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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Raphanus sativus
GRAS Family| Phylogenetic tree for domain ? help Back to Top |
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Subtree rooted at node 112:
/--------------- Rsa1.0_01272.1_g00004.1/250-626 (2)
|
| /---------- Rsa1.0_03809.1_g00002.1/322-698 (13)
/-100-+ |
| | |---------- Rsa1.0_03809.1_g00003.1/312-570 (18)
| \-100+
| | /----- Rsa1.0_00936.1_g00003.1/341-719 (35)
| \-60-+
/-99-+ \----- Rsa1.0_03809.1_g00003.1/569-654 (42)
| |
| | /---------- Rsa1.0_00009.1_g00045.1/387-757 (11)
| | |
/-100+ \----100---+ /----- Rsa1.0_01272.1_g00005.1/341-710 (26)
| | \-100+
| | \----- Rsa1.0_00159.1_g00036.1/344-717 (29)
| |
/------100-----+ \-------------------------- Rsa1.0_03967.1_g00001.1/294-663 (39)
| |
| | /---------- Rsa1.0_01945.1_g00004.1/197-571 (30)
| | |
| \---------100--------+ /----- Rsa1.0_01430.1_g00012.1/234-604 (46)
| \-100+
| \----- Rsa1.0_03378.1_g00001.1/195-565 (51)
|
| /---------- Rsa1.0_01442.1_g00001.1/131-291 (3)
| |
| /-99-+ /----- Rsa1.0_19218.1_g00001.1/1-224 (15)
| | \-99-+
| | \----- Rsa1.0_01285.1_g00014.1/175-538 (44)
| /-----------100-----------+
| | | /---------- Rsa1.0_01442.1_g00001.1/292-459 (22)
| | | |
| | \-99-+ /----- Rsa1.0_00118.1_g00012.1/220-580 (43)
| | \-100+
| | \----- Rsa1.0_00724.1_g00003.1/210-570 (47)
| |
| | /----- Rsa1.0_01244.1_g00008.1/273-632 (4)
| | /---100---+
| | | \----- Rsa1.0_01514.1_g00004.1/232-589 (49)
| | |
|-100+ /---------100--------+ /----- Rsa1.0_02701.1_g00001.1/41-96 (7)
| | | | /-100+
| | | | | \----- Rsa1.0_04207.1_g00001.1/27-82 (8)
| | | \-100+
| | | \---------- Rsa1.0_00350.1_g00007.1/39-396 (10)
| | |
| | | /----- Rsa1.0_30641.1_g00001.1/39-232 (12)
| | | /-99-+
| | | | \----- Rsa1.0_06830.1_g00003.1/237-430 (24)
| | | /-52-+
| | | | \---------- Rsa1.0_06996.1_g00001.1/155-497 (37)
| \-97-+ /-100-+
| | | \--------------- Rsa1.0_06830.1_g00003.1/434-505 (25)
| | /----65---+
| | | | /----- Rsa1.0_01556.1_g00002.1/13-338 (20)
/-100-+ | | \-------98------+
| | | | \----- Rsa1.0_03359.1_g00001.1/103-475 (27)
| | | |
| | | | /----- Rsa1.0_00037.1_g00020.1/125-489 (19)
| | | | /------100------+
| | | | | \----- Rsa1.0_02830.1_g00004.1/124-488 (31)
| | \-85-+ |
| | | | /----- Rsa1.0_01094.1_g00004.1/236-601 (23)
| | | /-100+ /-100+
| | | | | | \----- Rsa1.0_01373.1_g00003.1/239-595 (34)
| | | | | /-100+
| | | | | | \---------- Rsa1.0_00693.1_g00004.1/224-587 (28)
| | | | \-100-+
| | | | \--------------- Rsa1.0_03244.1_g00001.1/208-574 (54)
| | \-86-+
| | | /---------- Rsa1.0_00778.1_g00015.1/52-441 (32)
| | | |
| | | /-100+ /----- Rsa1.0_00658.1_g00003.1/52-433 (38)
| | | | \-100+
| | | | \----- Rsa1.0_03795.1_g00002.1/54-441 (53)
| | \----55----+
| | | /----- Rsa1.0_01006.1_g00012.1/259-631 (45)
| | \---100---+
| | \----- Rsa1.0_00866.1_g00005.1/274-645 (50)
/-55-+ |
| | | /----- Rsa1.0_02123.1_g00006.1/128-498 (5)
| | | /-96-+
| | | | \----- Rsa1.0_05821.1_g00001.1/131-488 (59)
| | | /-100+
| | | | \---------- Rsa1.0_00323.1_g00019.1/125-495 (41)
| | | /--99-+
| | | | | /----- Rsa1.0_05938.1_g00001.1/165-533 (14)
| | | | \---100---+
| | | /-100+ \----- Rsa1.0_00856.1_g00007.1/143-513 (16)
| | | | |
| | | | \--------------------- Rsa1.0_00288.1_g00010.1/148-519 (48)
| | | /-51-+
| | | | | /----- Rsa1.0_00067.1_g00044.1/201-571 (6)
| | | | \---------100--------+
/-100+ | \------100-----+ \----- Rsa1.0_00878.1_g00011.1/164-535 (55)
| | | |
| | | | /----- Rsa1.0_08802.1_g00001.1/60-436 (52)
| | | \-----------100-----------+
| | | \----- Rsa1.0_11966.1_g00001.1/60-231 (58)
| | |
| | | /---------- Rsa1.0_01053.1_g00002.1/145-528 (40)
| | | |
| | | |---------- Rsa1.0_00403.1_g00013.1/140-262 (56)
--100+ | \-------------------100-------------------+
| | | /----- Rsa1.0_00792.1_g00013.1/2-222 (57)
| | \-64-+
| | \----- Rsa1.0_00712.1_g00004.1/145-528 (60)
| |
| \--------------------------------------------------------- Rsa1.0_00032.1_g00025.1/148-513 (33)
|
| /----- Rsa1.0_01791.1_g00001.1/31-220 (9)
\---------------------------63---------------------------+
\----- Rsa1.0_03756.1_g00004.1/2-169 (17)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_41853.1_g00001.1/4-176 (1)
|
|------------------------------------------------------------------- Rsa1.0_01079.1_g00008.1/29-415 (36)
+
| /--------------------------------- (112)
\----------------64---------------+
\--------------------------------- Rsa1.0_75077.1_g00001.1/1-100 (21)
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| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 102:
/---------- Rsa1.0_00693.1_g00004.1 (2)
|
/-100+ /----- Rsa1.0_01094.1_g00004.1 (12)
| \-100+
/-100-+ \----- Rsa1.0_01373.1_g00003.1 (31)
| |
| \--------------- Rsa1.0_03244.1_g00001.1 (18)
/-100+
| | /----- Rsa1.0_00037.1_g00020.1 (33)
| \------100------+
| \----- Rsa1.0_02830.1_g00004.1 (54)
|
/-61-+ /----- Rsa1.0_00658.1_g00003.1 (16)
| | /-98-+
| | | \----- Rsa1.0_03795.1_g00002.1 (30)
| | /-100+
| | | \---------- Rsa1.0_00778.1_g00015.1 (47)
| \----69----+
| | /----- Rsa1.0_00866.1_g00005.1 (28)
/-84-+ \---100---+
| | \----- Rsa1.0_01006.1_g00012.1 (37)
| |
| | /----- Rsa1.0_00724.1_g00003.1 (21)
| | /---100---+
| | | \----- Rsa1.0_00118.1_g00012.1 (56)
| | |
| \------100------+ /----- Rsa1.0_19218.1_g00001.1 (43)
| | /-100+
| | | \----- Rsa1.0_01285.1_g00014.1 (48)
| \-82-+
/-51-+ \---------- Rsa1.0_01442.1_g00001.1 (57)
| |
| | /----- Rsa1.0_01556.1_g00002.1 (5)
| |--------------97--------------+
| | \----- Rsa1.0_03359.1_g00001.1 (40)
| |
| | /----- Rsa1.0_02701.1_g00001.1 (10)
| | /-100+
| | | \----- Rsa1.0_04207.1_g00001.1 (23)
| | /-100+
/-100+ | | \---------- Rsa1.0_00350.1_g00007.1 (50)
| | \---------100--------+
| | | /----- Rsa1.0_01244.1_g00008.1 (15)
| | \---100---+
| | \----- Rsa1.0_01514.1_g00004.1 (19)
| |
| | /----- Rsa1.0_06830.1_g00003.1 (39)
| | /-100+
| | | \----- Rsa1.0_30641.1_g00001.1 (42)
| \--------------100-------------+
/--55-+ \---------- Rsa1.0_06996.1_g00001.1 (41)
| |
| | /----- Rsa1.0_08802.1_g00001.1 (3)
| | /-----------100-----------+
| | | \----- Rsa1.0_11966.1_g00001.1 (22)
| | |
| | | /--------------------- Rsa1.0_00288.1_g00010.1 (4)
| | | |
| | | | /----- Rsa1.0_05938.1_g00001.1 (14)
| \------100-----+ /-100+ /---100---+
| | | | | \----- Rsa1.0_00856.1_g00007.1 (53)
| | | | |
| | | \--68-+ /----- Rsa1.0_02123.1_g00006.1 (35)
| | | | /-86-+
| \-85-+ | | \----- Rsa1.0_00323.1_g00019.1 (44)
| | \-100+
| | \---------- Rsa1.0_05821.1_g00001.1 (38)
| |
/-55-+ | /----- Rsa1.0_00878.1_g00011.1 (36)
| | \---------100--------+
| | \----- Rsa1.0_00067.1_g00044.1 (52)
| |
| | /---------- Rsa1.0_01791.1_g00001.1 (7)
| | |
| | /----100---+ /----- Rsa1.0_75077.1_g00001.1 (11)
| | | | |
| | | \-100+----- Rsa1.0_01079.1_g00008.1 (17)
| | | |
| | | \----- Rsa1.0_41853.1_g00001.1 (45)
| | |
| | | /--------------- Rsa1.0_00403.1_g00013.1 (24)
/-64-+ | /-50-+ |
| | | | |-100-+ /---------- Rsa1.0_00712.1_g00004.1 (25)
| | | | | | |
| | | | | \-81-+ /----- Rsa1.0_01053.1_g00002.1 (27)
| | | | | \-61-+
| | \------------50-----------+ | \----- Rsa1.0_00792.1_g00013.1 (46)
| | | |
| | | \--------------------- Rsa1.0_00032.1_g00025.1 (51)
| | |
--78-+ | \-------------------------- Rsa1.0_03756.1_g00004.1 (32)
| |
| | /---------- Rsa1.0_01945.1_g00004.1 (6)
| | |
| \----------------------100---------------------+ /----- Rsa1.0_03378.1_g00001.1 (9)
| \-100+
| \----- Rsa1.0_01430.1_g00012.1 (49)
|
\-------------------------------------------------------------- Rsa1.0_03967.1_g00001.1 (13)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_00936.1_g00003.1 (1)
|
| /---------------------------------------- (102)
| |
| | /------------- Rsa1.0_00159.1_g00036.1 (8)
| /-----100-----+ /------93-----+
| | | | \------------- Rsa1.0_01272.1_g00005.1 (29)
+ | \-----93-----+
|-----100----+ \--------------------------- Rsa1.0_00009.1_g00045.1 (20)
| |
| \------------------------------------------------------ Rsa1.0_01272.1_g00004.1 (26)
|
| /------------- Rsa1.0_03809.1_g00003.1 (34)
\-------------------------100-------------------------+
\------------- Rsa1.0_03809.1_g00002.1 (55)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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