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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Raphanus sativus
HD-ZIP Family| Phylogenetic tree for domain ? help Back to Top |
|---|
/------------------------------------------------------------------- Rsa1.0_00504.1_g00013.1/78-131 (1)
|
|------------------------------------------------------------------- Rsa1.0_01132.1_g00003.1/79-132 (20)
|
|------------------------------------------------------------------- Rsa1.0_02108.1_g00008.1/78-131 (31)
|
| /------ Rsa1.0_06073.1_g00002.1/59-112 (2)
| /-100+
| | \------ Rsa1.0_02161.1_g00005.1/59-112 (51)
| |
| |----------- Rsa1.0_18670.1_g00001.1/3-56 (61)
| /--92-+
| | |----------- Rsa1.0_34622.1_g00001.1/3-56 (75)
| | |
| /------------------94------------------+ \----------- Rsa1.0_02481.1_g00002.1/61-114 (77)
| | |
| | | /------ Rsa1.0_00073.1_g00023.1/72-125 (54)
| | \----95----+
| | \------ Rsa1.0_01656.1_g00010.1/71-124 (55)
| |
| | /------ Rsa1.0_00008.1_g00061.1/9-64 (3)
| | /-85-+
| | | \------ Rsa1.0_00389.1_g00009.1/27-79 (63)
| | /-------100------+
| | | | /------ Rsa1.0_00062.1_g00027.1/28-79 (50)
| | | \-100+
| | | \------ Rsa1.0_04393.1_g00001.1/27-79 (78)
| | |
| | | /------ Rsa1.0_00220.1_g00012.1/97-151 (5)
| | | /-------72------+
| | | | \------ Rsa1.0_01548.1_g00004.1/113-168 (39)
| | | |
| | | | /----------------- Rsa1.0_01043.1_g00010.1/67-123 (15)
| | |--56-+ |
| | | | | /------ Rsa1.0_00115.1_g00017.1/55-106 (25)
| | | | | /-57-+
| | | | | | \------ Rsa1.0_02611.1_g00001.1/63-118 (79)
| | | \-50-+ |
| | | |--57-+----------- Rsa1.0_01368.1_g00003.1/63-118 (44)
| | | | |
| | /-65-+ | \----------- Rsa1.0_01845.1_g00006.1/62-117 (80)
| | | | |
| | | | \----------------- Rsa1.0_01027.1_g00002.1/61-116 (29)
| | | |
| | | | /------ Rsa1.0_06168.1_g00001.1/36-91 (7)
| | | | /-99-+
| | | | | \------ Rsa1.0_02683.1_g00005.1/36-91 (24)
| | | |-------64-------+
| | | | | /------ Rsa1.0_02923.1_g00002.1/267-318 (18)
| | | | \-99-+
| | | | \------ Rsa1.0_00533.1_g00018.1/20-71 (42)
| | | |
| | | | /------ Rsa1.0_01567.1_g00002.1/45-98 (10)
| | | |----------85---------+
| | /-100-+ | \------ Rsa1.0_00187.1_g00007.1/127-182 (84)
| | | | |
| | | | \---------------------------- Rsa1.0_03235.1_g00002.1/96-151 (43)
| | | |
| | | | /------ Rsa1.0_01086.1_g00002.1/26-84 (4)
| | | | /-75-+
+ | | | | \------ Rsa1.0_13763.1_g00001.1/25-83 (40)
| | | | /--99-+
| | | | | \----------- Rsa1.0_00915.1_g00001.1/25-83 (58)
| | | | |
| | | | |----------------- Rsa1.0_01190.1_g00006.1/20-78 (17)
| | | | |
| | | | | /------ Rsa1.0_03390.1_g00004.1/17-75 (23)
| | | | | /-89-+
| | | \------100------+ | \------ Rsa1.0_00125.1_g00012.1/17-75 (56)
| | | | |
| | | |--80-+----------- Rsa1.0_00017.1_g00136.1/15-73 (62)
| | | | |
| | | | \----------- Rsa1.0_02058.1_g00004.1/15-73 (66)
| | | |
| /-92-+ | \----------------- Rsa1.0_00578.1_g00001.1/19-77 (46)
| | | |
| | | | /------ Rsa1.0_01249.1_g00006.1/158-212 (8)
| | | | /-53-+
| | | /--82-+ | \------ Rsa1.0_03418.1_g00005.1/157-211 (41)
| | | | | /--93-+
| | | | | | \----------- Rsa1.0_03582.1_g00001.1/158-212 (74)
| | | | | |
| | | | | |----------------- Rsa1.0_00816.1_g00023.1/189-243 (9)
| | | | | |
| | | | | | /------ Rsa1.0_09218.1_g00001.1/123-177 (14)
| | | | | | /-54-+
| | | | | | | \------ Rsa1.0_01376.1_g00001.1/113-167 (19)
| | | | | /-66-+--74-+
| | | | | | | | /------ Rsa1.0_01949.1_g00003.1/134-188 (32)
| | | | | | | \-89-+
| | | | | | | \------ Rsa1.0_00326.1_g00023.1/126-180 (70)
| | | | | | |
| | | | | | |----------------- Rsa1.0_41043.1_g00001.1/1-15 (47)
| | | | | | |
| | | | | | \----------------- Rsa1.0_00235.1_g00008.1/122-176 (76)
| | | | | /--86-+
| | | | | | | /----------- Rsa1.0_01012.1_g00001.1/123-177 (27)
| | | | | | | |
| | | | | | |----78----+ /------ Rsa1.0_00792.1_g00007.1/294-348 (52)
| | | | | | | \-96-+
| | | | | | | \------ Rsa1.0_00461.1_g00007.1/126-180 (69)
| | | | | | |
| | | | \----100---+ \---------------------- Rsa1.0_00126.1_g00002.1/111-165 (35)
| | | | |
| | | | | /------ Rsa1.0_00250.1_g00017.1/62-116 (11)
| | | | | /-85-+
| | | | | | \------ Rsa1.0_00238.1_g00014.1/63-115 (38)
| | | | | /--99-+
| | | | | | \----------- Rsa1.0_00118.1_g00022.1/62-114 (21)
| | | | \----64----+
| | | | \----------------- Rsa1.0_01508.1_g00002.1/69-124 (64)
| | | |
| | | | /--------------------------------- Rsa1.0_04136.1_g00001.1/62-115 (13)
| | | /-86-+ |
| | | | | | /------ Rsa1.0_00261.1_g00004.1/68-121 (33)
| | | | | | /-50-+
| | | | | | | \------ Rsa1.0_00176.1_g00016.1/67-120 (37)
| | | | | | /-100-+
| | | | | /--51-+ | \----------- Rsa1.0_29491.1_g00001.1/67-120 (34)
| | | | | | | /-77-+
\--67-+ | | | | | | \----------------- Rsa1.0_00007.1_g00004.1/56-109 (36)
| | | | | | /--80-+
| | | |-100-+ | | \---------------------- Rsa1.0_00037.1_g00022.1/57-110 (82)
| | | | | \-89-+
| | | | | \---------------------------- Rsa1.0_03010.1_g00001.1/57-110 (65)
| | | | |
| | | | \--------------------------------------- Rsa1.0_00254.1_g00001.1/60-113 (45)
| | | |
| | | | /------ Rsa1.0_00335.1_g00022.1/78-130 (16)
| | | | /-90-+
| | | | | \------ Rsa1.0_01663.1_g00005.1/35-88 (28)
| | | | /-100-+
| | | | | \----------- Rsa1.0_05557.1_g00003.1/78-130 (26)
| | | | /-100+
| \--54-+ | | | /------ Rsa1.0_00335.1_g00021.1/78-132 (59)
| | | | \----96----+
| | | /--97-+ \------ Rsa1.0_05735.1_g00002.1/128-183 (67)
| | | | |
| | |-------73-------+ \---------------------- Rsa1.0_02254.1_g00003.1/38-92 (85)
| | | |
| | | \---------------------------- Rsa1.0_02939.1_g00003.1/25-79 (73)
| | |
| | | /------ Rsa1.0_00428.1_g00011.1/7-62 (48)
| | |------------------61------------------+
| | | \------ Rsa1.0_04146.1_g00004.1/24-77 (49)
| | |
| | | /------ Rsa1.0_00609.1_g00006.1/59-112 (53)
| | \------------------99------------------+
| | \------ Rsa1.0_01068.1_g00006.1/66-119 (71)
| |
| | /------ Rsa1.0_02677.1_g00005.1/31-83 (6)
| | /-98-+
| | | \------ Rsa1.0_01748.1_g00004.1/31-82 (12)
| | |
| | | /------ Rsa1.0_00315.1_g00008.1/29-82 (22)
| \------------------100-----------------+-51-+
| | \------ Rsa1.0_00853.1_g00002.1/23-75 (81)
| |
| \----------- Rsa1.0_00064.1_g00008.1/12-65 (83)
|
| /------ Rsa1.0_00609.1_g00011.1/73-125 (30)
| /-100+
| | \------ Rsa1.0_01405.1_g00007.1/108-160 (72)
| |
| |----------- Rsa1.0_00301.1_g00042.1/93-145 (57)
\------------------------88-----------------------+
|----------- Rsa1.0_04287.1_g00002.1/95-147 (60)
|
\----------- Rsa1.0_03249.1_g00001.1/112-164 (68)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 153:
/----- Rsa1.0_04287.1_g00002.1 (2)
/-100+
| \----- Rsa1.0_00301.1_g00042.1 (80)
/-100+
| \---------- Rsa1.0_03249.1_g00001.1 (9)
/-100-+
| | /----- Rsa1.0_00609.1_g00011.1 (18)
| \---100---+
| \----- Rsa1.0_01405.1_g00007.1 (70)
/---100---+
| | /---------- Rsa1.0_00504.1_g00013.1 (36)
| | |
| \----100---+ /----- Rsa1.0_02108.1_g00008.1 (61)
| \-100+
| \----- Rsa1.0_01132.1_g00003.1 (75)
|
| /----- Rsa1.0_01748.1_g00004.1 (5)
| /----99---+
| | \----- Rsa1.0_02677.1_g00005.1 (21)
| |
|------100------+ /----- Rsa1.0_00315.1_g00008.1 (34)
| | /-93-+
| | | \----- Rsa1.0_00064.1_g00008.1 (62)
| \-100+
| \---------- Rsa1.0_00853.1_g00002.1 (35)
|
|------------------------------- Rsa1.0_00428.1_g00011.1 (8)
|
| /----- Rsa1.0_00037.1_g00022.1 (10)
| /-99-+
| | \----- Rsa1.0_03010.1_g00001.1 (37)
| /-99-+
| | \---------- Rsa1.0_00007.1_g00004.1 (44)
| /-100-+
| | | /----- Rsa1.0_00254.1_g00001.1 (17)
| | \---100---+
| | \----- Rsa1.0_04136.1_g00001.1 (68)
|---100---+
| | /---------- Rsa1.0_00261.1_g00004.1 (42)
/------94------+ | |
| | \----100---+ /----- Rsa1.0_29491.1_g00001.1 (64)
| | \-80-+
| | \----- Rsa1.0_00176.1_g00016.1 (83)
| |
| | /----- Rsa1.0_05557.1_g00003.1 (11)
| | /-92-+
| | | \----- Rsa1.0_00335.1_g00022.1 (71)
| | /-99-+
| | | \---------- Rsa1.0_01663.1_g00005.1 (15)
| | /-100-+
| | | | /----- Rsa1.0_05735.1_g00002.1 (23)
| | | \---100---+
| | /-100+ \----- Rsa1.0_00335.1_g00021.1 (66)
| | | |
| |-82-+ \--------------------- Rsa1.0_02254.1_g00003.1 (82)
| | |
| | \-------------------------- Rsa1.0_02939.1_g00003.1 (57)
| |
| | /----- Rsa1.0_01068.1_g00006.1 (25)
| | /-100+
| | | \----- Rsa1.0_00609.1_g00006.1 (84)
| |---------79---------+
| | \---------- Rsa1.0_04146.1_g00004.1 (56)
| |
| | /----- Rsa1.0_01656.1_g00010.1 (38)
| | /------100------+
| | | \----- Rsa1.0_00073.1_g00023.1 (78)
| | |
| | | /----- Rsa1.0_34622.1_g00001.1 (41)
| \---100---+ /-97-+
| | | \----- Rsa1.0_18670.1_g00001.1 (47)
| | /-100+
/-100-+ | | \---------- Rsa1.0_02481.1_g00002.1 (65)
| | \-100-+
| | | /----- Rsa1.0_06073.1_g00002.1 (63)
| | \---100---+
| | \----- Rsa1.0_02161.1_g00005.1 (79)
| |
| | /----- Rsa1.0_03418.1_g00005.1 (6)
| | /-100+
| | | \----- Rsa1.0_03582.1_g00001.1 (58)
| | /------100------+
| | | \---------- Rsa1.0_01249.1_g00006.1 (74)
| | |
| | | /----- Rsa1.0_41043.1_g00001.1 (20)
| | | /-54-+
| | | | \----- Rsa1.0_09218.1_g00001.1 (48)
| | /-100+ /-100+
| | | | | \---------- Rsa1.0_01376.1_g00001.1 (85)
| | | | /-100-+
| | | | | | /----- Rsa1.0_01949.1_g00003.1 (31)
| | | | | \---100---+
| | /-80-+ \-90-+ \----- Rsa1.0_00326.1_g00023.1 (59)
| | | | |
| | | | \--------------------- Rsa1.0_00235.1_g00008.1 (49)
| | | |
| | | \------------------------------- Rsa1.0_00816.1_g00023.1 (29)
| | |
/-100+ | /-51-+ /----- Rsa1.0_00792.1_g00007.1 (16)
| | | | | /-100+
| | | | | | \----- Rsa1.0_00461.1_g00007.1 (77)
| | | | | /-100+
| | | | | | \---------- Rsa1.0_01012.1_g00001.1 (60)
| | | | \---------100--------+
| | | | \--------------- Rsa1.0_00126.1_g00002.1 (69)
| | \-100+
| | | /----- Rsa1.0_00238.1_g00014.1 (24)
| | | /-57-+
| | | | \----- Rsa1.0_00118.1_g00022.1 (43)
| | | /-100+
| | | | \---------- Rsa1.0_00250.1_g00017.1 (45)
| | \-----------100-----------+
| | \--------------- Rsa1.0_01508.1_g00002.1 (28)
| |
| | /----- Rsa1.0_01086.1_g00002.1 (3)
| | /-100+
| | | \----- Rsa1.0_00915.1_g00001.1 (54)
| | /-100+
/-91-+ | | \---------- Rsa1.0_13763.1_g00001.1 (30)
| | | /--70-+
| | | | | /----- Rsa1.0_00578.1_g00001.1 (4)
| | | | \---100---+
| | | | \----- Rsa1.0_01190.1_g00006.1 (50)
| | \--------------100-------------+
| | | /----- Rsa1.0_02058.1_g00004.1 (26)
| | | /-100+
| | | | \----- Rsa1.0_00017.1_g00136.1 (40)
| | \----100---+
| | | /----- Rsa1.0_00125.1_g00012.1 (27)
| | \-100+
| | \----- Rsa1.0_03390.1_g00004.1 (39)
| |
| | /----- Rsa1.0_01845.1_g00006.1 (13)
--100+ | /-100+
| | | \----- Rsa1.0_00115.1_g00017.1 (22)
| | /-100+
| | | | /----- Rsa1.0_02611.1_g00001.1 (46)
| | | \-100+
| \-------------------100-------------------+ \----- Rsa1.0_01368.1_g00003.1 (52)
| |
| | /----- Rsa1.0_01043.1_g00010.1 (55)
| \---100---+
| \----- Rsa1.0_01027.1_g00002.1 (67)
|
| /----- Rsa1.0_00187.1_g00007.1 (14)
| /-100+
| | \----- Rsa1.0_01567.1_g00002.1 (33)
\-------------------------91------------------------+
\---------- Rsa1.0_03235.1_g00002.1 (73)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_06168.1_g00001.1 (1)
|
|------------------------------------------------------------------- Rsa1.0_02683.1_g00005.1 (53)
|
| /--------------------------- (153)
| |
| /-----100----+ /------------- Rsa1.0_00220.1_g00012.1 (12)
| | \-----100-----+
+ | \------------- Rsa1.0_01548.1_g00004.1 (81)
| |
| /-----100-----+ /------------- Rsa1.0_00008.1_g00061.1 (7)
| | | /-----100-----+
| | | | \------------- Rsa1.0_00389.1_g00009.1 (76)
| | \-----100----+
| | | /------------- Rsa1.0_00062.1_g00027.1 (32)
\-----100----+ \-----100-----+
| \------------- Rsa1.0_04393.1_g00001.1 (72)
|
| /------------- Rsa1.0_00533.1_g00018.1 (19)
\-------------------100------------------+
\------------- Rsa1.0_02923.1_g00002.1 (51)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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