.1 (18)
| /--100--+
| | \------- LOC_Os12g04200.1 (37)
| /------86------+
| | | /------- LOC_Os11g47910.1 (20)
| | \---99--+
| | \------- LOC_Os11g47920.1 (35)
| |
\-----------------78-----------------+ /------- LOC_Os11g47890.1 (22)
| /---99--+
| | \------- LOC_Os11g11600.1 (57)
| /--99--+
| | \--------------- LOC_Os11g47870.1 (46)
\--100--+
\---------------------- LOC_Os11g47900.1 (54)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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