 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Gossypium hirsutum
HD-ZIP Family| Phylogenetic tree for domain ? help Back to Top |
|---|
/------------------------------------------------------------------ Gh_D08G1109/30-84 (1)
|
|------------------------------------------------------------------ Gh_A08G0907/30-83 (78)
|
| /--------------- Gh_D13G2409/24-81 (2)
| |
| |--------------- Gh_D03G1290/27-85 (49)
| |
| |--------------- Gh_D05G0975/26-83 (59)
| |
| |--------------- Gh_A03G0276/27-85 (65)
| /--91--+
| | | /------- Gh_A08G1765/25-83 (91)
| | |---83--+
| | | \------- Gh_D08G2109/25-83 (132)
| | |
| | |--------------- Gh_A13G2011/24-81 (114)
| /--87--+ |
| | | \--------------- Gh_A05G0892/26-83 (149)
| | |
| | |---------------------- Gh_A10G0035/19-77 (22)
| | |
| | \---------------------- Gh_D10G0038/19-77 (98)
| |
| |----------------------------- Gh_D06G0966/20-78 (48)
| |
| | /------- Gh_D07G0220/20-78 (50)
| |---------100---------+
| /---90--+ \------- Gh_A07G0163/20-78 (60)
| | |
| | |----------------------------- Gh_A05G0364/20-78 (55)
| | |
| | | /------- Gh_A05G1085/17-75 (68)
| | |----------78---------+
| | | \------- Gh_D05G1263/17-75 (110)
| | |
| | |----------------------------- Gh_A06G0833/20-78 (94)
| | |
| | \----------------------------- Gh_D05G0479/20-78 (129)
| |
| | /------- Gh_A12G2462/28-83 (5)
| | /---------100---------+
| | | \------- Gh_D12G2590/26-81 (112)
| | |
| | | /------- Gh_A12G1446/84-139 (6)
| | | /---97--+
| /--99--+ | | \------- Gh_D12G1563/95-150 (180)
| | | | |
| | | | |--------------- Gh_A13G0777/56-111 (39)
| | | | |
| | | | |--------------- Gh_D13G2528/56-111 (52)
| | | | |
| | | | /--91--+ /------- Gh_D06G1607/58-113 (71)
| | | | | |---78--+
| | | | | | \------- Gh_A06G1283/62-113 (80)
| | | | | |
| | | | | |--------------- Gh_D02G1338/98-153 (86)
| | | |--100-+ |
| | | | | \--------------- Gh_A03G0957/98-153 (131)
| | | | |
| | | | | /------- Gh_D10G0146/66-121 (19)
| | | | \------100-----+
| | | | \------- Gh_A10G0143/64-119 (57)
| | | |
| | \---97--+ /------- Gh_D07G1441/107-162 (8)
| | | |
| | | |------- Gh_A11G0777/119-174 (15)
| | | |
| | | |------- Gh_A07G1332/107-162 (21)
| | | /------100-----+
| | | | |------- Gh_D11G0906/119-174 (40)
| | | | |
| | | | |------- Gh_D12G1049/122-177 (41)
| | | | |
| | |--99--+ \------- Gh_A12G2601/122-177 (170)
| | | |
| | | | /------- Gh_A09G0391/103-156 (190)
| | | | /--100--+
| | | | | \------- Gh_Sca007830G01/70-123 (127)
| | | \--99--+
| | | \--------------- Gh_A08G2453/80-135 (137)
| | |
| | | /------- Gh_A05G3845/103-158 (47)
| | |----------99---------+
| | | \------- Gh_D05G1246/103-158 (140)
| | |
| | | /------- Gh_D03G1654/77-132 (51)
| | \---------100---------+
| /--57--+ \------- Gh_D03G1655/77-132 (144)
| | |
| | | /------- Gh_A11G0693/140-194 (4)
| | | /---94--+
| | | | \------- Gh_A11G0690/140-194 (35)
| | | |
| | | |--------------- Gh_D11G0807/139-193 (13)
| | | /--100-+
| | | | |--------------- Gh_D11G0809/139-193 (75)
| | | | |
| | | /------100-----+ \--------------- Gh_A11G0692/140-194 (82)
| | | | |
| | | | | /------- Gh_A12G0871/134-188 (79)
| | | | \------98------+
| | | | \------- Gh_D12G0953/134-188 (120)
| | | |
| | | | /------- Gh_D01G1844/159-209 (7)
| | | |--------------72-------------+
| | | | \------- Gh_A01G1616/168-221 (18)
| | | |
| | | | /------- Gh_D05G2980/57-111 (10)
| | | | /---98--+
| | | | | \------- Gh_A05G2682/57-111 (34)
| | | | /------99-----+
| | | | | | /------- Gh_D01G1470/70-124 (12)
| | | | | \---99--+
| | | | | \------- Gh_Sca004718G01/70-124 (77)
| | | | |
| | | | | /------- Gh_D01G1080/105-159 (11)
| | | | | /------100-----+
| | | | | | \------- Gh_A01G1026/106-160 (32)
| | | | | |
+ | | | |--100-+ /------- Gh_D02G0871/112-166 (66)
| | | | | | /---99--+
| | | | | | | \------- Gh_A02G0823/112-166 (145)
| | | | | \--66--+
| | | | | | /------- Gh_A05G1856/106-136 (83)
| | | |---65--+ \--100--+
| | | | | \------- Gh_D05G2054/106-136 (136)
| | | | |
| | | | |----------------------------- Gh_A11G3156/136-190 (38)
| | | | |
| | \--88--+ | /------- Gh_A11G0454/141-195 (64)
| | | | /--100--+
| | | | | \------- Gh_D11G0526/141-195 (121)
| | | |------80-----+
| | | | | /------- Gh_D03G0292/93-147 (93)
| | | | \--100--+
| | | | \------- Gh_A02G1428/93-147 (100)
| | | |
| | | \----------------------------- Gh_A12G0726/136-190 (148)
| | |
| | | /------- Gh_A08G1509/140-194 (25)
| | | /------76------+
| | | | \------- Gh_D08G1807/141-195 (30)
| | | |
| | |------70------+ /------- Gh_A11G2970/126-180 (62)
| | | | /---97--+
| | | | | \------- Gh_D11G0266/126-180 (150)
| | | \--53--+
| | | | /------- Gh_D12G2139/137-191 (126)
| | | \---86--+
| | | \------- Gh_A12G1960/137-191 (142)
| | |
| | |------------------------------------- Gh_D01G1219/162-216 (31)
| | |
| | |------------------------------------- Gh_A09G1204/172-226 (44)
| | |
| | |------------------------------------- Gh_A01G1130/162-217 (63)
| | |
| | | /------- Gh_D04G0859/174-228 (84)
| | |--------------70-------------+
| | | \------- Gh_A04G1376/3-31 (120)
| | |
| | \------------------------------------- Gh_D09G1210/172-226 (123)
| |
| | /--------------- Gh_D01G1287/20-73 (3)
| | |
| | | /------- Gh_A11G1037/20-73 (9)
| | |--100--+
| | | \------- Gh_D13G1514/20-73 (111)
| | |
| | |--------------- Gh_A06G0266/61-114 (24)
| | |
| | | /------- Gh_D08G1853/20-73 (26)
| | | |
| | /--89--+ |------- Gh_D12G0450/17-70 (33)
| | | |---90--+
| | | | |------- Gh_D09G1239/20-73 (46)
| | | | |
| | | | \------- Gh_D10G0770/20-73 (139)
| | | |
| | | |--------------- Gh_D06G0289/61-114 (87)
| /--100--+ | |
| | | | |--------------- Gh_D11G2639/61-114 (88)
| | | | |
| | | | \--------------- Gh_D08G0905/20-73 (117)
| | | |
| | | | /------- Gh_D10G0992/61-114 (20)
| | | | /---97--+
| | | | | \------- Gh_A10G0774/60-113 (56)
| | | | |
| | | /------53------+ | /------- Gh_A11G1855/52-105 (28)
| | | | | |--100--+
| | | | | | \------- Gh_D11G2140/52-105 (76)
| | | | | |
| | | | | |--------------- Gh_A02G1237/58-111 (36)
| | | | |--75--+
| | | | | | /------- Gh_D12G0780/58-111 (45)
| | | | | |---93--+
| | | | | | \------- Gh_A12G0771/58-111 (69)
| | | | | |
| | | | | |--------------- Gh_D03G0374/58-111 (128)
| | | | | |
| | | | | \--------------- Gh_Sca028226G01/62-115 (141)
| | | | |
| | |------68-----+ | /------- Gh_D05G2148/57-110 (81)
| | | | \------89------+
| | | | \------- Gh_A05G1913/57-110 (89)
| | | |
| | | | /------- Gh_A09G0195/79-131 (37)
| | | | /------74------+
| | | | | \------- Gh_Sca073981G01/79-131 (122)
| | | | |
| | | | /--94--+ /--------------- Gh_D04G0457/39-91 (53)
| | | | | | |
| | | | | \--80--+ /------- Gh_D07G2184/67-119 (95)
| | | | | \--100--+
| | | | | \------- Gh_A07G1966/66-119 (119)
| | | | |
| | | \---95--+ /------- Gh_D13G0756/84-137 (61)
| | | | |
| | | | |------- Gh_A05G2636/86-139 (67)
| | | | |
| | | | |------- Gh_D05G2926/86-139 (74)
| | | \----------99---------+
| | | |------- Gh_A13G0639/83-136 (115)
| | | |
| | | |------- Gh_A03G0861/80-133 (124)
| | | |
| | | \------- Gh_D02G2405/80-133 (130)
| | |
| | | /------- Gh_D03G0850/90-143 (14)
| | | /--100--+
| | | | \------- Gh_A03G0571/89-142 (17)
| | |-----------------63----------------+
| | | | /------- Gh_D12G1725/92-145 (73)
| | | \--100--+
| | | \------- Gh_A12G2639/92-145 (113)
| | |
| | | /------- Gh_D11G1879/62-116 (16)
| | | /--100--+
\--76--+ | | \------- Gh_A11G1721/62-116 (70)
| | |
| | /--55--+--------------- Gh_D03G0161/58-112 (27)
| | | |
| | | \--------------- Gh_A02G1563/58-112 (118)
| |-------------100------------+
| | | /------- Gh_D11G0473/49-103 (72)
| | \------85------+
| | \------- Gh_A11G0410/48-103 (135)
| |
| | /------- Gh_A03G1284/44-97 (23)
| |--------------------100--------------------+
| | \------- Gh_D02G1724/43-96 (54)
| |
| | /------- Gh_Sca005979G01/65-118 (43)
| |---------------------97--------------------+
| | \------- Gh_D10G0847/65-118 (125)
| |
| | /------- Gh_D01G0447/14-67 (85)
| | |
| |--------------------100--------------------+------- Gh_D01G0446/14-67 (134)
| | |
| | \------- Gh_A01G0439/14-67 (147)
| |
| | /------- Gh_A01G1802/66-119 (97)
| | /---78--+
| | | \------- Gh_A04G0563/61-114 (133)
| | |
| |-----------------78----------------+--------------- Gh_A01G1801/65-119 (160)
| | |
| | \--------------- Gh_D01G2042/67-120 (110)
| |
| | /------- Gh_A07G0585/96-149 (130)
| \---------------------82--------------------+
| \------- Gh_D07G0654/96-149 (138)
|
|----------------------------------------------------------- Gh_A08G0909/30-84 (29)
|
| /--------------- Gh_A11G0906/30-84 (42)
| |
| | /------- Gh_A07G1237/28-81 (96)
| /--99--+--100--+
| | | \------- Gh_D07G1346/28-81 (99)
| | |
| | \--------------- Gh_D11G1052/30-84 (116)
| /--100-+
| | | /------- Gh_D12G2350/123-177 (58)
| | | /--100--+
| | | | \------- Gh_A12G2171/123-177 (140)
| | \--72--+
|--------------91-------------+ | /------- Gh_D12G1152/44-98 (92)
| | \---94--+
| | \------- Gh_A12G1033/21-75 (150)
| |
| | /------- Gh_D11G0153/36-89 (90)
| \---------100---------+
| \------- Gh_A11G0139/36-89 (143)
|
\----------------------------------------------------------- Gh_D08G1112/30-84 (146)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 279:
/----- Gh_D07G0220 (2)
/---100---+
| \----- Gh_A07G0163 (13)
|
/-97-+ /----- Gh_A06G0833 (6)
| | /-100+
| | | \----- Gh_D06G0966 (150)
| \-58-+
| | /----- Gh_A05G0364 (41)
/-97-+ \-100+
| | \----- Gh_D05G0479 (150)
| |
| | /----- Gh_A05G1085 (38)
/-89-+ \------100-----+
| | \----- Gh_D05G1263 (123)
| |
| | /----- Gh_A10G0035 (48)
| \--------100--------+
| \----- Gh_D10G0038 (180)
/--97-+
| | /----- Gh_A13G2011 (61)
| | /------100-----+
| | | \----- Gh_D13G2409 (122)
| | |
| | | /----- Gh_D03G1290 (71)
| \----97---+ /---100---+
| | | \----- Gh_A03G0276 (131)
| | |
| \-97-+ /----- Gh_A08G1765 (79)
| | /-100+
| | | \----- Gh_D08G2109 (127)
| \-97-+
| | /----- Gh_D05G0975 (90)
| \-100+
| \----- Gh_A05G0892 (98)
|
| /---------- Gh_A08G2453 (7)
| |
| /---100---+ /----- Gh_A09G0391 (9)
| | \-100+
| | \----- Gh_Sca007830G01 (54)
| |
/-86-+ /-100+ /----- Gh_D07G1441 (35)
| | | | /---100---+
| | | | | \----- Gh_A07G1332 (134)
| | | | |
| | | \-100+ /----- Gh_D11G0906 (39)
| | | | /-100+
| | | | | \----- Gh_A11G0777 (58)
| | /-89-+ \-97-+
| | | | | /----- Gh_A12G2601 (133)
| | | | \-100+
| | | | \----- Gh_D12G1049 (144)
| | | |
| | | | /----- Gh_A05G3845 (69)
| | | \--------100--------+
| | | \----- Gh_D05G1246 (94)
| | |
| | | /----- Gh_D06G1607 (8)
| | | /-100+
| | | | \----- Gh_A06G1283 (190)
| | | /---100---+
| | | | | /----- Gh_D10G0146 (57)
| | | | \-100+
| | | | \----- Gh_A10G0143 (170)
| \--97-+ |
| | | /----- Gh_D02G1338 (10)
| |---100---+ /-100+
| | | | \----- Gh_A03G0957 (112)
| | | /-100+
| | | | | /----- Gh_A13G0777 (29)
| | | | \-100+
| | \-99-+ \----- Gh_D13G2528 (89)
| | |
| | | /----- Gh_D12G1563 (99)
| | \---100---+
| | \----- Gh_A12G1446 (135)
| |
| | /----- Gh_D03G1654 (11)
| | /-100+
| | | \----- Gh_D03G1655 (140)
| \---------93--------+
| | /----- Gh_A12G2462 (72)
| \-100+
| \----- Gh_D12G2590 (117)
|
/-72-+ /----- Gh_D08G1807 (3)
| | /-100+
| | | \----- Gh_A08G1509 (20)
| | /-91-+
| | | | /----- Gh_D12G2139 (82)
| | | \-100+
| | /---100---+ \----- Gh_A12G1960 (116)
| | | |
| | | | /----- Gh_A11G2970 (124)
| | | \---100---+
| | | \----- Gh_D11G0266 (129)
| | |
| | | /---------- Gh_A11G0693 (21)
| | | |
| | /-89-+ |---------- Gh_D11G0809 (136)
| | | | /-100+
| | | | | | /----- Gh_D11G0807 (139)
| | | | | \-100+
| | | | /-97-+ \----- Gh_A11G0690 (146)
| | | | | |
| | | | | \--------------- Gh_A11G0692 (42)
| | | \-100+
| | | | /----- Gh_A12G0871 (23)
| | | \------100-----+
| | /--66-+ \----- Gh_D12G0953 (130)
| | | |
| | | | /----- Gh_D01G1844 (51)
| | | | /-100+
| | | | | \----- Gh_A01G1616 (85)
| | | | |
| | | | | /----- Gh_A09G1204 (65)
| | | | |-100+
| | | | | \----- Gh_D09G1210 (100)
| | | \---------96--------+
| | | | /----- Gh_D04G0859 (66)
| | | |-100+
| | | | \----- Gh_A04G1376 (121)
| | | |
| | | | /----- Gh_A01G1130 (88)
| | | \-100+
| | | \----- Gh_D01G1219 (142)
| | |
| | | /----- Gh_A05G2682 (5)
| \-88-+ /-100+
| | | \----- Gh_D05G2980 (92)
| |-----------100-----------+
| | | /----- Gh_D01G1470 (125)
| | \-100+
| | \----- Gh_Sca004718G01 (143)
| |
| | /----- Gh_D02G0871 (15)
| | /-100+
| | | \----- Gh_A02G0823 (145)
| | /-97-+
| | | | /----- Gh_D05G2054 (43)
| | | \-100+
| | /-100+ \----- Gh_A05G1856 (67)
| | | |
| | | | /----- Gh_D01G1080 (24)
| | | \---100---+
| | | \----- Gh_A01G1026 (148)
| | |
| \-------88------+ /----- Gh_A11G0454 (50)
/-61-+ | /-100+
| | | | \----- Gh_D11G0526 (118)
| | | /-100+
| | | | | /----- Gh_A11G3156 (55)
| | | | \-100+
| | \-100+ \----- Gh_A12G0726 (83)
| | |
| | | /----- Gh_D03G0292 (84)
| | \---100---+
| | \----- Gh_A02G1428 (132)
| |
| | /----- Gh_D07G1346 (14)
| | /-100+
| | | \----- Gh_A07G1237 (33)
| | /-96-+
| | | | /----- Gh_A11G0906 (34)
| | | \-100+
| | /-100+ \----- Gh_D11G1052 (91)
| | | |
| | | | /----- Gh_D12G1152 (59)
| | | \---100---+
| | | \----- Gh_A12G1033 (120)
| | |
| | /-61-+ /----- Gh_D08G1109 (19)
| | | | /-91-+
| | | | | \----- Gh_A08G0907 (40)
| | | | /-100+
| | | | | | /----- Gh_D08G1112 (49)
| | | | | \-99-+
| | | \-88-+ \----- Gh_A08G0909 (140)
| |---------70---------+ |
| | | | /----- Gh_D11G0153 (28)
| | | \---100---+
| | | \----- Gh_A11G0139 (70)
| | |
| | | /----- Gh_D12G2350 (111)
| | \--------100--------+
| | \----- Gh_A12G2171 (113)
| |
| | /----- Gh_D11G0473 (16)
| | /----80---+
| | | \----- Gh_A11G0410 (110)
| | |
| |--------------100-------------+ /----- Gh_A11G1721 (17)
| | | /-100+
| | | | \----- Gh_D11G1879 (73)
/-93-+ | \-95-+
| | | | /----- Gh_D03G0161 (36)
| | | \-100+
| | | \----- Gh_A02G1563 (141)
| | |
| | | /--------------- Gh_A04G0563 (26)
| | | |
| | | | /----- Gh_D01G2042 (60)
| | |--------------97--------------+ /-100+
| | | | | \----- Gh_A01G1801 (138)
| | | \-99-+
| | | \---------- Gh_A01G1802 (80)
| | |
| | | /----- Gh_D01G0447 (86)
| | | /-88-+
| | | | \----- Gh_D01G0446 (96)
| | \----------------100----------------+
| | \---------- Gh_A01G0439 (114)
| |
| | /----- Gh_A03G0861 (12)
| | /--------100--------+
| | | \----- Gh_D02G2405 (93)
| | |
| | | /---------- Gh_D04G0457 (27)
| | | |
| | | /-78-+ /----- Gh_A09G0195 (119)
| | /-76-+ | \-100+
| | | | | \----- Gh_Sca073981G01 (128)
| | | | /-100+
| | | | | | /----- Gh_D07G2184 (47)
| | | | | \---100---+
| | | \-72-+ \----- Gh_A07G1966 (87)
| |---------99---------+ |
| | | | /----- Gh_A13G0639 (68)
| | | \------100-----+
| | | \----- Gh_D13G0756 (130)
/-93-+ | |
| | | | /----- Gh_D05G2926 (78)
| | | \-----------100----------+
| | | \----- Gh_A05G2636 (160)
| | |
| | | /----- Gh_Sca005979G01 (22)
| | | /--------100--------+
| | | | \----- Gh_D10G0847 (75)
| | | |
| | | | /----- Gh_D02G1724 (30)
| | \------------92-----------+ /------100-----+
| | | | \----- Gh_A03G1284 (77)
| | | |
| | | | /----- Gh_D03G0850 (44)
| | \-100+ /---100---+
| | | | \----- Gh_A03G0571 (64)
| | | |
| | \-90-+ /----- Gh_A12G2639 (46)
| | | /-100+
| | | | \----- Gh_D12G1725 (149)
| | \-100+
| | | /----- Gh_D07G0654 (62)
--90-+ | \-100+
| | \----- Gh_A07G0585 (74)
| |
| | /----- Gh_D12G0780 (4)
| | /------100-----+
| | | \----- Gh_A12G0771 (63)
| | |
| | | /---------- Gh_D03G0374 (18)
| | /-97-+ |
| | | | /-100+ /----- Gh_Sca028226G01 (76)
| | | | | \-100+
| | | | | \----- Gh_A02G1237 (137)
| | | \-53-+
| \--------------100-------------+ | /----- Gh_D11G2140 (31)
| | \---100---+
| | \----- Gh_A11G1855 (37)
| |
| | /----- Gh_D10G0992 (45)
| \--------100--------+
| \----- Gh_A10G0774 (52)
|
| /----- Gh_A05G1913 (95)
\--------------------------100--------------------------+
\----- Gh_D05G2148 (110)
Root part of tree:
/------------------------------------------------------------------ Gh_D09G1239 (1)
|
|------------------------------------------------------------------ Gh_D08G1853 (126)
|
| /----------- Gh_D12G0450 (81)
|--------------------------100-------------------------+
| \----------- Gh_D10G0770 (147)
|
| /--------------------------------- (279)
+ |
| /----97----+ /---------------------- Gh_A06G0266 (25)
| | | |
| | \----100---+ /----------- Gh_D11G2639 (56)
| | \----84----+
| /----100---+ \----------- Gh_D06G0289 (115)
| | |
| | | /----------- Gh_A11G1037 (32)
| | \---------------100--------------+
\----98----+ \----------- Gh_D13G1514 (53)
|
| /----------- Gh_D08G0905 (97)
\--------------------100--------------------+
\----------- Gh_D01G1287 (120)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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