PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for
Trifolium pratense
HD-ZIP Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA15597/20-78   (1)
      |                                                                               
      |                                                          /-------- Tp57577_TGAC_v2_mRNA31237/94-148  (2)
      |                                         /-------82-------+                    
      |                                         |                \-------- Tp57577_TGAC_v2_mRNA13490/131-185 (35)
      |                                         |                                     
      |                                         |                /-------- Tp57577_TGAC_v2_mRNA12072/216-270 (3)
      |                                         |                |                    
      |                                         |       /---91---+-------- Tp57577_TGAC_v2_mRNA18858/141-195 (17)
      |                                         |       |        |                    
      |                                         |---68--+        \-------- Tp57577_TGAC_v2_mRNA16534/170-224 (22)
      |                                         |       |                             
      |                                         |       \----------------- Tp57577_TGAC_v2_mRNA30083/108-162 (11)
      |                                         |                                     
      |                        /-------100------+------------------------- Tp57577_TGAC_v2_mRNA34267/145-199 (5)
      |                        |                |                                     
      |                        |                |                /-------- Tp57577_TGAC_v2_mRNA3802/128-182  (12)
      |                        |                |-------61-------+                    
      |                        |                |                \-------- Tp57577_TGAC_v2_mRNA29832/159-213 (15)
      |                        |                |                                     
      |                        |                |                /-------- Tp57577_TGAC_v2_mRNA5571/99-153   (13)
      |                        |                |-------100------+                    
      |                        |                |                \-------- Tp57577_TGAC_v2_mRNA33705/79-130  (31)
      |                        |                |                                     
      |                        |                \------------------------- Tp57577_TGAC_v2_mRNA39620/64-118  (27)
      |                        |                                                      
      |                        |        /--------------------------------- Tp57577_TGAC_v2_mRNA19483/52-106  (6)
      |                /--100--+        |                                             
      |                |       |        |                        /-------- Tp57577_TGAC_v2_mRNA32555/63-117  (8)
      |                |       |        |-----------98-----------+                    
      |                |       |        |                        \-------- Tp57577_TGAC_v2_mRNA5895/59-112   (32)
      |                |       |        |                                             
      |                |       |        |                        /-------- Tp57577_TGAC_v2_mRNA4181/88-141   (9)
      |                |       |        |               /---100--+                    
      |                |       |        |               |        \-------- Tp57577_TGAC_v2_mRNA34400/78-131  (20)
      |                |       |        |       /--100--+                             
      |                |       |        |       |       \----------------- Tp57577_TGAC_v2_mRNA10715/98-150  (29)
      |                |       |        |       |                                     
      |                |       |        |       |------------------------- Tp57577_TGAC_v2_mRNA7986/88-141   (18)
      |                |       \---91---+       |                                     
      +                |                |       |       /----------------- Tp57577_TGAC_v2_mRNA35677/58-110  (21)
      |                |                |       |       |                             
      |                |                |---98--+---70--+        /-------- Tp57577_TGAC_v2_mRNA6454/54-107   (26)
      |                |                |       |       \---92---+                    
      |       /---100--+                |       |                \-------- Tp57577_TGAC_v2_mRNA16537/57-110  (38)
      |       |        |                |       |                                     
      |       |        |                |       |------------------------- Tp57577_TGAC_v2_mRNA39684/99-152  (28)
      |       |        |                |       |                                     
      |       |        |                |       |                /-------- Tp57577_TGAC_v2_mRNA16446/63-114  (30)
      |       |        |                |       \-------100------+                    
      |       |        |                |                        \-------- Tp57577_TGAC_v2_mRNA34777/45-97   (40)
      |       |        |                |                                             
      |       |        |                \--------------------------------- Tp57577_TGAC_v2_mRNA2318/68-121   (24)
      |       |        |                                                              
      |       |        |       /------------------------------------------ Tp57577_TGAC_v2_mRNA27255/19-73   (4)
      |       |        |       |                                                      
      |       |        |       |                                 /-------- Tp57577_TGAC_v2_mRNA4750/62-117   (7)
      |       |        |       |                        /---100--+                    
      |       |        |       |                        |        \-------- Tp57577_TGAC_v2_mRNA4324/105-160  (41)
      |       |        |       |                /---93--+                             
      |---57--+        \---51--+                |       \----------------- Tp57577_TGAC_v2_mRNA8586/70-121   (19)
      |       |                |                |                                     
      |       |                |        /---98--+                /-------- Tp57577_TGAC_v2_mRNA39106/127-182 (10)
      |       |                |        |       |       /---100--+                    
      |       |                |        |       |       |        \-------- Tp57577_TGAC_v2_mRNA1498/119-174  (36)
      |       |                |        |       \---97--+                             
      |       |                \---50---+               |        /-------- Tp57577_TGAC_v2_mRNA11117/55-110  (33)
      |       |                         |               \---97---+                    
      |       |                         |                        \-------- Tp57577_TGAC_v2_mRNA18019/95-150  (34)
      |       |                         |                                             
      |       |                         \--------------------------------- Tp57577_TGAC_v2_mRNA38406/140-179 (23)
      |       |                                                                       
      |       |                                                  /-------- Tp57577_TGAC_v2_mRNA11991/21-79   (14)
      |       |                                         /---67---+                    
      |       |                                         |        \-------- Tp57577_TGAC_v2_mRNA16082/26-84   (16)
      |       \--------------------67-------------------+                             
      |                                                 \----------------- Tp57577_TGAC_v2_mRNA27227/18-75   (39)
      |                                                                               
      |                                                          /-------- Tp57577_TGAC_v2_mRNA36204/19-77   (25)
      \----------------------------53----------------------------+                    
                                                                 \-------- Tp57577_TGAC_v2_mRNA38416/17-75   (37)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 76:

                                                               /---------- Tp57577_TGAC_v2_mRNA8586  (2)
                                                               |                      
                                                          /-100+    /----- Tp57577_TGAC_v2_mRNA4750  (15)
                                                          |    \-100+                 
                                                          |         \----- Tp57577_TGAC_v2_mRNA4324  (26)
                                                          |                           
                                                    /--59-+         /----- Tp57577_TGAC_v2_mRNA39106 (14)
                                                    |     |    /-100+                 
                                                    |     |    |    \----- Tp57577_TGAC_v2_mRNA1498  (21)
                                                    |     \-100+                      
                                               /-56-+          |    /----- Tp57577_TGAC_v2_mRNA18019 (22)
                                               |    |          \-100+                 
                                               |    |               \----- Tp57577_TGAC_v2_mRNA11117 (37)
                                          /-64-+    |                                 
                                          |    |    \--------------------- Tp57577_TGAC_v2_mRNA38406 (30)
                                          |    |                                      
                                          |    \-------------------------- Tp57577_TGAC_v2_mRNA27255 (34)
                                          |                                           
                                          |                         /----- Tp57577_TGAC_v2_mRNA36204 (5)
                                /---100---+                    /-100+                 
                                |         |                    |    \----- Tp57577_TGAC_v2_mRNA38416 (40)
                                |         |               /-96-+                      
                                |         |               |    \---------- Tp57577_TGAC_v2_mRNA15597 (18)
                                |         |               |                           
                                |         \------100------+         /----- Tp57577_TGAC_v2_mRNA11991 (31)
                                |                         |    /-100+                 
                                |                         |    |    \----- Tp57577_TGAC_v2_mRNA16082 (32)
                                |                         \-100+                      
                                |                              \---------- Tp57577_TGAC_v2_mRNA27227 (35)
                                |                                                     
                                |                                   /----- Tp57577_TGAC_v2_mRNA34777 (3)
                                |                         /---100---+                 
                                |                         |         \----- Tp57577_TGAC_v2_mRNA16446 (17)
                                |                         |                           
                                |                   /--78-+         /----- Tp57577_TGAC_v2_mRNA39684 (8)
                                |                   |     |    /-99-+                 
                           /-99-+                   |     |    |    \----- Tp57577_TGAC_v2_mRNA7986  (10)
                           |    |                   |     \-100+                      
                           |    |                   |          \---------- Tp57577_TGAC_v2_mRNA2318  (25)
                           |    |              /-86-+                                 
                           |    |              |    |               /----- Tp57577_TGAC_v2_mRNA16537 (20)
                           |    |              |    |          /-100+                 
                           |    |              |    |          |    \----- Tp57577_TGAC_v2_mRNA6454  (33)
                           |    |              |    \----99----+                      
                           |    |         /-94-+               \---------- Tp57577_TGAC_v2_mRNA35677 (27)
                           |    |         |    |                                      
                           |    |         |    |               /---------- Tp57577_TGAC_v2_mRNA10715 (4)
                           |    |         |    |               |                      
                     /--55-+    |         |    \------100------+    /----- Tp57577_TGAC_v2_mRNA34400 (9)
                     |     |    |    /-99-+                    \-100+                 
                     |     |    |    |    |                         \----- Tp57577_TGAC_v2_mRNA4181  (19)
                     |     |    |    |    |                                           
                     |     |    |    |    |                         /----- Tp57577_TGAC_v2_mRNA5895  (23)
                     |     |    \-86-+    \-----------100-----------+                 
                     |     |         |                              \----- Tp57577_TGAC_v2_mRNA32555 (28)
                /-64-+     |         |                                                
                |    |     |         \------------------------------------ Tp57577_TGAC_v2_mRNA19483 (29)
                |    |     |                                                          
                |    |     |                                        /----- Tp57577_TGAC_v2_mRNA33705 (16)
                |    |     \-------------------100------------------+                 
           /-97-+    |                                              \----- Tp57577_TGAC_v2_mRNA5571  (36)
           |    |    |                                                                
           |    |    \---------------------------------------------------- Tp57577_TGAC_v2_mRNA34267 (39)
           |    |                                                                     
           |    \--------------------------------------------------------- Tp57577_TGAC_v2_mRNA30083 (11)
           |                                                                          
      --100+                                                        /----- Tp57577_TGAC_v2_mRNA16534 (6)
           |                                                   /-100+                 
           |                                                   |    \----- Tp57577_TGAC_v2_mRNA18858 (41)
           |                                              /-100+                      
           |                                              |    \---------- Tp57577_TGAC_v2_mRNA12072 (38)
           \----------------------90----------------------+                           
                                                          \--------------- Tp57577_TGAC_v2_mRNA39620 (12)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA31237 (1)
      |                                                                               
      |------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA13490 (13)
      +                                                                               
      |                     /--------------------------------------------- (76)
      |                     |                                                         
      \---------100---------+                      /---------------------- Tp57577_TGAC_v2_mRNA29832 (7)
                            \----------100---------+                                  
                                                   \---------------------- Tp57577_TGAC_v2_mRNA3802  (24)