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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Brassica rapa
M-type_MADS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 122:
/----------------------------------------- XP_009117017.1/11-53 (2)
|
| /---------- XP_009139966.1/17-64 (3)
| |
| /-100+ /----- XP_009139964.1/18-66 (27)
| | \-87-+
| /--96-+ \----- XP_009139952.1/15-63 (66)
| | |
| | \--------------- XP_009130508.1/6-55 (32)
| /-97-+
| | | /----- XP_009112576.1/23-68 (47)
| | \-------84------+
| | \----- XP_009146116.1/25-71 (67)
| |
| | /---------- XP_009147930.1/34-68 (6)
| | |
| | /-53-+ /----- XP_009102741.1/22-53 (16)
| /-100+ | \-70-+
| | | /-100-+ \----- XP_009108472.1/33-68 (23)
| | | | |
| | |-89-+ \--------------- XP_009148218.1/30-70 (69)
| | | |
| | | \--------------------- XP_009114777.1/28-69 (42)
| | |
| /-95-+ \-------------------------- XP_009105602.1/22-60 (28)
| | |
| | | /----- XP_009122225.1/12-60 (20)
| | | /-67-+
| | | | \----- XP_009122909.1/11-60 (72)
| | | /-100+
| | | | \---------- XP_009122908.1/10-59 (73)
| | \-------97------+
| | \--------------- XP_009125647.1/10-60 (62)
| |
| | /---------- XP_009130038.1/3-47 (4)
| | |
| | /-100+ /----- XP_009130040.1/13-50 (5)
| | | \-100+
| | | \----- XP_009130036.1/11-50 (35)
| | /-100-+
| | | | /----- XP_009130046.1/11-53 (43)
| | | \----87---+
/-58-+-63-+ | \----- XP_009130047.1/10-53 (70)
| | | |
| | | | /--------------- XP_009144622.1/10-50 (12)
| | | | |
| | | | | /----- XP_009144110.1/11-51 (18)
| | | | |---100---+
| | | | | \----- XP_009124958.1/11-52 (64)
| | | | |
| | | | |--------------- XP_009147196.1/11-50 (30)
| | | /-95-+ |
| | | | |--88-+--------------- XP_009114607.1/10-51 (41)
| | | | | |
| | | | | |--------------- XP_009123630.1/10-50 (44)
| | | | | |
| | | | | | /----- XP_009103230.1/11-50 (45)
| | | | | | /-99-+
| | | | | | | \----- XP_009115622.1/11-50 (49)
| | \----82---+ | \-80-+
| | | | \---------- XP_009151151.1/11-48 (58)
| | | |
| | | | /----- XP_009151152.1/10-54 (26)
| | | \-------95------+
| | | \----- XP_009129908.1/10-50 (55)
| | |
| | | /----- XP_009132360.1/10-51 (11)
/--60-+ | \---------100--------+
| | | \----- XP_009120397.1/16-58 (24)
| | |
| | | /----- XP_009117586.1/9-53 (10)
| | | |
| | | /-99-+----- XP_009110322.1/9-53 (25)
| | | | |
| | | | \----- XP_009149363.1/9-53 (40)
| | |--------------86--------------+
| | | | /----- XP_009152217.1/10-53 (21)
| | | | |
| | | \-99-+----- XP_009114181.1/10-53 (53)
| | | |
| | | \----- XP_009129262.1/26-69 (68)
| | |
/-60-+ | |----------------------------------------- XP_009136224.1/11-57 (33)
| | | |
| | | \----------------------------------------- XP_009107740.1/9-57 (51)
| | |
| | | /----- XP_009112221.1/13-62 (13)
| | | /-73-+
| | | | \----- XP_009130421.1/18-62 (50)
| | | /-99-+
| | | | \---------- XP_009125010.1/13-62 (38)
| | \--------------100-------------+
| | \--------------- XP_009115284.1/20-63 (61)
| |
| | /----- XP_009126603.1/14-61 (59)
| | /-100+
| | | \----- XP_009126601.1/14-61 (60)
| \--------------------89-------------------+
| \---------- XP_009126602.1/18-62 (71)
|
| /----- XP_009118127.1/18-61 (8)
/-100+------------------------100------------------------+
| | \----- XP_009117096.1/64-106 (46)
| |
| | /----- XP_009134914.1/11-57 (14)
| |------------------------100------------------------+
| | \----- XP_009141468.1/12-57 (52)
| |
| | /----- XP_009140925.1/17-62 (15)
| | /-100+
| | | \----- XP_009103700.1/16-62 (65)
| | /-96-+
| | | | /----- XP_009146101.1/17-62 (54)
| | | \-78-+
| |--------------------88-------------------+ \----- XP_009111620.1/16-62 (56)
--97-+ | |
| | \--------------- XP_009120577.1/16-62 (34)
| |
| | /----- XP_009117708.1/51-99 (17)
| \------------------------100------------------------+
| \----- XP_009104862.1/50-98 (19)
|
| /---------- XP_009113240.1/11-49 (9)
| |
|-------------------------64------------------------+ /----- XP_009123497.1/12-49 (36)
| \-100+
| \----- XP_009123499.1/12-49 (39)
|
| /----- XP_009129850.1/16-55 (31)
\---------------------------66---------------------------+
\----- XP_009122928.1/12-50 (37)
Root part of tree:
/------------------------------------------------------------------- XP_009107578.1/14-53 (1)
|
|------------------------------------------------------------------- XP_009107574.1/14-53 (7)
|
+ /------------------------------------------------------ (122)
| |
| | /------------- XP_009139672.1/18-52 (22)
| | /-----100-----+
\-----100----+ | \------------- XP_009147205.1/14-52 (57)
| /-----100----+
| | | /------------- XP_009151734.1/19-56 (29)
| | \------84-----+
\------88-----+ \------------- XP_009151512.1/22-56 (48)
|
\---------------------------------------- XP_009148220.1/13-51 (63)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 133:
/----- XP_009130046.1 (2)
/---100---+
| \----- XP_009130047.1 (47)
|
/-100-+ /----- XP_009130038.1 (34)
| | /-100+
| | | \----- XP_009130036.1 (46)
/-100+ \-100+
| | \---------- XP_009130040.1 (39)
| |
| \--------------------- XP_009151151.1 (68)
|
/-99-+ /----- XP_009129908.1 (5)
| | /------100------+
| | | \----- XP_009151152.1 (72)
| | |
| | | /---------- XP_009147196.1 (16)
| \-86-+ |
| | /-100+ /----- XP_009144110.1 (60)
| | | \-100+
| | | \----- XP_009124958.1 (65)
/-98-+ \--99-+
| | | /---------- XP_009123630.1 (29)
| | | |
| | \-100+ /----- XP_009114607.1 (32)
| | \-63-+
| | \----- XP_009144622.1 (44)
| |
| | /----- XP_009103230.1 (31)
| \-----------100-----------+
| \----- XP_009115622.1 (69)
|
| /---------- XP_009122909.1 (3)
| |
| /-99-+ /----- XP_009122908.1 (6)
| | \-100+
|---------100--------+ \----- XP_009122225.1 (22)
| |
| \--------------- XP_009125647.1 (30)
|
| /--------------- XP_009148218.1 (13)
| |
| | /----- XP_009102741.1 (27)
/-97-+ /-100-+ /-100+
| | | | | \----- XP_009108472.1 (37)
| | | \-90-+
| | /-99-+ \---------- XP_009147930.1 (53)
| | | |
| | | | /----- XP_009114777.1 (26)
| | | \-------66------+
| | | \----- XP_009105602.1 (59)
| | |
| |---100---+ /----- XP_009112576.1 (15)
| | | /------100------+
| | | | \----- XP_009146116.1 (43)
| | | |
/-65-+ | | | /----- XP_009139966.1 (19)
| | | \-86-+ /-99-+
| | | | | \----- XP_009139952.1 (41)
| | | | /-100+
| | | | | \---------- XP_009139964.1 (73)
| | | \-100-+
| | | \--------------- XP_009130508.1 (52)
| | |
| | | /----- XP_009120397.1 (23)
| | \--------------100-------------+
| | \----- XP_009132360.1 (40)
| |
/--93-+ \----------------------------------------- XP_009117017.1 (21)
| |
| | /--------------------- XP_009136224.1 (8)
| | |
| | | /---------- XP_009149363.1 (18)
| | | |
| | /-63-+ /-100+ /----- XP_009117586.1 (20)
| | | | | \-80-+
| | | | | \----- XP_009110322.1 (33)
| | | | |
| | | \--99-+ /----- XP_009152217.1 (25)
| \---------91--------+ | /-74-+
| | | | \----- XP_009114181.1 (64)
| | \-100+
| | \---------- XP_009129262.1 (38)
| |
| \-------------------------- XP_009107740.1 (12)
|
/-66-+ /----- XP_009151512.1 (4)
| | /---100---+
| | | \----- XP_009151734.1 (57)
| | |
| | /-100-+ /----- XP_009107574.1 (45)
| | | | /-100+
| | | | | \----- XP_009107578.1 (58)
| | | \-100+
| | /-64-+ \---------- XP_009148220.1 (62)
| | | |
| | | | /----- XP_009147205.1 (7)
| | | \------100------+
| | | \----- XP_009139672.1 (61)
| | /-100+
| | | | /--------------- XP_009122928.1 (24)
| | | | |
/-94-+ | | | | /----- XP_009123497.1 (48)
| | | | \----83----+ /-100+
| | \---------100--------+ | | \----- XP_009123499.1 (71)
| | | \-100+
| | | \---------- XP_009113240.1 (49)
| | |
| | \------------------------------- XP_009129850.1 (11)
| |
| | /----- XP_009141468.1 (10)
| | /------100------+
| | | \----- XP_009134914.1 (28)
| | |
| | | /----- XP_009130421.1 (14)
--100+ | | /-56-+
| | | | \----- XP_009125010.1 (70)
| \-----------------50----------------+ /-100+
| | | \---------- XP_009112221.1 (67)
| |--97-+
| | \--------------- XP_009115284.1 (55)
| |
| | /----- XP_009104862.1 (54)
| \------100------+
| \----- XP_009117708.1 (66)
|
| /----- XP_009117096.1 (9)
\---------------------------100--------------------------+
\----- XP_009118127.1 (17)
Root part of tree:
/------------------------------------------------------------------- XP_009140925.1 (1)
|
|------------------------------------------------------------------- XP_009103700.1 (63)
|
| /-------------------------------------------------------- (133)
+ |
| | /---------------------- XP_009126602.1 (35)
| | |
| | /----100---+ /----------- XP_009126601.1 (36)
\----100---+ | \----100---+
| /-----99----+ \----------- XP_009126603.1 (42)
| | |
| | \--------------------------------- XP_009120577.1 (51)
\----51----+
| /----------- XP_009111620.1 (50)
\---------------100---------------+
\----------- XP_009146101.1 (56)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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