 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Raphanus raphanistrum
HD-ZIP Family| Phylogenetic tree for domain ? help Back to Top |
|---|
/------------------------------------------------------------------- RrC6022_p2/62-115 (1)
|
|------------------------------------------------------------------- RrC1092_p1/61-114 (3)
|
| /------- RrC1897_p1/69-123 (2)
| /-100-+
| | \------- RrC1566_p2/71-125 (6)
| /----------------60---------------+
| | | /------- RrC1659_p1/62-116 (33)
| | \-100-+
| | \------- RrC2640_p2/23-74 (65)
| |
| | /-------------------- RrC17361_p1/62-116 (9)
| | |
| | /---------59--------+ /------------- RrC18890_p1/123-177 (24)
| /--100-+ | | |
| | | | \--74--+ /------- RrC16353_p1/122-176 (34)
| | | | \-100-+
| | | | \------- RrC9240_p1/126-180 (46)
| | | |
| | | | /--------------------------- RrC9430_p1/128-182 (13)
| | | | |
| | \--91--+ | /------- RrC5602_p1/127-181 (23)
| | | | /--97-+
| | | | | \------- RrC6257_p2/134-188 (52)
| | | | /--84--+
| | | /--59-+ | \------------- RrC305_p3/123-177 (72)
| | | | |--100-+
| | | | | \-------------------- RrC5809_p3/112-166 (67)
| | | | |
| | \--99--+ | /------- RrC1693_p2/149-203 (63)
| | | \--------100--------+
| | | \------- RrC8416_p2/95-149 (73)
| | |
| | \--------------------------------- RrC4252_p3/189-243 (50)
| /--97-+
| | | /------------- RrC142_p8/25-71 (4)
| | | |
| | | /--99--+ /------- RrC5949_p1/26-84 (38)
| | | | \--86-+
| | | | \------- RrC3602_p1/25-83 (51)
| | | |
| | | /--50--+-------------------- RrC3081_p3/19-77 (19)
| | | | |
| | | | | /------- RrC974_p5/17-75 (25)
| | | /-100-+ \-----96-----+
| | | | | \------- RrC810_p1/15-73 (44)
| | | | |
| | | | \--------------------------- RrC911_p1/20-78 (39)
| | | |
| | | | /------- RrC13422_p1/28-79 (7)
| | | | /--------100--------+
| | | | | \------- RrC2546_p2/27-79 (37)
| | | | |
| | | | | /------------- RrC4900_p1/60-95 (12)
| | \---------100--------+ | |
| | | | | /------- RrC969_p7/67-123 (28)
| | | | |--93-+
| | | | | \------- RrC2185_p4/65-121 (74)
| | | | /--78--+
| | | | | | /------- RrC3699_p2/63-118 (35)
| | | | | |--52-+
| | | | | | \------- RrC8510_p2/62-117 (68)
| | | | | |
| | | |--58--+ \------------- RrC12371_p1/61-116 (42)
| | \--69-+ |
| | | |-------------------- RrC12745_p1/72-127 (56)
| | | |
| | | \-------------------- RrC7332_p1/94-149 (59)
| | |
| | | /------- RrC450_p2/127-182 (15)
| | | /-100-+
+ | | | \------- RrC3092_p1/51-106 (69)
| | |-----100-----+
| | | | /------- RrC2365_p2/92-147 (49)
| | | \--68-+
| | | \------- RrC5826_p3/50-105 (55)
| | |
| | | /------- RrC1605_p5/25-80 (29)
| | \---------86--------+
| | \------- RrC1476_p2/23-74 (31)
| |
| | /------- RrC17403_p1/75-130 (5)
| | /-----62-----+
| | | \------- RrC2237_p3/78-132 (20)
|--100-+ |
| | /--99--+ /------- RrC8299_p1/65-117 (17)
| | | | /--55-+
| | | | | \------- RrC267_p3/35-88 (60)
| | /-100-+ \--100-+
| | | | \------------- RrC2237_p4/78-130 (30)
| | | |
| |------------80------------+ \--------------------------- RrC1_p11/68-122 (53)
| | |
| | \--------------------------------- RrC342_p9/90-144 (21)
| |
| | /------- RrC4473_p1/79-132 (8)
| | /--98-+
| | | \------- RrC614_p1/78-131 (22)
| | |
| | |------------- RrC19245_p1/52-104 (11)
| | |
| |----------------------88----------------------+------------- RrC11078_p1/114-166 (32)
| | |
| | |------------- RrC1631_p2/95-147 (48)
| | |
| | | /------- RrC1233_p1/73-125 (62)
| | \--99-+
| | \------- RrC7376_p2/74-126 (70)
| |
| | /-------------------- RrC14295_p1/29-82 (10)
| | |
| | | /------- RrC6305_p1/31-83 (27)
| |------------------100------------------+ /--98-+
| | | | \------- RrC4816_p1/31-82 (58)
| | \--63--+
| | \------------- RrC14541_p1/16-68 (66)
| |
| | /------- RrC547_p1/71-124 (16)
| | /-----82-----+
| | | \------- RrC2387_p1/72-125 (71)
| | |
| |-------------------94------------------+ /------- RrC3392_p1/59-112 (40)
| | | /--98-+
| | | | \------- RrC2708_p1/66-119 (45)
| | \--74--+
| | | /------- RrC23998_p1/62-115 (47)
| | \--58-+
| | \------- RrC5542_p2/62-115 (64)
| |
| |------------------------------------------------------------ RrC10936_p1/3-36 (18)
| |
| |------------------------------------------------------------ RrC20516_p1/7-62 (26)
| |
| \------------------------------------------------------------ RrC7304_p1/26-79 (54)
|
| /------- RrC5890_p1/56-109 (14)
| /--97-+
| | \------- RrC42628_p1/4-57 (61)
| /--90--+
| | | /------- RrC1374_p5/68-121 (36)
| | \-100-+
| /--91--+ \------- RrC624_p9/67-120 (43)
| | |
\-------------------93------------------+ \-------------------- RrC131_p10/57-110 (41)
|
\--------------------------- RrC13539_p1/57-110 (57)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 126:
/---------- RrC12371_p1 (3)
|
/-100+ /----- RrC969_p7 (8)
| \-100+
| \----- RrC2185_p4 (38)
|
/-100-+ /----- RrC8510_p2 (4)
| | /-100+
| | | \----- RrC3699_p2 (24)
| \-100+
| \---------- RrC4900_p1 (19)
|
/-58-+ /----- RrC1476_p2 (9)
| | /-100+
| | | \----- RrC1605_p5 (29)
| | /-100+
| | | | /----- RrC2546_p2 (15)
| | | \-100+
| \--98-+ \----- RrC13422_p1 (36)
/-94-+ |
| | \--------------- RrC12745_p1 (37)
| |
| | /----- RrC5826_p3 (12)
| | /-100+
| | | \----- RrC2365_p2 (41)
/-98-+ \-------98------+
| | | /----- RrC450_p2 (60)
| | \-98-+
| | \----- RrC3092_p1 (64)
| |
| \------------------------------- RrC7332_p1 (27)
|
/-98-+ /----- RrC911_p1 (5)
| | /---100---+
| | | \----- RrC3081_p3 (63)
| | |
| | | /---------- RrC3602_p1 (18)
| | | |
| \---------100--------+-100+ /----- RrC142_p8 (33)
| | \-100+
| | \----- RrC5949_p1 (40)
| |
| | /----- RrC974_p5 (21)
| \---100---+
| \----- RrC810_p1 (22)
|
/-66-+ /----- RrC1897_p1 (6)
| | /-100+
| | | \----- RrC1566_p2 (72)
| | /---------100--------+
| | | | /----- RrC1659_p1 (23)
| | | \-100+
| | | \----- RrC2640_p2 (56)
| | |
| | | /----- RrC1693_p2 (11)
| | | /-------55------+
| | | | \----- RrC8416_p2 (53)
| | | |
| | | | /----- RrC6257_p2 (13)
| \----91---+ | /-100+
| | | | \----- RrC5602_p1 (68)
| | | /-100+
/--68-+ | /-68-+ | | /----- RrC305_p3 (32)
| | | | | | \-100+
| | | | |-100-+ \----- RrC5809_p3 (70)
| | | | | |
| | | | | \--------------- RrC9430_p1 (54)
| | | | |
| | | | \--------------------- RrC4252_p3 (65)
| | \-58-+
| | | /----- RrC16353_p1 (30)
| | | /-96-+
| | | | \----- RrC9240_p1 (34)
/-64-+ | | /-100+
| | | | | \---------- RrC18890_p1 (43)
| | | \----97----+
| | | \--------------- RrC17361_p1 (62)
| | |
| | \---------------------------------------------- RrC20516_p1 (46)
| |
| | /----- RrC4816_p1 (28)
/-57-+ | /-96-+
| | | | \----- RrC6305_p1 (67)
| | \-------------------100-------------------+
| | | /----- RrC14295_p1 (52)
| | \-100+
| | \----- RrC14541_p1 (73)
| |
--70-+ \--------------------------------------------------------- RrC10936_p1 (45)
|
| /----- RrC547_p1 (14)
| /---100---+
| | \----- RrC2387_p1 (48)
| |
\----------------------100---------------------+ /----- RrC2708_p1 (25)
| /-100+
| | \----- RrC3392_p1 (47)
\-100+
| /----- RrC23998_p1 (26)
\-100+
\----- RrC5542_p2 (58)
Root part of tree:
/------------------------------------------------------------------- RrC342_p9 (1)
|
| /---------- RrC267_p3 (2)
| /---100--+
| | \---------- RrC8299_p1 (20)
| /----97---+
| | \------------------- RrC2237_p4 (50)
| /---94---+
| | | /---------- RrC17403_p1 (16)
| | \--------97--------+
|-------------100------------+ \---------- RrC2237_p3 (55)
| |
| \-------------------------------------- RrC1_p11 (74)
|
| /---------- (126)
| /------------------51-----------------+
+ | \---------- RrC7304_p1 (69)
| |
| | /---------- RrC614_p1 (7)
| /---72---+ /------------100------------+
| | | | \---------- RrC4473_p1 (10)
| | | |
| | | | /---------- RrC19245_p1 (35)
| | \---100---+ /---59---+
| | | | \---------- RrC1631_p2 (59)
| | | /---100---+
| | | | \------------------- RrC11078_p1 (39)
| | \---100--+
| | | /---------- RrC7376_p2 (61)
| | \--------100-------+
| | \---------- RrC1233_p1 (71)
\----93---+
| /------------------- RrC13539_p1 (17)
| |
| /----99---+ /---------- RrC5890_p1 (51)
| | \---100--+
| /---100--+ \---------- RrC42628_p1 (66)
| | |
| | \----------------------------- RrC131_p10 (44)
| /---100---+
| | | /---------- RrC6022_p2 (31)
| | \------------100------------+
\---100--+ \---------- RrC1092_p1 (42)
|
| /---------- RrC1374_p5 (49)
\-----------------100-----------------+
\---------- RrC624_p9 (57)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|