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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Sorghum bicolor
GRAS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 154:
/----- Sobic.005G046250.1.p/102-456 (2)
/-100+
| \----- Sobic.008G046700.3.p/115-494 (65)
/-------57------+
| \---------- Sobic.001G428600.2.p/125-508 (64)
|
| /----- Sobic.004G291000.2.p/357-560 (13)
| /-100+
/-50-+ | \----- Sobic.004G290800.1.p/358-715 (61)
| | /-100+
| | | \---------- Sobic.006G172900.1.p/362-719 (23)
| | /--91-+
| | | \--------------- Sobic.001G304500.1.p/284-639 (62)
| \-100+
| \--------------------- Sobic.010G003700.1.p/153-512 (83)
|
| /----- Sobic.004G080300.1.p/30-397 (3)
| /-100+
| | \----- Sobic.010G189500.3.p/84-468 (57)
| /----59----+
| | \---------- Sobic.001G109100.1.p/190-559 (26)
| |
| | /----- Sobic.005G029600.1.p/20-475 (10)
| | /-100+
|----57---+ | \----- Sobic.008G012700.1.p/14-427 (16)
| | /-100+
| | | \---------- Sobic.008G012800.2.p/115-569 (27)
| | |
| \-100-+ /----- Sobic.009G117800.1.p/80-473 (38)
| | /-100+
| | | \----- Sobic.009G117700.2.p/35-448 (85)
/---------91---------+ \-100+
| | \---------- Sobic.003G423900.1.p/55-454 (81)
| |
| | /---------- Sobic.001G120900.1.p/245-623 (8)
| | |
| | /-100+ /----- Sobic.008G168400.1.p/86-475 (73)
| | | \-100+
| |-------70------+ \----- Sobic.003G237201.1.p/1-259 (77)
| | |
| | \--------------- Sobic.010G017400.1.p/240-611 (78)
| |
| | /---------- Sobic.002G342800.1.p/75-446 (19)
| | |
| | /-100+ /----- Sobic.005G017500.2.p/343-703 (28)
| | | \-100+
| |------100------+ \----- Sobic.008G023401.1.p/156-519 (49)
| | |
| | \--------------- Sobic.009G177100.1.p/110-481 (36)
| |
| | /----- Sobic.003G392800.1.p/163-536 (25)
| |-----------100-----------+
| | \----- Sobic.005G123000.1.p/44-421 (33)
| |
| \------------------------------- Sobic.006G083201.1.p/2-346 (34)
|
| /----- Sobic.005G229500.1.p/309-680 (4)
| /----78---+
| | \----- Sobic.005G229900.1.p/281-662 (69)
| |
| /--97-+ /---------- Sobic.005G229700.1.p/304-408 (6)
| | | |
| | \-100+ /----- Sobic.005G229700.1.p/415-634 (35)
| | \-73-+
| /--------100--------+ \----- Sobic.005G229600.1.p/400-770 (82)
| | |
| | | /--------------- Sobic.002G316500.2.p/393-763 (40)
| | | |
| | \--74-+ /---------- Sobic.005G230200.1.p/335-712 (44)
| | | |
| | \-100+ /----- Sobic.005G230100.1.p/299-682 (46)
| | \-80-+
| | \----- Sobic.005G230000.1.p/321-701 (76)
| |
| /-50-+ /------------------------------------ Sobic.008G138600.1.p/350-721 (18)
| | | |
| | | | /----- Sobic.009G011000.2.p/245-615 (20)
| | | | /-100+
| | | | | \----- Sobic.001G181100.1.p/247-618 (68)
| | | | /-100+
| | | | | \---------- Sobic.009G011100.2.p/252-622 (32)
| | | | /-100-+
| | | | | | /----- Sobic.009G011200.2.p/363-733 (22)
| | | | | \---100---+
| | \-50-+ | \----- Sobic.009G011300.1.p/355-725 (59)
| | | /-100+
| | | | | /----- Sobic.001G174100.1.p/343-713 (29)
| | | | | /-100+
| | | | | | \----- Sobic.001G174200.1.p/346-716 (56)
/-100+ | | | \----100---+
| | | | /-80-+ | /----- Sobic.001G174300.1.p/370-740 (54)
| | | | | | \-100+
| | | | | | \----- Sobic.001G174500.1.p/305-676 (70)
| | | | | |
| | | \-88-+ \-------------------------- Sobic.001G421900.1.p/359-730 (31)
| | | |
| | | | /----- Sobic.003G352600.1.p/431-800 (51)
| | | \------------64-----------+
| | | \----- Sobic.001G033200.3.p/280-649 (72)
| | |
| | | /----- Sobic.005G230500.2.p/420-486 (5)
| | | /--------------52--------------+
| | | | \----- Sobic.005G230500.2.p/154-414 (75)
| | | |
| | | | /------------------------------- Sobic.005G230600.1.p/242-611 (11)
| |--93-+ | |
| | | | | /--------------- Sobic.005G209300.2.p/120-490 (12)
| | | | | |
| | | | | | /----- Sobic.005G209100.1.p/227-598 (21)
| | | |-84-+ /-100-+ /-68-+
| | |----95---+ | | | | \----- Sobic.005G208950.1.p/239-342 (45)
| | | | | | \-100+
| | | | | /-100+ \---------- Sobic.005G209200.1.p/241-612 (30)
| | | | | | |
| | | | \-96-+ \--------------------- Sobic.005G209000.1.p/247-617 (47)
| | | | |
| | | | \-------------------------- Sobic.005G230800.1.p/258-627 (79)
| | | |
| | | \------------------------------------ Sobic.006G093800.1.p/319-692 (80)
| | |
| | | /----- Sobic.005G230900.1.p/258-631 (9)
| | | /-89-+
| | | | \----- Sobic.006G093700.1.p/245-626 (55)
/-100+ | | /-93-+
| | | | | \---------- Sobic.005G231000.1.p/297-667 (67)
| | | |--------------93--------------+
| | | | \--------------- Sobic.005G230300.2.p/244-636 (71)
| | | |
| | | | /----- Sobic.005G230700.2.p/230-606 (15)
| | | |-------------------88-------------------+
| | | | \----- Sobic.010G115450.1.p/70-167 (39)
| | | |
| | | |---------------------------------------------- Sobic.005G230400.2.p/202-431 (52)
| | | |
| | | | /----- Sobic.002G301800.1.p/449-821 (63)
| | | \-------------------100------------------+
| | | \----- Sobic.005G229400.1.p/350-721 (66)
| | |
| | | /----- Sobic.001G341400.1.p/173-550 (17)
| | | /---100---+
| | | | \----- Sobic.002G372100.1.p/152-535 (42)
| | | |
--100+ | | /--92-+ /---------- Sobic.002G359800.1.p/60-450 (24)
| | | | | |
| | | | \-93-+ /----- Sobic.003G386900.1.p/157-296 (37)
| | | | | |
| | | | \-93-+----- Sobic.003G386900.1.p/41-145 (41)
| | \--------------92--------------+ |
| | | \----- Sobic.009G187500.1.p/33-422 (84)
| | |
| | | /---------- Sobic.001G327900.1.p/368-663 (43)
| | | |
| | \----100---+ /----- Sobic.001G327900.1.p/238-344 (50)
| | \-86-+
| | \----- Sobic.002G357800.1.p/193-597 (60)
| |
| | /----- Sobic.006G188900.1.p/282-652 (14)
| \------------------------100------------------------+
| \----- Sobic.004G281200.1.p/264-629 (74)
|
| /----- Sobic.003G377900.1.p/200-569 (7)
\---------------------------100--------------------------+
\----- Sobic.009G143400.1.p/193-563 (48)
Root part of tree:
/------------------------------------------------------------------- Sobic.002G354900.1.p/177-546 (1)
|
|------------------------------------------------------------------- Sobic.001G472600.1.p/165-535 (53)
+
| /--------------------------------- (154)
\---------------100---------------+
\--------------------------------- Sobic.002G330300.1.p/200-569 (58)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 134:
/----- Sobic.009G117700.2.p (2)
/-100+
| \----- Sobic.009G117800.1.p (43)
/-99-+
| \---------- Sobic.003G423900.1.p (26)
|
/-100-+ /----- Sobic.005G029600.1.p (10)
| | /-100+
| | | \----- Sobic.008G012700.1.p (11)
| \-100+
| \---------- Sobic.008G012800.2.p (61)
/-----------50-----------+
| | /----- Sobic.010G189500.3.p (12)
| | /-100+
| | | \----- Sobic.004G080300.1.p (68)
| \----98----+
| \---------- Sobic.001G109100.1.p (39)
|
| /----- Sobic.005G017500.2.p (7)
| /-100+
| | \----- Sobic.008G023401.1.p (71)
| /-100+
| | \---------- Sobic.002G342800.1.p (44)
| /-100-+
| | \--------------- Sobic.009G177100.1.p (54)
| /------81------+
/--86-+ | \--------------------- Sobic.010G017400.1.p (52)
| | |
| | | /----- Sobic.008G046700.3.p (16)
| | | /-100+
| | | | \----- Sobic.005G046250.1.p (19)
| | /-83-+ /---------84---------+
| | | | | \---------- Sobic.001G428600.2.p (59)
| | | | |
| | | | | /----- Sobic.004G291000.2.p (31)
| | | | | /-100+
| | | | | | \----- Sobic.004G290800.1.p (34)
| | | \-83-+ /-100+
| | | | | \---------- Sobic.006G172900.1.p (57)
| | | | /-100-+
| | | | | \--------------- Sobic.001G304500.1.p (37)
| \-53-+ | /-100+
| | | | \--------------------- Sobic.010G003700.1.p (66)
| | \-53-+
| | \-------------------------- Sobic.006G083201.1.p (79)
| |
| | /----- Sobic.005G123000.1.p (17)
| | /----97---+
| | | \----- Sobic.003G392800.1.p (42)
/-100+ | |
| | \------------55-----------+ /---------- Sobic.001G120900.1.p (24)
| | | |
| | \-100+ /----- Sobic.008G168400.1.p (32)
| | \-100+
| | \----- Sobic.003G237201.1.p (45)
| |
| | /----- Sobic.009G187500.1.p (14)
| | /-100+
| | | \----- Sobic.003G386900.1.p (69)
| | /-100+
| | | \---------- Sobic.002G359800.1.p (81)
| | /--93-+
| | | | /----- Sobic.001G341400.1.p (63)
| | | \---100---+
| | /-99-+ \----- Sobic.002G372100.1.p (70)
| | | |
| | | | /----- Sobic.001G327900.1.p (35)
| | | \------100------+
| | | \----- Sobic.002G357800.1.p (73)
| | |
| | | /---------- Sobic.002G330300.1.p (15)
| \------------70-----------+ |
| | /-100+ /----- Sobic.001G472600.1.p (21)
| | | \-100+
| | | \----- Sobic.002G354900.1.p (78)
| | /-100-+
| | | | /----- Sobic.009G143400.1.p (36)
/-100+ | | \---100---+
| | \-84-+ \----- Sobic.003G377900.1.p (67)
| | |
| | | /----- Sobic.004G281200.1.p (29)
| | \------100------+
| | \----- Sobic.006G188900.1.p (65)
| |
| | /----- Sobic.001G181100.1.p (5)
| | /-100+
| | | \----- Sobic.009G011000.2.p (77)
| | /-100+
| | | \---------- Sobic.009G011100.2.p (62)
| | /-100-+
| | | | /----- Sobic.009G011300.1.p (46)
| | | \---100---+
| | | \----- Sobic.009G011200.2.p (58)
--100+ | /-95-+
| | | | /----- Sobic.001G174200.1.p (23)
| | | | /-100+
| | | | | \----- Sobic.001G174100.1.p (72)
| | | \----100---+
| | /-91-+ | /----- Sobic.001G174300.1.p (25)
| | | | \-100+
| | | | \----- Sobic.001G174500.1.p (80)
| | /-87-+ |
| | | | \-------------------------- Sobic.001G421900.1.p (74)
| | | |
| \---------86---------+ \------------------------------- Sobic.001G033200.3.p (41)
| |
| \------------------------------------ Sobic.003G352600.1.p (56)
|
\-------------------------------------------------------------- Sobic.008G138600.1.p (18)
Root part of tree:
/------------------------------------------------------------------- Sobic.005G229600.1.p (1)
|
|------------------------------------------------------------------- Sobic.005G229700.1.p (22)
|
| /--------------------- (134)
| |
| | /---------- Sobic.005G230900.1.p (4)
| /-----------59-----------+ |
| | | /-100+ /----- Sobic.006G093700.1.p (51)
| | | | \-59-+
| | \-100-+ \----- Sobic.005G231000.1.p (55)
| | |
| | \--------------- Sobic.005G230300.2.p (40)
| |
| | /----- Sobic.005G209100.1.p (6)
| | /-96-+
| | | \----- Sobic.005G209200.1.p (27)
| | /-100+
| | | \---------- Sobic.005G208950.1.p (47)
| | /-100-+
| /-100-+ | \--------------- Sobic.005G209300.2.p (8)
| | | /-100+
| | | | \--------------------- Sobic.005G209000.1.p (76)
+ | | /-100+
| | | | \-------------------------- Sobic.005G230800.1.p (48)
| | | /-70-+
| | | | | /----- Sobic.005G230500.2.p (60)
| | | | \------------63-----------+
| | | /-100+ \----- Sobic.005G230600.1.p (64)
| | | | |
| /-100+ | | \------------------------------------ Sobic.006G093800.1.p (20)
| | | | |
| | | \-99-+ /----- Sobic.005G230700.2.p (30)
| | | | /-100+
| | | | | \----- Sobic.010G115450.1.p (49)
| | | \--------------95--------------+
| | | \---------- Sobic.005G230400.2.p (53)
| | |
| | | /----- Sobic.005G229400.1.p (13)
| /-100+ \----------------------100---------------------+
| | | \----- Sobic.002G301800.1.p (38)
| | |
| | | /----- Sobic.005G230000.1.p (9)
| | | /-100+
| | | | \----- Sobic.005G230200.1.p (50)
| | | /-100+
\-100+ | | \---------- Sobic.005G230100.1.p (28)
| \--------------------72-------------------+
| | /----- Sobic.005G229900.1.p (33)
| \----53---+
| \----- Sobic.002G316500.2.p (75)
|
\-------------------------------------------------------------- Sobic.005G229500.1.p (3)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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