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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Brassica oleracea
M-type_MADS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
/------------------------------------------------------------------- XP_013600953.1/10-53 (1)
|
|------------------------------------------------------------------- XP_013594279.1/11-57 (55)
|
|------------------------------------------------------------------- XP_013590890.1/9-59 (64)
|
| /------------ XP_013615131.1/12-60 (2)
| |
| /-100-+ /------ XP_013608519.1/12-60 (30)
| | | |
| | \--62-+------ XP_013608520.1/12-60 (48)
| | |
| /-100-+ \------ XP_013608518.1/12-60 (49)
| | |
| | | /------ XP_013608508.1/11-60 (3)
| /--------89--------+ \----100----+
| | | \------ XP_013608509.1/11-60 (45)
| | |
| | \------------------------ XP_013619814.1/10-58 (21)
| |
| | /------ XP_013588208.1/21-54 (10)
| | /-------100-------+
| | | \------ XP_013589556.1/22-60 (52)
| | |
| | | /------ XP_013591122.1/23-65 (17)
| /--95-+ | |
| | | /-----67-----+ /--58-+------ XP_013592109.1/23-65 (20)
| | | | | | |
| | | | | /--76-+ \------ XP_013615815.1/23-65 (50)
| | | | | | |
| | | | \--95-+ \------------ XP_013591162.1/29-65 (71)
| | | | |
| | | | \------------------ XP_013605329.1/29-70 (31)
| | | |
| | | | /------------------ XP_013633153.1/9-57 (15)
| | \-100-+ |
| | | | /------ XP_013633155.1/16-64 (26)
| | | /-100-+ /--99-+
| | | | | | \------ XP_013633151.1/17-65 (51)
| | | | \--76-+
| | | /--99-+ \------------ XP_013633147.1/18-66 (28)
| | | | |
| | | | \------------------------ XP_013613614.1/6-55 (65)
| | | |
| | \--100-+ /------ XP_013583243.1/23-69 (27)
| | |-----------82----------+
| | | \------ XP_013592561.1/23-68 (62)
| | |
| | \------------------------------ XP_013624242.1/23-60 (36)
| /--58-+
| | | /------ XP_013619903.1/10-50 (6)
| | | /--------99-------+
| | | | \------ XP_013597142.1/43-87 (66)
| | | |
| | | | /------ XP_013617893.1/18-65 (11)
| | | | /-100-+
| | | | | \------ XP_013617909.1/10-57 (39)
| | | | /--99-+
| | | | | \------------ XP_013617898.1/9-52 (72)
| | | |-100-+
| | | | \------------------ XP_013619615.1/10-52 (41)
| | | |
| | | | /------ XP_013584191.1/11-50 (14)
| | | | /--99-+
| | | | | \------ XP_013596119.1/11-50 (75)
| | | /-100-+-----86----+
| | | | | \------------ XP_013596905.1/11-48 (19)
| /--76-+ | | |
| | | | | | /------ XP_013630382.1/11-49 (16)
| | | | | |-------100-------+
| | | | | | \------ XP_013624445.1/11-51 (56)
| | | | | |
| | | | | |------------------------ XP_013584728.1/11-50 (22)
| | | \--------66--------+ |
| | | | |------------------------ XP_013619870.1/1-22 (53)
| | | | |
| | | | |------------------------ XP_013584995.1/10-50 (70)
| | | | |
+ | | | \------------------------ XP_013610078.1/10-51 (77)
| | | |
| | | | /------ XP_013623871.1/10-51 (7)
| | | \-----------99----------+
| | | \------ XP_013608279.1/11-53 (37)
| | |
| | \------------------------------------------------------- XP_013585077.1/10-50 (69)
| |
| | /------ XP_013632661.1/17-62 (5)
| | /--99-+
| | | \------ XP_013639809.1/17-62 (24)
| | /--86-+
| | | | /------ XP_013635683.1/16-62 (18)
| | | \-100-+
| | /-----93----+ \------ XP_013635570.1/17-62 (43)
| | | |
| | | \------------------ XP_013610714.1/16-62 (73)
| | |
| | | /------------ XP_013635263.1/2-51 (8)
| | | |
| | | /-100-+ /------ XP_013610790.1/13-61 (47)
| | | | \--90-+
| | | /-100-+ \------ XP_013638752.1/19-62 (57)
| | | | |
|--59-+ | | \------------------ XP_013639481.1/20-63 (46)
| | |--74-+
| | | | /------ XP_013623370.1/11-57 (29)
| | | \--------99-------+
| | | \------ XP_013633368.1/12-57 (33)
| | |
| | | /------------------------ XP_013610889.1/12-49 (9)
| | | |
| | | |------------------------ XP_013607713.1/11-49 (25)
| | | |
| | | | /------ XP_013588961.1/45-83 (32)
| | /--63--+ | |
| | | | | /--68-+------ XP_013588993.1/23-61 (38)
| | | | | | |
| | | | | | \------ XP_013588958.1/177-216 (40)
| | | |-100-+ /--89-+
| | | | | | | /------ XP_013594963.1/21-55 (35)
| | | | | | \-100-+
| | | | |--90-+ \------ XP_013596955.1/19-53 (44)
| | | | | |
| | | | | \------------------ XP_013601021.1/30-69 (58)
| | | | |
| | | | | /------ XP_013608535.1/12-50 (34)
| | | | \--------74-------+
| | | | \------ XP_013617877.1/21-63 (80)
| | /--89-+ |
| | | | | /------ XP_013604104.1/63-105 (13)
| | | | |-----------93----------+
| | | | | \------ XP_013601822.1/18-59 (59)
| | | | |
| | | | | /------ XP_013589514.1/50-98 (42)
| | | | | |
| | | | \----------100----------+------ XP_013604087.1/51-99 (63)
| | | | |
| | | | \------ XP_013589663.1/35-83 (74)
| \--------51-------+ |
| | | /------------ XP_013619937.1/18-62 (60)
| | | |
| | \-----------84-----------+ /------ XP_013621272.1/14-61 (76)
| | \-100-+
| | \------ XP_013619932.1/14-61 (78)
| |
| | /------ XP_013594287.1/9-57 (54)
| | /-100-+
| | | \------ XP_013594287.1/57-88 (68)
| \--------------62--------------+
| | /------ XP_013614580.1/9-56 (61)
| \-100-+
| \------ XP_013615577.1/9-45 (79)
|
| /------ XP_013594068.1/10-53 (4)
| /--99-+
| | \------ XP_013612000.1/10-53 (67)
\--------------------------51--------------------------+
| /------ XP_013603519.1/9-53 (12)
\--90-+
\------ XP_013603751.1/9-53 (23)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 147:
/----- XP_013588961.1 (2)
/-96-+
| \----- XP_013588958.1 (79)
/-100+
| \---------- XP_013588993.1 (37)
/--99-+
| \--------------- XP_013601021.1 (38)
|
/-84-+ /----- XP_013594963.1 (33)
| | /-100+
| | | \----- XP_013596955.1 (77)
| \----63----+
/-88-+ \---------- XP_013608535.1 (78)
| |
| | /----- XP_013607713.1 (23)
/-100+ \---------100--------+
| | \----- XP_013610889.1 (63)
| |
| \------------------------------- XP_013617877.1 (76)
|
/-60-+ /----- XP_013589663.1 (25)
| | /-100+
| | | \----- XP_013589514.1 (67)
| | /-100+
| | | \---------- XP_013604087.1 (31)
| \---------64---------+
| | /----- XP_013633368.1 (55)
| \---100---+
| \----- XP_013623370.1 (61)
/-61-+
| | /----- XP_013604104.1 (19)
| | /------------99-----------+
| | | \----- XP_013601822.1 (22)
| | |
| | | /----- XP_013632661.1 (26)
| | | /------100------+
| | | | \----- XP_013639809.1 (72)
| \----88---+ |
| | | /----- XP_013619932.1 (39)
| | /-65-+ /-100+
| | | | | \----- XP_013621272.1 (73)
/--68-+ | | | /-100+
| | | | | | \---------- XP_013619937.1 (68)
| | \-100+ \--97-+
| | | \--------------- XP_013610714.1 (57)
| | |
| | | /----- XP_013635683.1 (46)
| | \---------100--------+
| | \----- XP_013635570.1 (58)
| |
| | /--------------- XP_013639481.1 (9)
| | |
| | | /----- XP_013635263.1 (20)
| \--------------86--------------+ /-75-+
| | | \----- XP_013610790.1 (34)
| \-100+
| \---------- XP_013638752.1 (30)
|
| /---------- XP_013584995.1 (3)
| |
| /-99-+ /----- XP_013619870.1 (65)
| | \-100+
| | \----- XP_013610078.1 (75)
| /--61-+
| | | /---------- XP_013584728.1 (29)
| | | |
| | \-100+ /----- XP_013630382.1 (45)
| /-63-+ \-100+
| | | \----- XP_013624445.1 (66)
| | |
| | | /----- XP_013596119.1 (18)
| /-84-+ \------100------+
| | | \----- XP_013584191.1 (36)
| | |
| | | /----- XP_013597142.1 (49)
| | \---------100--------+
| | \----- XP_013619903.1 (69)
| |
| /---100---+ /--------------- XP_013619615.1 (4)
| | | |
| | | | /----- XP_013617909.1 (54)
| | | /-100-+ /-100+
| | | | | | \----- XP_013617893.1 (71)
| | | | \-100+
| | \---100---+ \---------- XP_013617898.1 (64)
| | |
| | \--------------------- XP_013596905.1 (47)
| |
| | /----- XP_013623871.1 (5)
| | /--------------100-------------+
/-57-+ | | \----- XP_013608279.1 (8)
| | | |
| | | | /--------------- XP_013615815.1 (10)
| | | | |
| | | | | /----- XP_013591122.1 (12)
| | | | /-100-+ /-59-+
| | | | | | | \----- XP_013592109.1 (32)
| | | | | \-85-+
| | | | /-100+ \---------- XP_013591162.1 (70)
| | |-100+ | |
| | | | | \--------------------- XP_013605329.1 (17)
| | | | /-88-+
| | | | | | /----- XP_013589556.1 (51)
| | | | | \---------100--------+
| | | | | \----- XP_013588208.1 (59)
| | | | |
| |----100---+ | | /----- XP_013583243.1 (14)
| | | | | /-60-+
| | | \-100+ | \----- XP_013592561.1 (74)
| | | | /----100---+
| | | | | \---------- XP_013624242.1 (35)
| | | | |
| | | | | /----- XP_013633153.1 (21)
| | | | | /-52-+
| | | \---100---+ | \----- XP_013633151.1 (27)
| | | | |
| | | | /-100+---------- XP_013633147.1 (42)
| | | | | |
/-96-+ | | \-100-+ \---------- XP_013633155.1 (50)
| | | | |
| | | | \--------------- XP_013613614.1 (53)
| | | |
| | | |----------------------------------------- XP_013585077.1 (6)
| | | |
| | | | /---------- XP_013615131.1 (7)
| | | | |
| | | | /-100+ /----- XP_013608518.1 (24)
| | | | | | |
| | | | | \-65-+----- XP_013608519.1 (43)
| | | | | |
| | | | /-100-+ \----- XP_013608520.1 (44)
| | | | | |
| | | | | | /----- XP_013608508.1 (13)
--99-+ | | \--------100--------+ \---100---+
| | | | \----- XP_013608509.1 (62)
| | | |
| | | \--------------------- XP_013619814.1 (28)
| | |
| | | /----- XP_013590890.1 (48)
| | \----------------------100---------------------+
| | \----- XP_013594279.1 (60)
| |
| | /----- XP_013614580.1 (15)
| | /-96-+
| | | \----- XP_013615577.1 (40)
| \----------------------97----------------------+
| \---------- XP_013594287.1 (56)
|
\-------------------------------------------------------------- XP_013600953.1 (52)
Root part of tree:
/------------------------------------------------------------------- XP_013603519.1 (1)
|
|------------------------------------------------------------------- XP_013603751.1 (11)
+
| /--------------------------------------------- (147)
| |
\---------100---------+ /---------------------- XP_013612000.1 (16)
\----------100---------+
\---------------------- XP_013594068.1 (41)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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